BAC Information

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BAC

Clone NameB6Ng01-062M12
Chromosome14 (Build37)
Map Location 110,845,271 - 110,992,453
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062M12.bB6Ng01-062M12.g
ACCDH883072DH883073
length5841,073
definitionDH883072|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M12, 5' end.DH883073|Mus musculus domesticus DNA, BAC clone: B6Ng01-062M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,991,864 - 110,992,453)(110,845,271 - 110,846,368)
sequence
cctgccacttagtatttctagttgtttcttataactgaaaaggttagaat
ataatgctaattttaattaaaattatctaagccaagaaaaatagagtgtt
tttttaaaaattatcattggaataaagaagggaaaggaagcttagttttt
cttctcttttgttttgtgatttagggtgggtggtccaaattagttaatat
ttggaaaacaaaatgatagtaaaaatattccagtaatcaaactaatttaa
tctatttggacttgagagtaccttgataagattctgtgatttaattcaca
gtatattagacagttgggactggctaagatccagtagagattcctcaatt
agaatgtaaattttgaaatagatgaaggatggactatagtgagcatttct
gatgttggaaggtttgagaatgtgggaatagggcttagagccaggaagaa
cgcaagacacaaaccagagccaaagaagaatgagacttgagccaggacta
ttatcaagacactaaggtgaaaggttagcaatgtgggaaacagagatggg
aagcaagtagggaatatgtgggtgtgggttggtg
gaattctagttaggtaaaataaagtatgaatagcaaaataattgaaaaat
tggaaaacaagccatattgtgtgtaatcaaaagcattcatcatgtgtatt
gtgatccaatttaagatatagagtcttagtcatcttagtattttatgtcc
tgtttttactctttctctttttttttttttacttcaattgcatatttcat
gaaaccaggaaaatattggtacattgttatattttctaaacaaaaaactg
aatattttcttcttttaattacaggattcagacctgcatggatatattaa
gatacccccatggcctttatgtacttaaatttgtgtatcataagaacgta
aaagccaggctaacaataaaagaactaattcaagtaactgtgctgttcat
taacagaaaatagaatgtcagatttctaggcttagaaatgtctttttgga
ttttctgagtagctctttatcatttcctgctctaatgtttactaccatgt
aaataatgaaaatttttaaaatgatgcattcatgaaataccatttaatat
caaaatatcttattttctgatagactataacaaagtgatttgatatgaat
tgagtcaacagtcacgttaagggatttggatatagttcaagggtagaatg
ccggcctagcacgtgaaataccctgggtcctctctccagaactgaaaaat
gaaaatgaaaaaagttatgttgaccaccagtaaaagctaaagcttgcctg
aagcataaggacaattcccagtaccagagtaaacacaactagcaatgata
ttcctgaaatctgagtaaaaatttaagtagtagttgtccaaagcaaaaac
aaaaaacaaaacaaaacaacaaacaaaaaacccgacaaaccaaaatatac
ctgaacacaaaacacagatacttcatctggtgataagtaatgtatttgta
tactcattacaaagtgtatcttataagaaatcaacacagttattcaggct
agcaatatacaggatatttttggaaatgtactgggttctatgtgactgac
tatgtacatactatttgtacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110991864_110992453
seq2: B6Ng01-062M12.b_47_636 (reverse)

seq1  CACCAACCCACACCCACATATTCCCTACTTGCTTCCCATCTCTGTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCCACACCCACATATTCCCTACTTGCTTCCCATCTCTGTTTCCC  50

seq1  ACATTGCTAACCTTTCACCTTAGTGTCTTGATAATAGTCCTGGCTCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTAACCTTTCACCTTAGTGTCTTGATAATAGTCCTGGCTCAAGT  100

seq1  CTCATTCTTCTTTGGCTCTGGTTTGTGTCTTGCGTTCTTCCTGGCTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTTCTTTGGCTCTGGTTTGTGTCTTGCGTTCTTCCTGGCTCTAA  150

seq1  GCCCTATTCCCACATTCTCAAACCTTCCAACATCAGAAATGCTCACTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATTCCCACATTCTCAAACCTTCCAACATCAGAAATGCTCACTATA  200

seq1  GTCCATCCTTCATCTATTTCAAAATTTACATTCTAATTGAGGAATCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCCTTCATCTATTTCAAAATTTACATTCTAATTGAGGAATCTCTA  250

seq1  CTGGATCTTAGCCAGTCCCAACTGTCTAATATACTGTGAATTAAATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCTTAGCCAGTCCCAACTGTCTAATATACTGTGAATTAAATCACA  300

seq1  GAATCTTATCAAGGTACTCTCAAGTCCAAATAGATTAAATTAGTTTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTATCAAGGTACTCTCAAGTCCAAATAGATTAAATTAGTTTGATT  350

seq1  ACTGGAATATTTTTACTATCATTTTGTTTTCCAAATATTAACTAATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATATTTTTACTATCATTTTGTTTTCCAAATATTAACTAATTTGG  400

seq1  ACCACCCACCCTAAATCACAAAACAAAAGAGAAGAAAAACTAAGCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCACCCTAAATCACAAAACAAAAGAGAAGAAAAACTAAGCTTCCT  450

seq1  TTCCCTTCTTTATTCCAATGATAATTTTTAAAAAAACACTCTATTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTTTATTCCAATGATAATTTTTAAAAAAACACTCTATTTTTCT  500

seq1  TGGCTTAGATAATTTTAATTAAAATTAGCATTATATTCTAACCTTTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGATAATTTTAATTAAAATTAGCATTATATTCTAACCTTTTCAG  550

seq1  TTATAAGAAACAACTAGAAATACTAAGTGGCAGGGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAAACAACTAGAAATACTAAGTGGCAGGGAATTC  590

seq1: chr14_110845271_110846368
seq2: B6Ng01-062M12.g_66_1138

seq1  GAATTCTAGTTAGGTAAAATAAAGTATGAATAGCAAAATAATTGAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTAGGTAAAATAAAGTATGAATAGCAAAATAATTGAAAAAT  50

seq1  TGGAAAACAAGCCATATTGTGTGTAATCAAAAGCATTCATCATGTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACAAGCCATATTGTGTGTAATCAAAAGCATTCATCATGTGTATT  100

seq1  GTGATCCAATTTAAGATATAGAGTCTTAGTCATCTTAGTATTTTATGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCAATTTAAGATATAGAGTCTTAGTCATCTTAGTATTTTATGTCC  150

seq1  TGTTTTTACTCTTTCTCTTTTTTTTTTTTTACTTCAATTGCATATTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACTCTTTCTCTTTTTTTTTTTTTACTTCAATTGCATATTTCAT  200

seq1  GAAACCAGGAAAATATTGGTACATTGTTATATTTTCTAAACAAAAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGGAAAATATTGGTACATTGTTATATTTTCTAAACAAAAAACTG  250

seq1  AATATTTTCTTCTTTTAATTACAGGATTCAGACCTGCATGGATATATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTTCTTTTAATTACAGGATTCAGACCTGCATGGATATATTAA  300

seq1  GATACCCCCATGGCCTTTATGTACTTAAATTTGTGTATCATAAGAACGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCCCATGGCCTTTATGTACTTAAATTTGTGTATCATAAGAACGTA  350

seq1  AAAGCCAGGCTAACAATAAAAGAACTAATTCAAGTAACTGTGCTGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGGCTAACAATAAAAGAACTAATTCAAGTAACTGTGCTGTTCAT  400

seq1  TAACAGAAAATAGAATGTCAGATTTCTAGGCTTAGAAATGTCTTTTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAAAATAGAATGTCAGATTTCTAGGCTTAGAAATGTCTTTTTGGA  450

seq1  TTTTCTGAGTAGCTCTTTATCATTTCCTGCTCTAATGTTTACTACCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAGTAGCTCTTTATCATTTCCTGCTCTAATGTTTACTACCATGT  500

seq1  AAATAATGAAAATTTTTAAAATGATGCATTCATGAAATACCATTTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGAAAATTTTTAAAATGATGCATTCATGAAATACCATTTAATAT  550

seq1  CAAAATATCTTATTTTCTGATAGACTATAACAAAGTGATTTGATATGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATCTTATTTTCTGATAGACTATAACAAAGTGATTTGATATGAAT  600

seq1  TGAGTCAACAGTCACGTTAAGGGATTTGGATATAGTTCAAGGGTAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAACAGTCACGTTAAGGGATTTGGATATAGTTCAAGGGTAGAATG  650

seq1  CCGGCCTAGCACGTGAAATACCCTGGGTCCTCTCTCCAGAACTGAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCTAGCACGTGAAATACCCTGGGTCCTCTCTCCAGAACTGAAAAAT  700

seq1  GAAAATGAAAAAAGTTATGTTGACCACCAGTAAAAGCTAAAGCTTGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAAAAAGTTATGTTGACCACCAGTAAAAGCTAAAGCTTGCCTG  750

seq1  AAGCATAAGGACAATTCCCAGTACCAGAGTAAACACAACTAGCAATGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAAGGACAATTCCCAGTACCAGAGTAAACACAACTAGCAATGATA  800

seq1  TTCCTGAAATCTGAGTAAAAATTTAAGTAGTAGTTGTCCAAAGCAAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAATCTGAGTAAAAATTTAAGTAGTAGTTGTCCAAAGCAAAAAC  850

seq1  AAAAAACAAAACAAAACAAACAAACAAAAAAACCCGACAAACCAAAATAT  900
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  AAAAAACAAAACAAAAC-AACAAAC-AAAAAACCCGACAAACCAAAATAT  898

seq1  ACCTGAACAACAAAAACACAGATACTTCATCTGGTGATAAGTAAATGTAT  950
      |||||||||   |||||||||||||||||||||||||||||| |||||||
seq2  ACCTGAACA--CAAAACACAGATACTTCATCTGGTGATAAGT-AATGTAT  945

seq1  TTGTATACTCCATTAACAAAAGTTGTTATCTTTATAAGAAAATCAACACA  1000
      ||||||||| |||||   |||||   |||| ||||||| |||||||||||
seq2  TTGTATACT-CATTA--CAAAGT--GTATC-TTATAAG-AAATCAACACA  988

seq1  GTTTATTTCCAGCCTAGCCAAATATACAAGGATATTTTTTGGAAATGTAC  1050
      | |||||  ||| |||||  ||||||| |||||| |||||||||||||||
seq2  G-TTATT--CAGGCTAGC--AATATAC-AGGATA-TTTTTGGAAATGTAC  1031

seq1  TGTGTTCCTATGTGAAACTGAGCTATGTAACATAACTATTTGTACATT  1098
      || ||| |||||||  ||||| |||||| |||| ||||||||||||||
seq2  TGGGTT-CTATGTG--ACTGA-CTATGT-ACAT-ACTATTTGTACATT  1073