BAC Information

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BAC

Clone NameB6Ng01-066I02
Chromosome14 (Build37)
Map Location 82,914,290 - 83,014,375
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066I02.bB6Ng01-066I02.g
ACCDH885664DH885665
length1,1521,106
definitionDH885664|Mus musculus domesticus DNA, BAC clone: B6Ng01-066I02, 5' end.DH885665|Mus musculus domesticus DNA, BAC clone: B6Ng01-066I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,914,290 - 82,915,461)(83,013,261 - 83,014,375)
sequence
gaattctttgtttagcccattaacccatttttaatatggttattttgttc
tctagagtctaacttcttgagttctttgtatatattagatattagccctc
tattaaatttagcattggtaaagatctgaaaagtagattttaccagtgtt
tctacagtaataatatttttatggacattgcaatagtcatttgtttgcca
gattttcattgttttcttaaaagatatgccaaacatttttgtttcacttt
gagttatcaacttaaatttagttactaagaaagattcatatatggcatta
attagaatctatggagatagtacctgaatattatgctagtgtttgtgatt
tgtttagatatatgcccttgacttcacaaagttccacacttaactttcag
aaagtttggttattcttttaaagactctaaaatgtattaagtcaaagtat
gtgccaacacttcatattcatgaaaacactgagccatgttagagaaatag
actgttgtctctccctcttctgttagccaagatttacttgatatgctcag
ttgacatatcaaacccacacactctgttctgcataactgaacaaaagcaa
ccctacctattggtgccaacatatttagtcatatgctgttctctatgcta
ctattaaagaacagtgttcaactaagtatatgtctgctaatatcagaacc
atttctacattagagaagctccttcctctgccacatgtgtgagtagttat
atgattttctttcctcagcatttccatcgttccatcaaatgcaatgtttt
ctgtgtcattggttcttaacttaggataagtttaccttagaagatattac
ctcttcctttctattttccttcatagaaaccttcctgatatatattccct
atgattgctgtctttatattttcctttatgtatcttagctcattttcctg
tttttgtgataaaacttctcttgagaaaacaacttgaggcagaaagattt
ccttttggctttagtacagggaatacatccatcatgacaagaacagagct
gactaatatgttaatgttcatttcagaaacatgactgacagaagcagcag
gcgttgcattcacagtggaccaggtaccactggtactactcagtaacacc
ag
gaattctagtgaatactgtttcttctgctatatccaatactatttcatgt
gcttttccagctctgttcttaaaagacaatttaaagcattaaagccagga
aattaaaattctaaggctcaaattgaaaatctaaagaacagaataaaaca
gattaggagaaaatgagaatttttttaacaagttggatattaattatgag
aagattatcaaaaatacagatgtataaatatagaaagttagaaaataggt
ttagaaacaataattctacaaaacatggaagaaaatggtggatattatat
tttattttaaaaacaataagctaatataatatcatgtttgtgtcattata
ttagatgaattgtgctacaaccaacttattttaattctattaagagtcaa
cttttaatttaatgttatattctgttagcaatacaaagagaaaagtattg
tgacaaattctagtgcaatatttgaaatctcttccctcaatcagatcatc
ctgccaaaaaaacacttagtctaaatcaataagtatataactccaggaga
agataggtcagaatgaattgaaacagacttatagtacaaagaacaaaaac
aaatcttccataattctgaaagctttctgttttatttcaatcattgtata
cacctgaatataactcatttaaaaaggcgtcatttgtaaattataggtct
cttacccatgggggtttgtttttaaaaaaacaaaaagttcctactttatt
tctttctccttttaaaagttccttaagaaatgtgttggctagtcatttgt
gtcttctttctttctttttctaaaaatcagcgaaacaatcaagtgatacg
attcctgagttataagaagaataaaatgggaaagtgctcttttctatcac
tttataaactgtttaaaaacattacaagatacatatatgtgcatcttgcc
aatgatacatagacagcatagagtcaaggtgctctctgattgatatagga
cccatagaaatgtactattcccagttctaggaaatcagagcagagggagg
tagcaggctaggaagatgcttttgtcatggaatactgcgttacattttga
gatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82914290_82915461
seq2: B6Ng01-066I02.b_43_1194

seq1  GAATTCTTTGTTTAGCCCATTAACCCATTTTTAATATGGTTATTTTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCCCATTAACCCATTTTTAATATGGTTATTTTGTTC  50

seq1  TCTAGAGTCTAACTTCTTGAGTTCTTTGTATATATTAGATATTAGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGTCTAACTTCTTGAGTTCTTTGTATATATTAGATATTAGCCCTC  100

seq1  TATTAAATTTAGCATTGGTAAAGATCTGAAAAGTAGATTTTACCAGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATTTAGCATTGGTAAAGATCTGAAAAGTAGATTTTACCAGTGTT  150

seq1  TCTACAGTAATAATATTTTTATGGACATTGCAATAGTCATTTGTTTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTAATAATATTTTTATGGACATTGCAATAGTCATTTGTTTGCCA  200

seq1  GATTTTCATTGTTTTCTTAAAAGATATGCCAAACATTTTTGTTTCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCATTGTTTTCTTAAAAGATATGCCAAACATTTTTGTTTCACTTT  250

seq1  GAGTTATCAACTTAAATTTAGTTACTAAGAAAGATTCATATATGGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATCAACTTAAATTTAGTTACTAAGAAAGATTCATATATGGCATTA  300

seq1  ATTAGAATCTATGGAGATAGTACCTGAATATTATGCTAGTGTTTGTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCTATGGAGATAGTACCTGAATATTATGCTAGTGTTTGTGATT  350

seq1  TGTTTAGATATATGCCCTTGACTTCACAAAGTTCCACACTTAACTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGATATATGCCCTTGACTTCACAAAGTTCCACACTTAACTTTCAG  400

seq1  AAAGTTTGGTTATTCTTTTAAAGACTCTAAAATGTATTAAGTCAAAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGGTTATTCTTTTAAAGACTCTAAAATGTATTAAGTCAAAGTAT  450

seq1  GTGCCAACACTTCATATTCATGAAAACACTGAGCCATGTTAGAGAAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAACACTTCATATTCATGAAAACACTGAGCCATGTTAGAGAAATAG  500

seq1  ACTGTTGTCTCTCCCTCTTCTGTTAGCCAAGATTTACTTGATATGCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTCTCTCCCTCTTCTGTTAGCCAAGATTTACTTGATATGCTCAG  550

seq1  TTGACATATCAAACCCACACACTCTGTTCTGCATAACTGAACAAAAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATATCAAACCCACACACTCTGTTCTGCATAACTGAACAAAAGCAA  600

seq1  CCCTACCTATTGGTGCCAACATATTTAGTCATATGCTGTTCTCTATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCTATTGGTGCCAACATATTTAGTCATATGCTGTTCTCTATGCTA  650

seq1  CTATTAAAGAACAGTGTTCAACTAAGTATATGTCTGCTAATATCAGAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAGAACAGTGTTCAACTAAGTATATGTCTGCTAATATCAGAACC  700

seq1  ATTTCTACATTAGAGAAGCTCCTTCCTCTGCCACATGTGTGAGTAGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACATTAGAGAAGCTCCTTCCTCTGCCACATGTGTGAGTAGTTAT  750

seq1  ATGATTTTCTTTCCTCAGCATTTCCATCGTTCCATCAAATGCAATGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTCTTTCCTCAGCATTTCCATCGTTCCATCAAATGCAATGTTTT  800

seq1  CTGTGTCATTGGTTCTTAACTTAGGATAAGTTTACCTTAGAAGATATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCATTGGTTCTTAACTTAGGATAAGTTTACCTTAGAAGATATTAC  850

seq1  CTCTTCCTTTCTATTTTCCTTCATAGAAACCTTCCTGATATATATTCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTTCTATTTTCCTTCATAGAAACCTTCCTGATATATATTCCCT  900

seq1  ATGATTGCTGTCTTTATATTTTCCTTTATGTATCTTAGCTCATTTTCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCTGTCTTTATATTTTCCTTTATGTATCTTAGCTCATTTTCCTG  950

seq1  TTTTTGTGATAAAACTTCTCTTGAGAAAAACAACTTGAGGCAGAAAGATT  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTTTGTGATAAAACTTCTCTTGAG-AAAACAACTTGAGGCAGAAAGATT  999

seq1  TCCTTTTGGCTTTAAGTACCAGGGAATACAATCCATCATGACAAGAACAG  1050
      ||||||||||||| |||| |||||||||| ||||||||||||||||||||
seq2  TCCTTTTGGCTTT-AGTA-CAGGGAATAC-ATCCATCATGACAAGAACAG  1046

seq1  AAGGCTGACTAATAATGTT-ATGTTCATTTCCAGAAACAATGACTGAGCA  1099
      |  |||||||||| ||||| |||||||||| ||||||| |||||||| ||
seq2  A--GCTGACTAAT-ATGTTAATGTTCATTT-CAGAAAC-ATGACTGA-CA  1090

seq1  GAAAGCCAGGCCAGGCGTTGCATTTCACAGTGGGCACCCAGTAACCCACT  1149
      |||   |||  ||||||||||| ||||||||||  |||  |||  |||||
seq2  GAA--GCAG--CAGGCGTTGCA-TTCACAGTGG--ACCAGGTA--CCACT  1131

seq1  GGTAACTTACTCAGTAACACCAG  1172
      ||||   ||||||||||||||||
seq2  GGTA--CTACTCAGTAACACCAG  1152

seq1: chr14_83013261_83014375
seq2: B6Ng01-066I02.g_68_1173 (reverse)

seq1  CAGATCTCAAAATTGTGACGCAAGTATTCCACTGACAAAAGCATCTTCCT  50
      |||||||||||| ||| |||| ||||||||| ||||||||||||||||||
seq2  CAGATCTCAAAA-TGTAACGC-AGTATTCCA-TGACAAAAGCATCTTCCT  47

seq1  AGCCCTGCTACCTCCCTTCTTGCTCCTGATTTCCTAGAACTGTGGATAGT  100
      || ||||||||||||||   |||| ||||||||||||||||| | |||||
seq2  AG-CCTGCTACCTCCCT--CTGCT-CTGATTTCCTAGAACTGGGAATAGT  93

seq1  ACATTTCTATGGGTCCTATATCAATCAGAAGAGCACCTTGACTCTATGGC  150
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  ACATTTCTATGGGTCCTATATCAATCAG-AGAGCACCTTGACTCTAT-GC  141

seq1  TGTCTATGTATCATTGGCAAGATGCACATATATGTATCTTGTAATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGTATCATTGGCAAGATGCACATATATGTATCTTGTAATGTTTT  191

seq1  TAAACAGTTTTATAAAGTGATAGAAAAGAGCACTTTCCCA-TTTATTCTT  249
      ||||||| |||||||||||||||||||||||||||||||| ||||||| |
seq2  TAAACAG-TTTATAAAGTGATAGAAAAGAGCACTTTCCCATTTTATTC-T  239

seq1  TCTTATAACTCAGGAATCGTATCACTTGATTG-TTCGCTGATTTTTAGAA  298
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTATAACTCAGGAATCGTATCACTTGATTGTTTCGCTGATTTTTAGAA  289

seq1  AAAGAAAGAAAGAAGACACAAATGACTAGCCAACACATTTCTTAAGGAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAGACACAAATGACTAGCCAACACATTTCTTAAGGAAC  339

seq1  TTTTAAAAGGAGAAAGAAATAAAGTAGGAACTTTTTGTTTTTTTAAAAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGGAGAAAGAAATAAAGTAGGAACTTTTTGTTTTTTTAAAAAC  389

seq1  AAACCCCCATGGGTAAGAGACCTATAATTTACAAATGACGCCTTTTTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCCATGGGTAAGAGACCTATAATTTACAAATGACGCCTTTTTAAA  439

seq1  TGAGTTATATTCAGGTGTATACAATGATTGAAATAAAACAGAAAGCTTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATATTCAGGTGTATACAATGATTGAAATAAAACAGAAAGCTTTC  489

seq1  AGAATTATGGAAGATTTGTTTTTGTTCTTTGTACTATAAGTCTGTTTCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATGGAAGATTTGTTTTTGTTCTTTGTACTATAAGTCTGTTTCAA  539

seq1  TTCATTCTGACCTATCTTCTCCTGGAGTTATATACTTATTGATTTAGACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTGACCTATCTTCTCCTGGAGTTATATACTTATTGATTTAGACT  589

seq1  AAGTGTTTTTTTGGCAGGATGATCTGATTGAGGGAAGAGATTTCAAATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTTTTGGCAGGATGATCTGATTGAGGGAAGAGATTTCAAATAT  639

seq1  TGCACTAGAATTTGTCACAATACTTTTCTCTTTGTATTGCTAACAGAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTAGAATTTGTCACAATACTTTTCTCTTTGTATTGCTAACAGAATA  689

seq1  TAACATTAAATTAAAAGTTGACTCTTAATAGAATTAAAATAAGTTGGTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTAAATTAAAAGTTGACTCTTAATAGAATTAAAATAAGTTGGTTG  739

seq1  TAGCACAATTCATCTAATATAATGACACAAACATGATATTATATTAGCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAATTCATCTAATATAATGACACAAACATGATATTATATTAGCTT  789

seq1  ATTGTTTTTAAAATAAAATATAATATCCACCATTTTCTTCCATGTTTTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTAAAATAAAATATAATATCCACCATTTTCTTCCATGTTTTGT  839

seq1  AGAATTATTGTTTCTAAACCTATTTTCTAACTTTCTATATTTATACATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATTGTTTCTAAACCTATTTTCTAACTTTCTATATTTATACATCT  889

seq1  GTATTTTTGATAATCTTCTCATAATTAATATCCAACTTGTTAAAAAAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGATAATCTTCTCATAATTAATATCCAACTTGTTAAAAAAATT  939

seq1  CTCATTTTCTCCTAATCTGTTTTATTCTGTTCTTTAGATTTTCAATTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTCTCCTAATCTGTTTTATTCTGTTCTTTAGATTTTCAATTTGA  989

seq1  GCCTTAGAATTTTAATTTCCTGGCTTTAATGCTTTAAATTGTCTTTTAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGAATTTTAATTTCCTGGCTTTAATGCTTTAAATTGTCTTTTAAG  1039

seq1  AACAGAGCTGGAAAAGCACATGAAATAGTATTGGATATAGCAGAAGAAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTGGAAAAGCACATGAAATAGTATTGGATATAGCAGAAGAAAC  1089

seq1  AGTATTCACTAGAATTC  1115
      |||||||||||||||||
seq2  AGTATTCACTAGAATTC  1106