BAC Information

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BAC

Clone NameB6Ng01-066P22
Chromosome14 (Build37)
Map Location 29,763,022 - 29,779,915
singlet/doubletdoublet
Overlap geneCacna2d3
Upstream geneErc2, LOC100040206, Wnt5a, LOC100040218
Downstream geneLrtm1, Ppia-ps15, EG665431
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P22.bB6Ng01-066P22.g
ACCDH886019DH886020
length851403
definitionDH886019|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P22, 5' end.DH886020|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,779,067 - 29,779,915)(29,763,022 - 29,763,430)
sequence
gaattcatcccttgattgattcataacaggcaccactgtttttggctgct
aacgagtgggaggataggagcaagtaggccattggagttatgttgcttgg
agacctaactttccctggctccatcctgtattcctttactgtgctttctg
gctcttgtcatatgaactggtccactccatcataccctccccaccatgct
ggactgaactttctaaagccatgagctaaaataaatccttcacccactaa
tttacttttctcagtatttggttgcagtaatgcaaaactctgacactata
cttacctaaatggcaatgggtctttcttggctctgactgttttgcccact
tgtctggtggcccaatggccatggtacacagcagctccatcagaagaaaa
taatctccacttcttgagtctatgattttttttggggggggttgatttca
gtgaataattaaactgttttcaagacttgtaagacagcaagcctacgaaa
tcctttaagggccaaactcattgctattagttactttagctgagtctttg
gcctgaatatatcccacctgcttctctatgatctaagaaccaggagccaa
gaacagatgcatcagtaatgtgggagataaagaaaaaaggagtagaaaat
ggccatcttttctttttttaaatacttgccacagctgagctgggttggac
caccatcttccttctgtctgtctgtcttctctttctccccttcctttctt
ccttcctttcttttctttctctctttctctctctctctctttctctctct
ctctctttctttctttcttttctctctctgtctctttctccctccctccc
t
atgccactgtgccctgatctgtgccctccatcatggccaggacttctcga
tgctggcactacttgctcagctatccatttgttgtaggtgctgtcatgag
tgttgtagaatgtctagcagcatgttggtctctacccactagatgccagt
agcaagctatgacaatcaaaactgtccccagatattgcagtgactgctgg
gagacagagcttcccttcagttaaacagtacagctccagacaaagcaagg
atcacagtaatgggctcttaaaatatagaaaggaaaggaaaggaaaggaa
aggaaaggaaaggaaaggaaaggaaagggaaagggaaagggaaagggaaa
gggaaagggaaagggaaagggaaagggaaagggaaagggaaagggaaagg
gaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29779067_29779915
seq2: B6Ng01-066P22.b_50_900 (reverse)

seq1  AGGGAGGGAGGGAGAAAGAGACAGAGAGAG-AAAGAAAGAAAGAAAGAGA  49
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGGAGGGAGGGAGAAAGAGACAGAGAGAGAAAAGAAAGAAAGAAAGAGA  50

seq1  GAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGAAAG-AAAGAAAGGAAG  98
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGAAAGAAAAGAAAGGAAG  100

seq1  GAAGAAAGGAAGGGGAGAAAGAGAAGACAGACAGACAGAAGGAAGATGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAGGGGAGAAAGAGAAGACAGACAGACAGAAGGAAGATGGT  150

seq1  GGTCCAACCCAGCTCAGCTGTGGCAAGTATTTAAAAAAAGAAAAGATGGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAACCCAGCTCAGCTGTGGCAAGTATTTAAAAAAAGAAAAGATGGC  200

seq1  CATTTTCTACTCCTTTTTTCTTTATCTCCCACATTACTGATGCATCTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTACTCCTTTTTTCTTTATCTCCCACATTACTGATGCATCTGTT  250

seq1  CTTGGCTCCTGGTTCTTAGATCATAGAGAAGCAGGTGGGATATATTCAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCCTGGTTCTTAGATCATAGAGAAGCAGGTGGGATATATTCAGG  300

seq1  CCAAAGACTCAGCTAAAGTAACTAATAGCAATGAGTTTGGCCCTTAAAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACTCAGCTAAAGTAACTAATAGCAATGAGTTTGGCCCTTAAAGG  350

seq1  ATTTCGTAGGCTTGCTGTCTTACAAGTCTTGAAAACAGTTTAATTATTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGTAGGCTTGCTGTCTTACAAGTCTTGAAAACAGTTTAATTATTCA  400

seq1  CTGAAATCAACCCCCCCCAAAAAAAATCATAGACTCAAGAAGTGGAGATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCAACCCCCCCCAAAAAAAATCATAGACTCAAGAAGTGGAGATT  450

seq1  ATTTTCTTCTGATGGAGCTGCTGTGTACCATGGCCATTGGGCCACCAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCTGATGGAGCTGCTGTGTACCATGGCCATTGGGCCACCAGAC  500

seq1  AAGTGGGCAAAACAGTCAGAGCCAAGAAAGACCCATTGCCATTTAGGTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCAAAACAGTCAGAGCCAAGAAAGACCCATTGCCATTTAGGTAA  550

seq1  GTATAGTGTCAGAGTTTTGCATTACTGCAACCAAATACTGAGAAAAGTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGTCAGAGTTTTGCATTACTGCAACCAAATACTGAGAAAAGTAA  600

seq1  ATTAGTGGGTGAAGGATTTATTTTAGCTCATGGCTTTAGAAAGTTCAGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGGGTGAAGGATTTATTTTAGCTCATGGCTTTAGAAAGTTCAGTC  650

seq1  CAGCATGGTGGGGAGGGTATGATGGAGTGGACCAGTTCATATGACAAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGTGGGGAGGGTATGATGGAGTGGACCAGTTCATATGACAAGAG  700

seq1  CCAGAAAGCACAGTAAAGGAATACAGGATGGAGCCAGGGAAAGTTAGGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGCACAGTAAAGGAATACAGGATGGAGCCAGGGAAAGTTAGGTC  750

seq1  TCCAAGCAACATAACTCCAATGGCCTACTTGCTCCTATCCTCCCACTCGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAACATAACTCCAATGGCCTACTTGCTCCTATCCTCCCACTCGT  800

seq1  TAGCAGCCAAAAACAGTGGTGCCTGTTATGAATCAATCAAGGGATGAATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCCAAAAACAGTGGTGCCTGTTATGAATCAATCAAGGGATGAATT  850

seq1  C  849
      |
seq2  C  851

seq1: chr14_29763022_29763430
seq2: B6Ng01-066P22.g_66_474

seq1  GAATTCATGCCACTGTGCCCTGATCTGTGCCCTCCATCATGGCCAGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCACTGTGCCCTGATCTGTGCCCTCCATCATGGCCAGGACT  50

seq1  TCTCGATGCTGGCACTACTTGCTCAGCTATCCATTTGTTGTAGGTGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGATGCTGGCACTACTTGCTCAGCTATCCATTTGTTGTAGGTGCTGT  100

seq1  CATGAGTGTTGTAGAATGTCTAGCAGCATGTTGGTCTCTACCCACTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTGTTGTAGAATGTCTAGCAGCATGTTGGTCTCTACCCACTAGAT  150

seq1  GCCAGTAGCAAGCTATGACAATCAAAACTGTCCCCAGATATTGCAGTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTAGCAAGCTATGACAATCAAAACTGTCCCCAGATATTGCAGTGAC  200

seq1  TGCTGGGAGACAGAGCTTCCCTTCAGTTAAACAGTACAGCTCCAGACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAGACAGAGCTTCCCTTCAGTTAAACAGTACAGCTCCAGACAAA  250

seq1  GCAAGGATCACAGTAATGGGCTCTTAAAATATAGAAAGGAAAGGAAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATCACAGTAATGGGCTCTTAAAATATAGAAAGGAAAGGAAAGGA  300

seq1  AAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGGAAAGGGAAAGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGGAAAGGGAAAGGGAAA  350

seq1  GGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGG  400

seq1  GAAAGGGAA  409
      |||||||||
seq2  GAAAGGGAA  409