BAC Information

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BAC

Clone NameB6Ng01-064K22
Chromosome14 (Build37)
Map Location 65,319,299 - 65,464,563
singlet/doubletdoublet
Overlap geneKif13b, Hmbox1
Upstream geneXkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
Downstream geneLOC100043657, D14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064K22.bB6Ng01-064K22.g
ACCDH884393DH884394
length7371,161
definitionDH884393|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K22, 5' end.DH884394|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,319,299 - 65,320,034)(65,463,374 - 65,464,563)
sequence
gaattcctgtctttatggttgagcagtaagtgctcttgagtcggatcgat
cgtttacttgcttgttgtaggattcttctcctttgtttcctgggataccc
agtacactcaccccgacccttttaactcttattttaaaagtctatggata
tattttttttttcctgtcttcatattgtgtccttctgtttaaaagctttc
ctagttgttttttttttttttctttttttgaagatttatttattatatgt
aagtacactgtagctgtcttcagacacaccagaagagggcatcttatccc
attatagatggttgtgagccaccatgtggttgctggtatctaaactgggg
acctccagaagagcagtcagtgctcttaactgctgagccatctctccagc
ccggtttcctagtttttggctatggaatttgcatttttatttctcacttg
ccttactgtttctggatgacttggggaaggaaggatggtaataaaagttc
ttttctgcagagactctgtcatatgtaagagagtggtatcaggaatgttt
aaggaaatcattactactagagaaaatttaatcaagctgagaagtaacaa
atgcataagagcctctcaagtcaaggctgacaaagtcgtgccgacttccc
cagagcaagcagtgggtgctctgtgttggggaaggaaagctgggggaacg
gtgtagtttggggtgttgggcaagggtgggggaactg
gaattcttcaccaggcgggttctggagagtagcgtgtgcagagactagtg
tggcaggctagcatgtctgggtgccatgagcagactaaccctggggagcc
gtcacccctgagaatgagctcagtcagagctctgttttcctgcctgtcct
catagtcagcttgtgagcggtcctctcaaagtcagtgtttacagatgcat
ggtaatgaactatcaagagtgttaaggtctgaagtgacaaagacttcatc
gttcaccttgcacttcatgtagattcttagaattactaatttttttatta
aatgagaaaactacaaactcgtgacttactacttagaaaaaattgacttc
tcttatttttggttttgttcctaaaactttattataatcacaaagaatat
ttcatcttcttcattattgttttgttgctgaattgagttagcctgctgaa
gggagtatctcttaagctcccagatctcagaggcaagttagtaacaccaa
gaaaaaaatgagtgtgttttttagatttttacatttaagtgtgattgctt
tttagcaagtggccccatcaataacggtgaatttattaagtggcatgctg
cagcgaaggatgatcctggcttagtaaacttgagggaatgtaaatgagat
gatggggagcagacggagcagttgtgttatcatgacaaagtgtaaggcag
gctgagtcatggcagctccaacctgtcatcccagcacgcaggaggctgaa
gcagaggaacacttaaaaagagtgtgcaggagccctgaaagcttaccaag
ttcagctagcctaggcggctgagggagactatctcaaaaccagtagtgac
agtacgggtaataaagcaaaagatgtgcgtgcagaagatgaagtagaggg
catgataaaattaaatatttgcttaaatgtgagtttatatttttgtatct
ttcttttctttggtatctgatgatctagcattaggaacacatactaaata
tgttctaggtatcataggcaggtacttgctaaaatgactattgtaagaac
attggggctggaaatggctcgcagttagaacctcgtttcaaagaactgaa
gttcattctacttccagatggggctcacctgtcattaatcacatgccagg
ggagccaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_65319299_65320034
seq2: B6Ng01-064K22.b_45_781

seq1  GAATTCCTGTCTTTATGGTTGAGCAGTAAGTGCTCTTGAGTCGGATCGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTTTATGGTTGAGCAGTAAGTGCTCTTGAGTCGGATCGAT  50

seq1  CGTTTACTTGCTTGTTGTAGGATTCTTCTCCTTTGTTTCCTGGGATACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTACTTGCTTGTTGTAGGATTCTTCTCCTTTGTTTCCTGGGATACCC  100

seq1  AGTACACTCACCCCGACCCTTTTAACTCTTATTTTAAAAGTCTATGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTCACCCCGACCCTTTTAACTCTTATTTTAAAAGTCTATGGATA  150

seq1  TATTTTTTTTTTCCTGTCTTCATATTGTGTCCTTCTGTTTAAAAGCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTTTCCTGTCTTCATATTGTGTCCTTCTGTTTAAAAGCTTTC  200

seq1  CTAGTTGTTTTTTTTTTTTTTCTTTTTTTGAAGATTTATTTATTATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGTTTTTTTTTTTTTTCTTTTTTTGAAGATTTATTTATTATATGT  250

seq1  AAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTTATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTTATCCC  300

seq1  ATTATAGATGGTTGTGAGCCACCATGTGGTTGCTGGTATCTAAACTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGATGGTTGTGAGCCACCATGTGGTTGCTGGTATCTAAACTGGGG  350

seq1  ACCTCCAGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCAGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGC  400

seq1  CCGGTTTCCTAGTTTTTGGCTATGGAATTTGCATTTTTATTTCTCACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTTTCCTAGTTTTTGGCTATGGAATTTGCATTTTTATTTCTCACTTG  450

seq1  CCTTACTGTTTCTGGATGACTTGGGGAAGGAAGGATGGTAATAAAAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTGTTTCTGGATGACTTGGGGAAGGAAGGATGGTAATAAAAGTTC  500

seq1  TTTTCTGCAGAGACTCTGTCATATGTAAGAGAGTGGTATCAGGAATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCAGAGACTCTGTCATATGTAAGAGAGTGGTATCAGGAATGTTT  550

seq1  AAGGAAATCATTACTACTAGAGAAAATTTAATCAAGCTGAGAAGTAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATCATTACTACTAGAGAAAATTTAATCAAGCTGAGAAGTAACAA  600

seq1  ATGCATAAGAGCCTCTCAAGTCAAGGCTGACAAAGTCGTGCCGACTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAGAGCCTCTCAAGTCAAGGCTGACAAAGTCGTGCCGACTTCCC  650

seq1  CAGAGCAAGCAGTGGGTGCTCTGTGTTGGGGAAGGAAAGCTGGGGGAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAAGCAGTGGGTGCTCTGTGTTGGGGAAGGAAAGCTGGGGGAACG  700

seq1  GTGTAGTTT-GGGTGTTGGGCAAGGGTGGGGGAACTG  736
      ||||||||| |||||||||||||||||||||||||||
seq2  GTGTAGTTTGGGGTGTTGGGCAAGGGTGGGGGAACTG  737

seq1: chr14_65463374_65464563
seq2: B6Ng01-064K22.g_68_1228 (reverse)

seq1  AGGGTGGCTCCCCCTGGCATGGAGTTATAGACAGGTGTGAGCCACCATTT  50
      ||||||||| |||||||||||   |||  |||||  ||||||| |||| |
seq2  AGGGTGGCT-CCCCTGGCATGTGATTAATGACAG--GTGAGCC-CCATCT  46

seq1  GGGAGATGAGAATAGAACCTCAGTCCTCTGAAACAGAAGCTCTCAACTGC  100
      || ||   ||||| |||| ||||| || |||||| || | ||| ||||||
seq2  GGAAG--TAGAAT-GAACTTCAGTTCTTTGAAAC-GAGGTTCT-AACTGC  91

seq1  TGAGCCATCTCTCCAGCCCC-ATGGTCTTACAATAGTCATTTTGTAGCAA  149
       ||||||  | ||||||||| ||| |||||||||||||||||  ||||||
seq2  -GAGCCA--TTTCCAGCCCCAATGTTCTTACAATAGTCATTT--TAGCAA  136

seq1  GTGACCTGCCTATGGATACCTAGAACATATTTAGTATGTGTTCCTAATTG  199
      || |||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  GT-ACCTGCCTAT-GATACCTAGAACATATTTAGTATGTGTTCCTAA-TG  183

seq1  CTAGATCATCAGATACCAAAGAAAAAGAAAAGAATACAAAAATATAAACT  249
      ||||||||||||||||||||| ||||||||   |||||||||||||||||
seq2  CTAGATCATCAGATACCAAAG-AAAAGAAA--GATACAAAAATATAAACT  230

seq1  CAACATTTAAAGCAAATAATTTAAATTTTATCATGCCCCTCTACCTTCAT  299
      | |||||| |||||||||  || |||||||||||| ||||||| ||||||
seq2  C-ACATTT-AAGCAAATA--TTTAATTTTATCATG-CCCTCTA-CTTCAT  274

seq1  CTTTCTGCACGCACATCTTTTGCTTTATTACCCGTACTGTCACTACTGGT  349
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  C-TTCTGCACGCACATCTTTTGCTTTATTACCCGTACTGTCACTACTGG-  322

seq1  TTTTGAGATAGTCTCCCTCAGCCGCCTAGGCTAGCCTGAACTTGGTAAGC  399
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTGAGATAGTCTCCCTCAGCCGCCTAGGCTAG-CTGAACTTGGTAAGC  371

seq1  TTTCAGGGCTCCTGCACACTCTTTTTAAGTGTTCCTCCTGCTTCAGCCTC  449
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCAGGGCTCCTGCACACTCTTTTTAAGTGTTCCT-CTGCTTCAGCCTC  420

seq1  CTGCGTGCTGGGATGACAGGTTGGAGCTGCCATGACTCAGCCTGCCTTAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGCTGGGATGACAGGTTGGAGCTGCCATGACTCAGCCTGCCTTAC  470

seq1  ACTTTGTCATGATAACACAACTGCTCCGTCTGCTCCCCATCATCTCATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCATGATAACACAACTGCTCCGTCTGCTCCCCATCATCTCATTT  520

seq1  ACATTCCCTCAAGTTTACTAAGCCAGGATCATCCTTCGCTGCAGCATGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCCTCAAGTTTACTAAGCCAGGATCATCCTTCGCTGCAGCATGCC  570

seq1  ACTTAATAAATTCACCGTTATTGATGGGGCCACTTGCTAAAAAGCAATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAATTCACCGTTATTGATGGGGCCACTTGCTAAAAAGCAATCA  620

seq1  CACTTAAATGTAAAAATCTAAAAAACACACTCATTTTTTTCTTGGTGTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAATGTAAAAATCTAAAAAACACACTCATTTTTTTCTTGGTGTTA  670

seq1  CTAACTTGCCTCTGAGATCTGGGAGCTTAAGAGATACTCCCTTCAGCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGCCTCTGAGATCTGGGAGCTTAAGAGATACTCCCTTCAGCAGG  720

seq1  CTAACTCAATTCAGCAACAAAACAATAATGAAGAAGATGAAATATTCTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAATTCAGCAACAAAACAATAATGAAGAAGATGAAATATTCTTT  770

seq1  GTGATTATAATAAAGTTTTAGGAACAAAACCAAAAATAAGAGAAGTCAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATAATAAAGTTTTAGGAACAAAACCAAAAATAAGAGAAGTCAAT  820

seq1  TTTTTCTAAGTAGTAAGTCACGAGTTTGTAGTTTTCTCATTTAATAAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAGTAGTAAGTCACGAGTTTGTAGTTTTCTCATTTAATAAAAA  870

seq1  AATTAGTAATTCTAAGAATCTACATGAAGTGCAAGGTGAACGATGAAGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTAATTCTAAGAATCTACATGAAGTGCAAGGTGAACGATGAAGTC  920

seq1  TTTGTCACTTCAGACCTTAACACTCTTGATAGTTCATTACCATGCATCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTTCAGACCTTAACACTCTTGATAGTTCATTACCATGCATCTG  970

seq1  TAAACACTGACTTTGAGAGGACCGCTCACAAGCTGACTATGAGGACAGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACTGACTTTGAGAGGACCGCTCACAAGCTGACTATGAGGACAGGC  1020

seq1  AGGAAAACAGAGCTCTGACTGAGCTCATTCTCAGGGGTGACGGCTCCCCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACAGAGCTCTGACTGAGCTCATTCTCAGGGGTGACGGCTCCCCA  1070

seq1  GGGTTAGTCTGCTCATGGCACCCAGACATGCTAGCCTGCCACACTAGTCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGTCTGCTCATGGCACCCAGACATGCTAGCCTGCCACACTAGTCT  1120

seq1  CTGCACACGCTACTCTCCAGAACCCGCCTGGTGAAGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACACGCTACTCTCCAGAACCCGCCTGGTGAAGAATTC  1161