BAC Information

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BAC

Clone NameB6Ng01-063H13
Chromosome14 (Build37)
Map Location 73,634,681 - 73,766,199
singlet/doubletdoublet
Overlap geneRb1, P2ry5, Itm2b
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2
Downstream geneLOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063H13.bB6Ng01-063H13.g
ACCDH883554DH883555
length9791,171
definitionDH883554|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H13, 5' end.DH883555|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,765,214 - 73,766,199)(73,634,681 - 73,635,884)
sequence
gaattcatcagtgtgcctgtaccagagtttgcggacagcgatcctgccaa
cattgtgcacgacttcaacaaggtgagccagttccaggattgggaaaaga
gctcagggtctctagtaggagttttacagttttaattttagtagttgcta
aattcttcagtttagggtttagtttgcacttgagagagaggggagggaag
agttggaaactgcaagcgtgcgtctccttccagcactggggaggccaaga
ctataggatgcacaagtttgaggccagcctggtctacgtagtgaagtact
gtctcaaatgagattaacaaaagtagacttaggtccctatccccgaggct
cagccttctcaggcctcgctgcctgggcctcgtctgctgatcccaccgag
ttcttgatttgttgaaattcaagtgatttataagttctaaagctagccca
tcttgtgggtacgattctcagaagctcagtctgtgcatctcaggcctgct
gacccgtccgagacatgtccttctttccagaaactcactgcttatttgga
ccttaacctggacaagtgctacgtgattcctctgaacacttccatcgtta
tgccgcccaaaaacctgctggagctccttattaacattaaggtaccgagt
gtttgctgtgtctaattaaccgtctcttaacattcttggagctcactctt
ctggagtgtagccaagggaattaccaaaacatgtactgaaacttgtgtgt
tgttttctttttatctgtagtgctttaaattttataaataacatacatct
tttaaaaaacattcaaaattgggccggagagatggctcagcagtaaaagc
tcttccggggccagcctgacatcgtgtgctcgtccattaatcccacagtg
gaagggagaactaagcccaggaagtcagcttctgcatccatgctcagcct
atacatactggtgcactgcaccacaacac
gaattcaaggaatctgaagcaaataaaaagcaggaagggaactttgtaga
gcctaattcctttcttttacagccaagaagccagagtccccacaggagca
aaggaaaaggactgaaaaggacaagcagagttctctgctgggagctcttt
gcactgcattttcctactccccgacccccttagaaaaagatgtatagtct
ctttttattgcctacagcacatgctttattcatgcataaagaatctacac
tagtaaaagacagtctagattccttctagatttttctatagagaaaaccc
ttcaagtgtttcagggatttgttttggagaatagcagatagttttggaga
atagctagcaaggcttgaaatcctccttcaaatctgcttcttgtgtgctc
tgagtcatggtgtctcagagttccagaaaggtaggataaaaccagggccc
aaggaaggagatttcaagggccctggagtcagatcctgtgcactaaaatg
gtaaactttactctgcactgaaccatatatagttaatctaccaactgata
atatgcttagctagaattgtagtttgacatttgatgcttttcctaaaaca
aagctaataacaaatgtcctttcgcaactaagtatttttgtcaacaggaa
agcacacacatggatacacatgtgaagatccatagtgcatttcagagctg
aaaggagactttcccggatactcttattacataaaggcaacacatacaca
gttctaaataaaatgtatcagattcctgccatcataaaccttcctttgtg
tctcagactaccatatcgttttattttaccactgtgtaaataaattatta
tttaagattttattttagttaacacttattacatttaaactgaataatgt
ttagaatggatttgtttagatggtgttagagtttcacttaatcacttgct
gggatgctggagtctgagcacaggccctacatggagctcaacactgttca
ctgcaatcttaaagtaaaaccttttgtaagttttttccccctgtgtatgg
tgttttgctcttgttgtcggcactgaatgcacgccagtgctgcagttcag
acgtggtactgatatctctggactgaatacaacgggactgactcatggtc
gtacaataaacctgggccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73765214_73766199
seq2: B6Ng01-063H13.b_45_1023 (reverse)

seq1  GTGTGTGTGTGTGCAAGTGCA-CAGTATGTATAGGCTGAGCATGGATGGC  49
      |||| |||| |||| |||||| ||||||||||||||||||||||||| ||
seq2  GTGT-TGTG-GTGC-AGTGCACCAGTATGTATAGGCTGAGCATGGAT-GC  46

seq1  AGAGGCTGACTTCCTGGGCTTAGTTCTCCCCTTCCACTGTGGGATTAATG  99
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAAGCTGACTTCCTGGGCTTAGTTCT-CCCTTCCACTGTGGGATTAATG  95

seq1  GACGGAGCACACGATGTCAGGCTGGCCCCGGAAAGAGCTTTTACTGCTGA  149
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAC-GAGCACACGATGTCAGGCTGGCCCCGG-AAGAGCTTTTACTGCTGA  143

seq1  GCCATCTCTCCGGCCCAATTTTGAATGTTTTTTTAAAAGATGTATGTTAT  199
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCCATCTCTCCGGCCCAATTTTGAATG-TTTTTTAAAAGATGTATGTTAT  192

seq1  TTATAAAATTTAAAGCACTACAGATAAAAAGAAAACAACACACAAGTTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAATTTAAAGCACTACAGATAAAAAGAAAACAACACACAAGTTTC  242

seq1  AGTACATGTTTTGGTAATTCCCTTGGCTACACTCCAGAAGAGTGAGCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATGTTTTGGTAATTCCCTTGGCTACACTCCAGAAGAGTGAGCTCC  292

seq1  AAGAATGTTAAGAGACGGTTAATTAGACACAGCAAACACTCGGTACCTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTTAAGAGACGGTTAATTAGACACAGCAAACACTCGGTACCTTA  342

seq1  ATGTTAATAAGGAGCTCCAGCAGGTTTTTGGGCGGCATAACGATGGAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATAAGGAGCTCCAGCAGGTTTTTGGGCGGCATAACGATGGAAGT  392

seq1  GTTCAGAGGAATCACGTAGCACTTGTCCAGGTTAAGGTCCAAATAAGCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGGAATCACGTAGCACTTGTCCAGGTTAAGGTCCAAATAAGCAG  442

seq1  TGAGTTTCTGGAAAGAAGGACATGTCTCGGACGGGTCAGCAGGCCTGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCTGGAAAGAAGGACATGTCTCGGACGGGTCAGCAGGCCTGAGA  492

seq1  TGCACAGACTGAGCTTCTGAGAATCGTACCCACAAGATGGGCTAGCTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGACTGAGCTTCTGAGAATCGTACCCACAAGATGGGCTAGCTTTA  542

seq1  GAACTTATAAATCACTTGAATTTCAACAAATCAAGAACTCGGTGGGATCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTATAAATCACTTGAATTTCAACAAATCAAGAACTCGGTGGGATCA  592

seq1  GCAGACGAGGCCCAGGCAGCGAGGCCTGAGAAGGCTGAGCCTCGGGGATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACGAGGCCCAGGCAGCGAGGCCTGAGAAGGCTGAGCCTCGGGGATA  642

seq1  GGGACCTAAGTCTACTTTTGTTAATCTCATTTGAGACAGTACTTCACTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTAAGTCTACTTTTGTTAATCTCATTTGAGACAGTACTTCACTAC  692

seq1  GTAGACCAGGCTGGCCTCAAACTTGTGCATCCTATAGTCTTGGCCTCCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTCAAACTTGTGCATCCTATAGTCTTGGCCTCCCC  742

seq1  AGTGCTGGAAGGAGACGCACGCTTGCAGTTTCCAACTCTTCCCTCCCCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGAAGGAGACGCACGCTTGCAGTTTCCAACTCTTCCCTCCCCTC  792

seq1  TCTCTCAAGTGCAAACTAAACCCTAAACTGAAGAATTTAGCAACTACTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAAGTGCAAACTAAACCCTAAACTGAAGAATTTAGCAACTACTAA  842

seq1  AATTAAAACTGTAAAACTCCTACTAGAGACCCTGAGCTCTTTTCCCAATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAACTGTAAAACTCCTACTAGAGACCCTGAGCTCTTTTCCCAATC  892

seq1  CTGGAACTGGCTCACCTTGTTGAAGTCGTGCACAATGTTGGCAGGATCGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTGGCTCACCTTGTTGAAGTCGTGCACAATGTTGGCAGGATCGC  942

seq1  TGTCCGCAAACTCTGGTACAGGCACACTGATGAATTC  986
      |||||||||||||||||||||||||||||||||||||
seq2  TGTCCGCAAACTCTGGTACAGGCACACTGATGAATTC  979

seq1: chr14_73634681_73635884
seq2: B6Ng01-063H13.g_66_1236

seq1  GAATTCAAGGAATCTGAAGCAAATAAAAAGCAGGAAGGGAACTTTGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAATCTGAAGCAAATAAAAAGCAGGAAGGGAACTTTGTAGA  50

seq1  GCCTAATTCCTTTCTTTTACAGCCAAGAAGCCAGAGTCCCCACAGGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATTCCTTTCTTTTACAGCCAAGAAGCCAGAGTCCCCACAGGAGCA  100

seq1  AAGGAAAAGGACTGAAAAGGACAAGCAGAGTTCTCTGCTGGGAGCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGGACTGAAAAGGACAAGCAGAGTTCTCTGCTGGGAGCTCTTT  150

seq1  GCACTGCATTTTCCTACTCCCCGACCCCCTTAGAAAAAGATGTATAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCATTTTCCTACTCCCCGACCCCCTTAGAAAAAGATGTATAGTCT  200

seq1  CTTTTTATTGCCTACAGCACATGCTTTATTCATGCATAAAGAATCTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATTGCCTACAGCACATGCTTTATTCATGCATAAAGAATCTACAC  250

seq1  TAGTAAAAGACAGTCTAGATTCCTTCTAGATTTTTCTATAGAGAAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAGACAGTCTAGATTCCTTCTAGATTTTTCTATAGAGAAAACCC  300

seq1  TTCAAGTGTTTCAGGGATTTGTTTTGGAGAATAGCAGATAGTTTTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGTTTCAGGGATTTGTTTTGGAGAATAGCAGATAGTTTTGGAGA  350

seq1  ATAGCTAGCAAGGCTTGAAATCCTCCTTCAAATCTGCTTCTTGTGTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAGCAAGGCTTGAAATCCTCCTTCAAATCTGCTTCTTGTGTGCTC  400

seq1  TGAGTCATGGTGTCTCAGAGTTCCAGAAAGGTAGGATAAAACCAGGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATGGTGTCTCAGAGTTCCAGAAAGGTAGGATAAAACCAGGGCCC  450

seq1  AAGGAAGGAGATTTCAAGGGCCCTGGAGTCAGATCCTGTGCACTAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAGATTTCAAGGGCCCTGGAGTCAGATCCTGTGCACTAAAATG  500

seq1  GTAAACTTTACTCTGCACTGAACCATATATAGTTAATCTACCAACTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTTTACTCTGCACTGAACCATATATAGTTAATCTACCAACTGATA  550

seq1  ATATGCTTAGCTAGAATTGTAGTTTGACATTTGATGCTTTTCCTAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTAGCTAGAATTGTAGTTTGACATTTGATGCTTTTCCTAAAACA  600

seq1  AAGCTAATAACAAATGTCCTTTCGCAACTAAGTATTTTTGTCAACAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATAACAAATGTCCTTTCGCAACTAAGTATTTTTGTCAACAGGAA  650

seq1  AGCACACACATGGATACACATGTGAAGATCCATAGTGCATTTCAGAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACACATGGATACACATGTGAAGATCCATAGTGCATTTCAGAGCTG  700

seq1  AAAGGAGACTTTCCCGGATACTCTTATTACATAAAGGCAACACATACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGACTTTCCCGGATACTCTTATTACATAAAGGCAACACATACACA  750

seq1  GTTCTAAAATAAAATGTATCAGATTCCTGCCATCATAAACCTTCCTTTGT  800
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCT-AAATAAAATGTATCAGATTCCTGCCATCATAAACCTTCCTTTGT  799

seq1  GTCTCAGACTACCATATCGTTTTTATTTTACCACTGTGTAAATAAATTAT  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCTCAGACTACCATATCG-TTTTATTTTACCACTGTGTAAATAAATTAT  848

seq1  TATTTAAGATTTTATTTTAGTTAACACTTATTACATTTAAACTGAATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGATTTTATTTTAGTTAACACTTATTACATTTAAACTGAATAAT  898

seq1  GTTTAGAATGGATTTGTTTAGAATGGTGTTAGAGTTTCACTTAATCACTT  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTTAGAATGGATTTGTTTAG-ATGGTGTTAGAGTTTCACTTAATCACTT  947

seq1  GCTGGGATGCTGGAGTCTGAGCACAGGGCCTCCTACATGGAGCTCCAACA  1000
      |||||||||||||||||||||||||||    ||||||||||||| |||||
seq2  GCTGGGATGCTGGAGTCTGAGCACAGG---CCCTACATGGAGCT-CAACA  993

seq1  CTGTTCCAACCTGCAAATCTTAAAGTAAAAACCTTTTGTAAGTTTTTTTC  1050
      ||||||    |||| ||||||||||| |||||||||||||||||||||  
seq2  CTGTTC---ACTGC-AATCTTAAAGT-AAAACCTTTTGTAAGTTTTTT--  1036

seq1  CCCCCTGTGTATGAGTGTTTTGCCTTCTTGTATGTCTGTGCACTGAGTGC  1100
      ||||||||||||| |||||||||  |||||| ||||   ||||||| |||
seq2  CCCCCTGTGTATG-GTGTTTTGC--TCTTGT-TGTC--GGCACTGAATGC  1080

seq1  ACG-CAGTGCCTGCAGAGTCAGACGTGGGTACTGGATATCCTGGGACTGG  1149
      ||| ||||| ||||||  |||||||| |||||| ||||||   |||||| 
seq2  ACGCCAGTG-CTGCAG-TTCAGACGT-GGTACT-GATATCTCTGGACTGA  1126

seq1  AGTTACAGACAGGACTGAGCTGCCATTGGGTGCTGACAATCAAACCTGGG  1199
      |  |||| || ||||||| ||  |||  ||| |  ||||| |||||||||
seq2  A--TACA-ACGGGACTGA-CT--CAT--GGT-CGTACAAT-AAACCTGGG  1166

seq1  CCCTT  1204
      |||||
seq2  CCCTT  1171