BAC Information

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BAC

Clone NameB6Ng01-067K04
Chromosome14 (Build37)
Map Location 78,983,268 - 79,206,524
singlet/doubletdoublet
Overlap geneDgkh, LOC673649
Upstream geneD230005D02Rik, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
Downstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067K04.bB6Ng01-067K04.g
ACCDH886458DH886459
length41789
definitionDH886458|Mus musculus domesticus DNA, BAC clone: B6Ng01-067K04, 5' end.DH886459|Mus musculus domesticus DNA, BAC clone: B6Ng01-067K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,206,111 - 79,206,524)(78,983,268 - 78,983,356)
sequence
gggaattctttgttcagctctgagccccatccttttaatggggctatttg
attttctggagtccaccttcttcagttctttatatatattagacattagt
ccccaatctgatttaggataggtaaagatcctttcccagtctgttggtgg
ctttttgtcttattgacggtgtcttttgccttacagaagctttgcaattt
tatgaggtcccatttgtcaattctcgatcttacagcacaagccattgctg
ttctattcaggaattttttcccctgtgcccatatcttcaaggcttttcac
agttaagaaactaaatttcaaaaccctttcccacacactcttctttgaat
aaggtgtcctcaaatgtaactagatccttcagttttaactcctctgaggt
ggaggtggggtggggag
actcttgcaaactgtcttctgatctccacatgtgctctgtggctaccttc
catccccaaaaggaaggaagggagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79206111_79206524
seq2: B6Ng01-067K04.b_53_467 (reverse)

seq1  CTCCCCACCCCACCTCCACCTCAGAGGAGTTAAAACTGAAGGATCTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACCCCACCTCCACCTCAGAGGAGTTAAAACTGAAGGATCTAGTT  50

seq1  ACATTTGAGGACACCTTATTCAAAGAAGAGTGTGTGGGAAAGGGTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAGGACACCTTATTCAAAGAAGAGTGTGTGGGAAAGGGTTTTGA  100

seq1  AATTTAGTTTCTTAACTGTGAAAAGCCTTGAAGATATGGGCACAGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTTTCTTAACTGTGAAAAGCCTTGAAGATATGGGCACAGGGGAA  150

seq1  AAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTG  200

seq1  ACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACC  250

seq1  GTCAATAAGACAAAAAGCCACCAACAGACTGGGAAAGGATCTTTACCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAAGACAAAAAGCCACCAACAGACTGGGAAAGGATCTTTACCTAT  300

seq1  CCTAAATCAGATTGGGGACTAATGTCTAATATATATAAAGAACTGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATCAGATTGGGGACTAATGTCTAATATATATAAAGAACTGAAGAA  350

seq1  GGTGGACTCCAGAAAATCAAATAGCCCCATTAAAA-AATGGGGCTCAGAG  399
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  GGTGGACTCCAGAAAATCAAATAGCCCCATTAAAAGGATGGGGCTCAGAG  400

seq1  CTGAACAAAGAATTC  414
      |||||||||||||||
seq2  CTGAACAAAGAATTC  415

seq1: chr14_78983268_78983356
seq2: B6Ng01-067K04.g_75_163

seq1  ACTCTTGCAAACTGTCTTCTGATCTCCACATGTGCTCTGTGGCTACCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCAAACTGTCTTCTGATCTCCACATGTGCTCTGTGGCTACCTTC  50

seq1  CATCCCCAAAAGGAAGGAAGGGAGGGAGGGAGGGAGGGA  89
      |||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAAAAGGAAGGAAGGGAGGGAGGGAGGGAGGGA  89