BAC Information

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BAC

Clone NameB6Ng01-063L04
Chromosome14 (Build37)
Map Location 78,995,682 - 79,092,353
singlet/doubletdoublet
Overlap geneDgkh
Upstream geneD230005D02Rik, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
Downstream geneLOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063L04.bB6Ng01-063L04.g
ACCDH883711DH883712
length9781,101
definitionDH883711|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L04, 5' end.DH883712|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,091,372 - 79,092,353)(78,995,682 - 78,996,782)
sequence
gaattcaaaaaaggatgtttattttaatgatgacattcagtaaatatgct
gccagttgtcagcacttaggaacggttgagcaaaatagaaaacaaaaata
aacaagcaaatatcaaaatgaaagaaacaaaacaaactactaaggagaga
atgagatcttgcctgaaggaacttgcaaattaaatccagagttgatctgc
ccagagtgatctgccctgttgtgacagaaggaaggtggtgacaccaggaa
gtggcaataagatgggagaggacagggccacacctttcctttagtgccct
gcaggcgggccacccttcctttctgttttattcgtctgtgatactcagat
ggagaaaccacactgggttgtgcagtaatgcaggggtccagattcacaga
gccacttcacagggccgtgggggagccagggaaccagggagggaggcagg
atgaactgcttgctgggtgcttgctggggatgggagttaacctagcctgg
catcaccaggagggcacctagccctttctgtgctctgacctggggttctg
catatcttccagcacctaccagccggctgcccctgcaaccccagcttgtc
ccactgcccacaccctcttatttgctgctctcctttccttgatttttctt
cttgaacaccttcttcaaagagcctggattgctagaacagtctccaaagg
cttaagagaaataccgacacaaaacaagttccatccctcttaaaagagag
aaaaataccctatagccagctatttttcctcctttagaccctttcaagac
aaataaaagtggatctgatactacgtcccctaagcccccatgaaggggct
gcaaagatgtctcagtggttaagagtacttaatgttcttgcagaggaccc
aagttcagtctcagcattcctggggcagtgcaaacagtgcagtaactcag
ttcagggcaccaatgctctcctctgtga
gaattcagtgcattgctataaatattgttcacactcattttccttttatt
ttccactatcactttatggagtggatgggttctgcacagatgccatgtgt
gccaggcatatgtatgaacatcagaagataatctgcaagagtcaattctc
tccttataccagaggtaaaggtgtgtgccaccaaacttgatgaccagagt
tcaattcccaggacacatggttgacagaaagaactgactcctgtaagtca
acctctgaccataccagacatacaagtcatggtatgtacatgcgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgcaaattttaaaatgaaaacaat
agtaaatatatctcaagcttccaaaagtgttttggggagtctaaaaaaga
gatgcagtcaatgtgggttagaagctagaaataaggaaactgtgtaatgg
ggtgaggaaagatggcagggttagcagactgaagagagaaaggctgggga
tggcatgaatacaagtacaaaccagcactaaggtcacccctcagggcgag
gcacagatctctgcaccagggagtggctgctgagcaggtgagaaagggac
ccatctcagggacagaccatgatccatttctgagcatccacaccacccct
ttttttgcagatagactcatacactttgggacacatgcaaagttttagga
tttgaacaaaacagaaacacaaaccaacaaacaaaaacagaagtcaaata
gctacaaaagtgttccttacagtgagtctagatctgggtcaataaacggt
gttgccccgaaaggatcgatgttcgccagcaacatttttgttgatgatag
aactcccagcaatggaggcagcaagtcctgctctcaaacctgccagaaaa
catagcatcacatgttagaggaagcagactcaggcctggtcactcaactt
gcccttctcaaacagcttgctccagcgctggttttcgtgacacttcagta
gccaagcttcagaagatgatgcttggaaacgtgagtgtttttaatatttc
caaatgtctgcatggtttataagagaataacatgaaaggatttcggaata
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79091372_79092353
seq2: B6Ng01-063L04.b_48_1025 (reverse)

seq1  TCACAGAGGAGAGCATTGGGTGCCCTGGAACTGAGTTACCTGCACTGTTT  50
      ||||||||||||||||| |||||||| ||||||||||| |||||||||||
seq2  TCACAGAGGAGAGCATT-GGTGCCCT-GAACTGAGTTA-CTGCACTGTTT  47

seq1  GCACTGCCCCAGGAATGCTGAGAACTGAACTTGGGTCCTCTGCAAGAACA  100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCACTGCCCCAGGAATGCTGAG-ACTGAACTTGGGTCCTCTGCAAGAACA  96

seq1  TTAAGTACTCTTAACCACTGAGACATCTTTGCAGCCCCTTCATGGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTACTCTTAACCACTGAGACATCTTTGCAGCCCCTTCATGGGGGCT  146

seq1  TAGGGGACGTAGTATCAGATCCACTTTTATTTGTCTTGAAAGGGTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACGTAGTATCAGATCCACTTTTATTTGTCTTGAAAGGGTCTAAA  196

seq1  GGAGGAAAAATAGCTGGCTATAGGGTATTTTTCTCTCTTTTAAGAGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAAATAGCTGGCTATAGGGTATTTTTCTCTCTTTTAAGAGGGAT  246

seq1  GGAACTTGTTTTGTGTCGGTATTTCTCTTAAGCCTTTGGAGACTGTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTGTTTTGTGTCGGTATTTCTCTTAAGCCTTTGGAGACTGTTCTA  296

seq1  GCAATCCAGGCTCTTTGAAGAAGGTGTTCAAGAAGAAAAATCAAGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCAGGCTCTTTGAAGAAGGTGTTCAAGAAGAAAAATCAAGGAAAG  346

seq1  GAGAGCAGCAAATAAGAGGGTGTGGGCAGTGGGACAAGCTGGGGTTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGCAAATAAGAGGGTGTGGGCAGTGGGACAAGCTGGGGTTGCAG  396

seq1  GGGCAGCCGGCTGGTAGGTGCTGGAAGATATGCAGAACCCCAGGTCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCGGCTGGTAGGTGCTGGAAGATATGCAGAACCCCAGGTCAGAG  446

seq1  CACAGAAAGGGCTAGGTGCCCTCCTGGTGATGCCAGGCTAGGTTAACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGGGCTAGGTGCCCTCCTGGTGATGCCAGGCTAGGTTAACTCC  496

seq1  CATCCCCAGCAAGCACCCAGCAAGCAGTTCATCCTGCCTCCCTCCCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAGCAAGCACCCAGCAAGCAGTTCATCCTGCCTCCCTCCCTGGT  546

seq1  TCCCTGGCTCCCCCACGGCCCTGTGAAGTGGCTCTGTGAATCTGGACCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTCCCCCACGGCCCTGTGAAGTGGCTCTGTGAATCTGGACCCC  596

seq1  TGCATTACTGCACAACCCAGTGTGGTTTCTCCATCTGAGTATCACAGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTACTGCACAACCCAGTGTGGTTTCTCCATCTGAGTATCACAGACG  646

seq1  AATAAAACAGAAAGGAAGGGTGGCCCGCCTGCAGGGCACTAAAGGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAGAAAGGAAGGGTGGCCCGCCTGCAGGGCACTAAAGGAAAGG  696

seq1  TGTGGCCCTGTCCTCTCCCATCTTATTGCCACTTCCTGGTGTCACCACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCTGTCCTCTCCCATCTTATTGCCACTTCCTGGTGTCACCACCT  746

seq1  TCCTTCTGTCACAACAGGGCAGATCACTCTGGGCAGATCAACTCTGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGTCACAACAGGGCAGATCACTCTGGGCAGATCAACTCTGGATT  796

seq1  TAATTTGCAAGTTCCTTCAGGCAAGATCTCATTCTCTCCTTAGTAGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGCAAGTTCCTTCAGGCAAGATCTCATTCTCTCCTTAGTAGTTTG  846

seq1  TTTTGTTTCTTTCATTTTGATATTTGCTTGTTTATTTTTGTTTTCTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCTTTCATTTTGATATTTGCTTGTTTATTTTTGTTTTCTATTT  896

seq1  TGCTCAACCGTTCCTAAGTGCTGACAACTGGCAGCATATTTACTGAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACCGTTCCTAAGTGCTGACAACTGGCAGCATATTTACTGAATGT  946

seq1  CATCATTAAAATAAACATCCTTTTTTGAATTC  982
      ||||||||||||||||||||||||||||||||
seq2  CATCATTAAAATAAACATCCTTTTTTGAATTC  978

seq1: chr14_78995682_78996782
seq2: B6Ng01-063L04.g_67_1167

seq1  GAATTCAGTGCATTGCTATAAATATTGTTCACACTCATTTTCCTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCATTGCTATAAATATTGTTCACACTCATTTTCCTTTTATT  50

seq1  TTCCACTATCACTTTATGGAGTGGATGGGTTCTGCACAGATGCCATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTATCACTTTATGGAGTGGATGGGTTCTGCACAGATGCCATGTGT  100

seq1  GCCAGGCATATGTATGAACATCAGAAGATAATCTGCAAGAGTCAATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCATATGTATGAACATCAGAAGATAATCTGCAAGAGTCAATTCTC  150

seq1  TCCTTATACCAGAGGTAAAGGTGTGTGCCACCAAACTTGATGACCAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATACCAGAGGTAAAGGTGTGTGCCACCAAACTTGATGACCAGAGT  200

seq1  TCAATTCCCAGGACACATGGTTGACAGAAAGAACTGACTCCTGTAAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCCAGGACACATGGTTGACAGAAAGAACTGACTCCTGTAAGTCA  250

seq1  ACCTCTGACCATACCAGACATACAAGTCATGGTATGTACATGCGTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGACCATACCAGACATACAAGTCATGGTATGTACATGCGTGTGTG  300

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAATTTTAAAATGAAAACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAATTTTAAAATGAAAACAAT  350

seq1  AGTAAATATATCTCAAGCTTCCAAAAGTGTTTTGGGGAGTCTAAAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATATATCTCAAGCTTCCAAAAGTGTTTTGGGGAGTCTAAAAAAGA  400

seq1  GATGCAGTCAATGTGGGTTAGAAGCTAGAAATAAGGAAACTGTGTAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTCAATGTGGGTTAGAAGCTAGAAATAAGGAAACTGTGTAATGG  450

seq1  GGTGAGGAAAGATGGCAGGGTTAGCAGACTGAAGAGAGAAAGGCTGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGAAAGATGGCAGGGTTAGCAGACTGAAGAGAGAAAGGCTGGGGA  500

seq1  TGGCATGAATACAAGTACAAACCAGCACTAAGGTCACCCCTCAGGGCGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGAATACAAGTACAAACCAGCACTAAGGTCACCCCTCAGGGCGAG  550

seq1  GCACAGATCTCTGCACCAGGGAGTGGCTGCTGAGCAGGTGAGAAAGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGATCTCTGCACCAGGGAGTGGCTGCTGAGCAGGTGAGAAAGGGAC  600

seq1  CCATCTCAGGGACAGACCATGATCCATTTCTGAGCATCCACACCACCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCAGGGACAGACCATGATCCATTTCTGAGCATCCACACCACCCCT  650

seq1  TTTTTTGCAGATAGACTCATACACTTTGGGACACATGCAAAGTTTTAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCAGATAGACTCATACACTTTGGGACACATGCAAAGTTTTAGGA  700

seq1  TTTGAACAAAACAGAAACACAAACCAACAAACAAAAACAGAAGTCAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACAAAACAGAAACACAAACCAACAAACAAAAACAGAAGTCAAATA  750

seq1  GCTACAAAAGTGTTCCTTACAGTGAGTCTAGATCTGGGTCAATAAACGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAAGTGTTCCTTACAGTGAGTCTAGATCTGGGTCAATAAACGGT  800

seq1  GTTGCCCCGAAAGGATCGATGTTCGCCAGCAACA-TTTTGTTGATGATAG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTGCCCCGAAAGGATCGATGTTCGCCAGCAACATTTTTGTTGATGATAG  850

seq1  AACTCCCAGCAATGGAGGCAGCAAGTCCTGCTCTCAAACCTGCCAGAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACTCCCAGCAATGGAGGCAGCAAGTCCTGCTCTCAAACCTGCCAGAAAA  900

seq1  ATTAGCATCACATGTTAAGAGGAAGCAGACTCAGGCCTGGTCCACTCAAC  949
        |||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CATAGCATCACATGTT-AGAGGAAGCAGACTCAGGCCTGGT-CACTCAAC  948

seq1  CTGCCCTTCTCAAACAGCTTGCTCCCAGCGCCTGGTTTTCAGTGACCACT  999
       |||||||||||||||||||||| |||||| ||||||||| |||||   |
seq2  TTGCCCTTCTCAAACAGCTTGCT-CCAGCG-CTGGTTTTC-GTGACACTT  995

seq1  CAGTAGCCAAAGCTCAGAGGATGATGCTTGGAAACGTGAAGTG-TTTTAA  1048
      ||||||||||   ||||| ||||||||||||||||||| |||| ||||||
seq2  CAGTAGCCAAGCTTCAGAAGATGATGCTTGGAAACGTG-AGTGTTTTTAA  1044

seq1  TATTTCCAAATGTCTGCATGTTGTAATAAAGAGAAAAACATGAAA-----  1093
      |||||||||||||||||||| | ||   ||||||| |||||||||     
seq2  TATTTCCAAATGTCTGCATGGTTTA--TAAGAGAATAACATGAAAGGATT  1092

seq1  -AGGAATAT  1101
        |||||||
seq2  TCGGAATAT  1101