BAC Information

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BAC

Clone NameB6Ng01-065O06
Chromosome14 (Build37)
Map Location 23,442,216 - 23,585,153
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075, EG435392
Downstream geneLOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065O06.bB6Ng01-065O06.g
ACCDH885234DH885235
length9691,007
definitionDH885234|Mus musculus domesticus DNA, BAC clone: B6Ng01-065O06, 5' end.DH885235|Mus musculus domesticus DNA, BAC clone: B6Ng01-065O06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,584,170 - 23,585,153)(23,442,216 - 23,443,242)
sequence
gaattccaagagacagtttataaagaactatgaagaagagttcccctaaa
gaaaacaaacaaataaaacaaaaacaaaaatagatattgctatctttcac
aaaatttcatgaaaattgtgttattttttgctatgacggaaacttcatta
agtgacatttatatagcccctctttcatatccatggtttctatgttctct
gtgcgaaccaagtacagatcaaaagtatttggaggaaaaaaaaaaacctg
catctatactataactatccagacttcttttataatgactgttgtaacaa
tcatcactatttgcacagcattgacattgaagtggggctcatgagtgagt
aatttaaaagccatcttaagtacagggaatgagttacgtgggccatatgc
aaacactgccatctgatatatagaatatgagcatctaagtatttggtcca
tgtgaggggagcaggaaatgctcccaataatcaccaaagaacaagtgtgc
atttgctagataaagctgatataaagggtttaaagaaaagggaaagatgg
ccagccaaagtgctccagtacaaaaaggcacaggacaaggtcagttgtgc
caagagagggcctaaaggcatgttgactaatgttacttcaagtgaacttg
ctggaatgaatgcacaggtgcatcagaggacactcctggagctcaggaga
agcaaagaacaatcttattcctaggatagaaatgaagccaccctataagt
tcatctggggaaaacaggacagagtcagtgggcctactcacatcttactg
gaaaaactaggctctcctctttagatttagttatatctccctgttgccta
ttcaaatgcacagtatatacaaacaatgtgcataacttggctaggattca
cttgggggtgctgtgaaaaaatatgcactcagtaacatgactcgtgactc
tggtttattcatgattatt
gaattcacatcatcggattggattcacatcactttaccatcagagtaggt
ctatatgttgggaagtgggacatagaggagaaagggaattggtaaataaa
agagaagcctggtggttagggaagatgaataaatgtcttctctcgattcc
tcggacttgtgatttcaaggccatgaacatggagaactgcttaaaaagct
gagtcaactgtctttgacccagagctccctctggatggcctgtgtcttgg
taaccctgtagttggcaagagttctcagggagcctgcttcttactaaatc
catttcttcagcatcttcccaagtcaagtcaactgaagagtagctctgtt
tatatttattttgctatttgctcttgtgtctgtgcaggtacacatgcata
tgcaagccacagggtgacatttgctctcttccttagtcacttcctacctt
aaatgttgaggtagcttctttcactgagtctgaaactcatcagtttagct
aggttatctgagcagcaagcttcagggtcctcctgtctcttcttccataa
caatcaagtcgcagttgtgtgctgccatgcctggctttgggtgctgccat
gcctggcttgggtgctgccatgcctggcttgggtgctgccatgcctggct
tggggtgctgccatgcctggcttgggtgctgccttgcctggctttgggtg
ctgccatgcctggcttgggtgctgccatgcctggcttgggtgctgccatg
cctggcttgggtgctgccatgcctggcttgggtgctgccatgcctgcttg
ggtgctgccatgcttgggtttttgcatggtgctgtacatcaaatcaggtc
cttggctggataacacacctttcctgatcgtctcccctgagggttcttaa
attaataaggtcagatgcagatgtccacttgcctttgggaggatcagata
cattgaaaattatgaaattaagtttgcaagaaagagctgttaggaccatg
atctacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23584170_23585153
seq2: B6Ng01-065O06.b_41_1009 (reverse)

seq1  AATAATCCACTGAATAAAACCAGAGTTCACGATGTCATGTCTACTGAGTG  50
      |||||||   ||||| ||||||||| |||||| ||||||| |||||||||
seq2  AATAATC--ATGAAT-AAACCAGAG-TCACGA-GTCATGT-TACTGAGTG  44

seq1  CATACTTTTCTCACAGCACCCCCAAGTGAAATCCTAAGCCAAGTTATGCA  100
      |||| |||| |||||||||||||||||| |||||| ||||||||||||||
seq2  CATA-TTTTTTCACAGCACCCCCAAGTG-AATCCT-AGCCAAGTTATGCA  91

seq1  CATTGTTTGTATATACTGGTGCATTTGAATTAGACAAACAGGGAGATATA  150
      ||||||||||||||||| ||||||||||| ||| | ||||||||||||||
seq2  CATTGTTTGTATATACT-GTGCATTTGAA-TAGGC-AACAGGGAGATATA  138

seq1  ACTAAAATCTAAAGAGAAGAGCCTAGTTTTTCCAGTAAGATGTGAGTAGG  200
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACT-AAATCTAAAGAGGAGAGCCTAGTTTTTCCAGTAAGATGTGAGTAGG  187

seq1  CCCACCTGAACTCTGTCCTGTTTTCCCCAGATGAACTTATAGGGTGGCTT  250
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCA-CTG-ACTCTGTCCTGTTTTCCCCAGATGAACTTATAGGGTGGCTT  235

seq1  CATTTCTATCCTAGGAATAAGATTGTTCTTTGCTTCTCCTGAGCTCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTATCCTAGGAATAAGATTGTTCTTTGCTTCTCCTGAGCTCCAGG  285

seq1  AGTGTCCTCTGATGCACCTGTGCATTCATTCCAGCAAGTTCACTTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTCTGATGCACCTGTGCATTCATTCCAGCAAGTTCACTTGAAGT  335

seq1  AACATTAGTCAACATGCCTTTAGGCCCTCTCTTGGCACAACTGACCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGTCAACATGCCTTTAGGCCCTCTCTTGGCACAACTGACCTTGT  385

seq1  CCTGTGCCTTTTTGTACTGGAGCACTTTGGCTGGCCATCTTTCCCTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCTTTTTGTACTGGAGCACTTTGGCTGGCCATCTTTCCCTTTTC  435

seq1  TTTAAACCCTTTATATCAGCTTTATCTAGCAAATGCACACTTGTTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCCTTTATATCAGCTTTATCTAGCAAATGCACACTTGTTCTTTG  485

seq1  GTGATTATTGGGAGCATTTCCTGCTCCCCTCACATGGACCAAATACTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATTGGGAGCATTTCCTGCTCCCCTCACATGGACCAAATACTTAG  535

seq1  ATGCTCATATTCTATATATCAGATGGCAGTGTTTGCATATGGCCCACGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATATTCTATATATCAGATGGCAGTGTTTGCATATGGCCCACGTA  585

seq1  ACTCATTCCCTGTACTTAAGATGGCTTTTAAATTACTCACTCATGAGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCCCTGTACTTAAGATGGCTTTTAAATTACTCACTCATGAGCCC  635

seq1  CACTTCAATGTCAATGCTGTGCAAATAGTGATGATTGTTACAACAGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAATGTCAATGCTGTGCAAATAGTGATGATTGTTACAACAGTCAT  685

seq1  TATAAAAGAAGTCTGGATAGTTATAGTATAGATGCAGGTTTTTTTTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAAGTCTGGATAGTTATAGTATAGATGCAGGTTTTTTTTTTTC  735

seq1  CTCCAAATACTTTTGATCTGTACTTGGTTCGCACAGAGAACATAGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAATACTTTTGATCTGTACTTGGTTCGCACAGAGAACATAGAAACC  785

seq1  ATGGATATGAAAGAGGGGCTATATAAATGTCACTTAATGAAGTTTCCGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATGAAAGAGGGGCTATATAAATGTCACTTAATGAAGTTTCCGTC  835

seq1  ATAGCAAAAAATAACACAATTTTCATGAAATTTTGTGAAAGATAGCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAAAAATAACACAATTTTCATGAAATTTTGTGAAAGATAGCAATA  885

seq1  TCTATTTTTGTTTTTGTTTTATTTGTTTGTTTTCTTTAGGGGAACTCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTGTTTTTGTTTTATTTGTTTGTTTTCTTTAGGGGAACTCTTC  935

seq1  TTCATAGTTCTTTATAAACTGTCTCTTGGAATTC  984
      ||||||||||||||||||||||||||||||||||
seq2  TTCATAGTTCTTTATAAACTGTCTCTTGGAATTC  969

seq1: chr14_23442216_23443242
seq2: B6Ng01-065O06.g_68_1074

seq1  GAATTCACATCATCGGATTGGATTCACATCACTTTACCATCAGAGTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCATCGGATTGGATTCACATCACTTTACCATCAGAGTAGGT  50

seq1  CTATATGTTGGGAAGTGGGACATAGAGGAGAAAGGGAATTGGTAAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGTTGGGAAGTGGGACATAGAGGAGAAAGGGAATTGGTAAATAAA  100

seq1  AGAGAAGCCTGGTGGTTAGGGAAGATGAATAAATGTCTTCTCTCGATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCTGGTGGTTAGGGAAGATGAATAAATGTCTTCTCTCGATTCC  150

seq1  TCGGACTTGTGATTTCAAGGCCATGAACATGGAGAACTGCTTAAAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGACTTGTGATTTCAAGGCCATGAACATGGAGAACTGCTTAAAAAGCT  200

seq1  GAGTCAACTGTCTTTGACCCAGAGCTCCCTCTGGATGGCCTGTGTCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAACTGTCTTTGACCCAGAGCTCCCTCTGGATGGCCTGTGTCTTGG  250

seq1  TAACCCTGTAGTTGGCAAGAGTTCTCAGGGAGCCTGCTTCTTACTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTGTAGTTGGCAAGAGTTCTCAGGGAGCCTGCTTCTTACTAAATC  300

seq1  CATTTCTTCAGCATCTTCCCAAGTCAAGTCAACTGAAGAGTAGCTCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCAGCATCTTCCCAAGTCAAGTCAACTGAAGAGTAGCTCTGTT  350

seq1  TATATTTATTTTGCTATTTGCTCTTGTGTCTGTGCAGGTACACATGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATTTTGCTATTTGCTCTTGTGTCTGTGCAGGTACACATGCATA  400

seq1  TGCAAGCCACAGGGTGACATTTGCTCTCTTCCTTAGTCACTTCCTACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCCACAGGGTGACATTTGCTCTCTTCCTTAGTCACTTCCTACCTT  450

seq1  AAATGTTGAGGTAGCTTCTTTCACTGAGTCTGAAACTCATCAGTTTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGAGGTAGCTTCTTTCACTGAGTCTGAAACTCATCAGTTTAGCT  500

seq1  AGGTTATCTGAGCAGCAAGCTTCAGGGTCCTCCTGTCTCTTCTTCCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATCTGAGCAGCAAGCTTCAGGGTCCTCCTGTCTCTTCTTCCATAA  550

seq1  CAATCAAGTCGCAGTTGTGTGCTGCCATGCCTGGC-TTGGGTGCTGCCAT  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAATCAAGTCGCAGTTGTGTGCTGCCATGCCTGGCTTTGGGTGCTGCCAT  600

seq1  GCCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGCT  650

seq1  T-GGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGC-TTGGGTG  697
      | ||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  TGGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCTTGCCTGGCTTTGGGTG  700

seq1  CTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATG  750

seq1  CCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATGCCTGGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGGCTTGGGTGCTGCCATGCCTGGCTTGGGTGCTGCCATGCCT-GCTT  799

seq1  GGGTGCTGCCATGCTTGGCTTTTTGCATGGGTGCTGTACATCCAAATCCA  847
      |||||||||||||||||| ||||||||| |||||||||||| ||||| ||
seq2  GGGTGCTGCCATGCTTGGGTTTTTGCAT-GGTGCTGTACAT-CAAAT-CA  846

seq1  GGTCCTTTGGCTTGTATAGCACACACTTTCCTGATCCGTCTCCCCTGAGG  897
      ||||| ||||| || ||| ||||| |||||||||| ||||||||||||||
seq2  GGTCC-TTGGC-TGGATAACACAC-CTTTCCTGAT-CGTCTCCCCTGAGG  892

seq1  GTTCCTTAGATTAAATAAGGTCAGATGCAGGATGTTCCACATTGTCTTTG  947
      ||| |||| ||| |||||||||||||||| |||| ||||| ||| |||||
seq2  GTT-CTTAAATT-AATAAGGTCAGATGCA-GATG-TCCAC-TTGCCTTTG  937

seq1  GGAGGTATCTAGTATACATTGGAAAATTAATGAAAATAAGTTTTGCAAGA  997
      ||||| ||| || ||||||| ||||||| |||||| |||| |||||||||
seq2  GGAGG-ATC-AG-ATACATT-GAAAATT-ATGAAATTAAG-TTTGCAAGA  981

seq1  AAAGAAGCTGTCAGGACCATGATTCCTACC  1027
      ||   |||||| |||||||||||  |||||
seq2  AA--GAGCTGTTAGGACCATGAT--CTACC  1007