BAC Information

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BAC

Clone NameB6Ng01-066F17
Chromosome14 (Build37)
Map Location 112,050,646 - 112,051,201
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
Downstream geneSlitrk5, LOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066F17.bB6Ng01-066F17.g
ACCDH885557DH885558
length452971
definitionDH885557|Mus musculus domesticus DNA, BAC clone: B6Ng01-066F17, 5' end.DH885558|Mus musculus domesticus DNA, BAC clone: B6Ng01-066F17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcatagaaagggacctactatgattgtccctgaaagacacaaaaagaagc
tgaaagagtcagatgcagctctttacacctaaccaatagacagaagctgc
caacccttgtcggttgaattaggggaaagttgaaagaagctgaggagggg
ggtgaccctgtgggaggaccagcagcttcaattaacctagacccctgaga
tctctcagacactgaaccaccgatcaggcagcatgcaccagctgatataa
ggcccccaaaacatgtttagctcaggacggctgggcctgggtttagtcag
agaagatgcacctgaccctcaagatactggaaatcccagggaatggagag
gtctggtggggtgggggtggggtggggacatcctcatggagacagggttt
agggttgggggggggggtagtcccccccttcttttatttaaaaaaaaaac
tg
gaattccagggagtagaatcaggtaactatcttgaagttaatcatctttg
gagcacagtctctcaagaaaccagctggccatgttggccagggaaccaag
tgggtaatcttcactctccattccatcctccaagtccacttccagagtct
tcaccccagtagcagactccctgcaggggtctgtctttcctttcttcctc
tattccctagtgacttcagagatcttcatggaaaaccaagcctccctccc
tcctttggttactttcacatacccatcattctagcccatccgaattcctt
catgtcagctcccaatgcctagaaacaagatctgcctgagatcccaattg
ccacagtttcaataacacagaatcactcactgcctggtactgtacaagca
cttcaagttctgaagattcagagaaagcaacaggaaccaagcagtgaaaa
aacacacaaggacacacacacacatacacacacacacacaagacaggacc
agataataacacctagatatccaatcacctgaaacaaagatgctcagcca
ccattcgaacaatactgggaataacatctaggacaacttgtctcttttag
agcccagcaactccgcagtagactctgatacaggcaatatagctgaaaca
tatgacaagggcttcaaaatagccataatgaatatgttcaagacctttaa
agaagatatgaataaaatccataaatagaatctacaaatacacaagcact
ggaaggaaataaagaaaagagtttaaggcattaacttggagatatcatca
ataaataaaacctaaacttgcataaatgaaatgaagagcttaggaatttt
gaaagaaacctagaggcagcctcttcatcagaatatccaagatcgaaaga
gaacctggcacaataaggcaggtaaataaatgattacttagcccagaaga
tattaaatttaaaagcaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112050646_112051201
seq2: B6Ng01-066F17.g_69_624

seq1  GAATTCCAGGGAGTAGAATCAGGTAACTATCTTGAAGTTAATCATCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGAGTAGAATCAGGTAACTATCTTGAAGTTAATCATCTTTG  50

seq1  GAGCACAGTCTCTCAAGAAACCAGCTGGCCATGTTGGCCAGGGAACCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGTCTCTCAAGAAACCAGCTGGCCATGTTGGCCAGGGAACCAAG  100

seq1  TGGGTAATCTTCACTCTCCATTCCATCCTCCAAGTCCACTTCCAGAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAATCTTCACTCTCCATTCCATCCTCCAAGTCCACTTCCAGAGTCT  150

seq1  TCACCCCAGTAGCAGACTCCCTGCAGGGGTCTGTCTTTCCTTTCTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCAGTAGCAGACTCCCTGCAGGGGTCTGTCTTTCCTTTCTTCCTC  200

seq1  TATTCCCTAGTGACTTCAGAGATCTTCATGGAAAACCAAGCCTCCCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTAGTGACTTCAGAGATCTTCATGGAAAACCAAGCCTCCCTCCC  250

seq1  TCCTTTGGTTACTTTCACATACCCATCATTCTAGCCCATCCGAATTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGTTACTTTCACATACCCATCATTCTAGCCCATCCGAATTCCTT  300

seq1  CATGTCAGCTCCCAATGCCTAGAAACAAGATCTGCCTGAGATCCCAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAGCTCCCAATGCCTAGAAACAAGATCTGCCTGAGATCCCAATTG  350

seq1  CCACAGTTTCAATAACACAGAATCACTCACTGCCTGGTACTGTACAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTTCAATAACACAGAATCACTCACTGCCTGGTACTGTACAAGCA  400

seq1  CTTCAAGTTCTGAAGATTCAGAGAAAGCAACAGGAACCAAGCAGTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTTCTGAAGATTCAGAGAAAGCAACAGGAACCAAGCAGTGAAAA  450

seq1  AACACACAAGGACACACACACACATACACACACACACACAAGACAGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAAGGACACACACACACATACACACACACACACAAGACAGGACC  500

seq1  AGATAATAACACCTAGATATCCAATCACCTGAAACAAAGATGCTCAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATAACACCTAGATATCCAATCACCTGAAACAAAGATGCTCAGCCA  550

seq1  CCATTC  556
      ||||||
seq2  CCATTC  556