BAC Information

Click to search

BAC

Clone NameB6Ng01-069J06
Chromosome14 (Build37)
Map Location 112,353,817 - 112,354,962
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622052, LOC100043491, LOC100043494, Slitrk5, LOC100043501
Downstream geneEG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069J06.bB6Ng01-069J06.g
ACCDH887843DH887844
length1,1201,103
definitionDH887843|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J06, 5' end.DH887844|Mus musculus domesticus DNA, BAC clone: B6Ng01-069J06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacccaaaactcaaccaatatataaaatgtttttaattgcaa
atttaatatcatttcctgccttaccttcctttcttggctactagttatat
aatttggattatccagaaactttgctaagaagtaaagccaaatgttgcaa
ctctctctagttaatatgtaactacagaatttatgttattcttgtatttt
tatgaataatgtacaaagctatacatttaaaagcctacatttagtactta
catttatttgaagtattgacaacaatatttgtctttgcatgtgctttaat
ttaggaaattcagttatcagaaatatttactaaaagtcactgacatcctt
atttttcaattaattgctacaaaaatctacatttgaagaaaacataagaa
attccacccttagccaactagatcagaaatgatctcatcagagtggaatt
tactctgcaattcaaatttcttgtttcattttgaaaacaataatggagat
tagtgaagttaaactcttttttattactattattacctttttttcccttt
tttttacagtccacccattggtcaccttctgattccccatcccacagttc
ctcaccccattcctcctctttgcctataagtggatgttcccaccaccatg
accaggcctccctaatccctggagcttcaagtcttaaatggaacctactg
agaaatgctgccaagtccatataactttgaatcaagcagaatggactaat
gtcaggctgtaaaacaatgaatgctgttcattgagactgaaatattaatg
ggagatttcaacactaacaacatttcaaagtacaagaaagaacttatcat
taagctgtagctaaaatacagtttataggtgaaaattttgcttctgttat
gctgatggaataaataaaagtgcaaagaattcatttttgcaagtcaaatt
tactaggaagatatttaaagatagccccaagcaaaagaaactgttgtata
tgcttatgtagataaccgcataatcaaatatctgttcataattttagttc
tttgtacatgattaaaataaacatcagcactgagacaaatgcttggcttg
tttacagtgcacattttgat
gaattctctgtttagatctgttccctattttttaataagattatttggtt
tttctagagtctaacttcttgagttcagtgtatatagtagatagtagccc
tctatctgatgtaggattggtaaagatcttttcccaatctgttggttgtc
attttgtcctattgacagtgtcatttgcctcacagaagctttgcaatttt
atgaggtcccatttgtcaatcttggatcttagagcataagccattggtgt
tctgttcaggaaagtttcccctatgcccatgtgttcaaggatttttctca
ctttctcttctattagcttcagtttttctggtattatgtggagttccttg
atccacttgcacttgagctttgtacagggagataagaatggatcaatttg
catttttctacatgttgatccccagttgaaacagcaccatttgttggaaa
tctgtcttttttgccactggatggttttagcttctttgtcaaagatcaag
tgaccctagatgtgtgggttcatttctgagacttcaaatctattccattg
atcaacctgcctgtcactgaaccagtaacatgtagtttttatcaccattg
ctctgaagcacagctggaggtcaggtatggtgattccttcagaagttctt
ttattgttgaggagagttttcactatcctgggttttttgttttttttgtt
tttttgttttttttttttttttatttcaaatgaatttgcaaattgctcta
actctgtgaagaattgagttggaattttgatggggattgcattgaatctg
tagatttcttttggtaagatgatcatttttactatgatagtaaatgccaa
accatgagcactggagatcctttccatcttttgagaatttcttttcttca
gaggacttgaagttcttatcatacagatcctttcacttgcttggtcagag
tcacaccaaggtatttatatatttgtgactatgggagtgtgccatttccc
taattcttcctcagcctgttatgcttgagagggagagtcatgaattgttg
gagtattttatctcagctacttgatagaggtgttatcagtataggagtct
cct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112353817_112354962
seq2: B6Ng01-069J06.b_43_1162

seq1  GAATTCTTTACCCAAAACTCAACCAATATATAAAATGTTTTTAATTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCCAAAACTCAACCAATATATAAAATGTTTTTAATTGCAA  50

seq1  ATTTAATATCATTTCCTGCCTTACCTTCCTTTCTTGGCTACTAGTTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATATCATTTCCTGCCTTACCTTCCTTTCTTGGCTACTAGTTATAT  100

seq1  AATTTGGATTATCCAGAAACTTTGCTAAGAAGTAAAGCCAAATGTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGATTATCCAGAAACTTTGCTAAGAAGTAAAGCCAAATGTTGCAA  150

seq1  CTCTCTCTAGTTAATATGTAACTACAGAATTTATGTTATTCTTGTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAGTTAATATGTAACTACAGAATTTATGTTATTCTTGTATTTT  200

seq1  TATGAATAATGTACAAAGCTATACATTTAAAAGCCTACATTTAGTACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAATGTACAAAGCTATACATTTAAAAGCCTACATTTAGTACTTA  250

seq1  CATTTATTTGAAGTATTGACAACAATATTTGTCTTTGCATGTGCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTGAAGTATTGACAACAATATTTGTCTTTGCATGTGCTTTAAT  300

seq1  TTAGGAAATTCAGTTATCAGAAATATTTACTAAAAGTCACTGACATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAATTCAGTTATCAGAAATATTTACTAAAAGTCACTGACATCCTT  350

seq1  ATTTTTCAATTAATTGCTACAAAAATCTACATTTGAAGAAAACATAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAATTAATTGCTACAAAAATCTACATTTGAAGAAAACATAAGAA  400

seq1  ATTCCACCCTTAGCCAACTAGATCAGAAATGATCTCATCAGAGTGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACCCTTAGCCAACTAGATCAGAAATGATCTCATCAGAGTGGAATT  450

seq1  TACTCTGCAATTCAAATTTCTTGTTTCATTTTGAAAACAATAATGGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAATTCAAATTTCTTGTTTCATTTTGAAAACAATAATGGAGAT  500

seq1  TAGTGAAGTTAAACTCTTTTTTATTACTATTATTACCTTTTTTTCCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGTTAAACTCTTTTTTATTACTATTATTACCTTTTTTTCCCTTT  550

seq1  TTTTTACAGTCCACCCATTGGTCACCTTCTGATTCCCCATCCCACAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAGTCCACCCATTGGTCACCTTCTGATTCCCCATCCCACAGTTC  600

seq1  CTCACCCCATTCCTCCTCTTTGCCTATAAGTGGATGTTCCCACCACCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCATTCCTCCTCTTTGCCTATAAGTGGATGTTCCCACCACCATG  650

seq1  ACCAGGCCTCCCTAATCCCTGGAGCTTCAAGTCTTAAATGGAACCTACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCCTCCCTAATCCCTGGAGCTTCAAGTCTTAAATGGAACCTACTG  700

seq1  AGAAATGCTGCCAAGTCCATATAACTTTGAATCAAGCAGAATGGACTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTGCCAAGTCCATATAACTTTGAATCAAGCAGAATGGACTAAT  750

seq1  GTCAGGCTGTAAAACAATGAATGCTGTTCATTGAGACTGAAATATTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTGTAAAACAATGAATGCTGTTCATTGAGACTGAAATATTAATG  800

seq1  GGAGATTTCAACACTAACAACATTTCAAAGTACAAGAAAGAACTTATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTCAACACTAACAACATTTCAAAGTACAAGAAAGAACTTATCAT  850

seq1  TAAGCTGTAGCTAAAAATACAGTTTATAGGTGAAAATTTTGCTTCTGTTA  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGTAGCT-AAAATACAGTTTATAGGTGAAAATTTTGCTTCTGTTA  899

seq1  TGCTGATGGAATAAATAAAAGGTGCAAAGAATTCATTTTTGCAAGTCAAA  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTGATGGAATAAATAAAA-GTGCAAAGAATTCATTTTTGCAAGTCAAA  948

seq1  TTTACTAGGAAGATATTTAAAAGAATAGCCCCAAGCCAAAAAAGAAACTG  1000
      |||||||||||||||||||||   ||||||||||||   |||||||||||
seq2  TTTACTAGGAAGATATTTAAA--GATAGCCCCAAGC---AAAAGAAACTG  993

seq1  TTGTAATAATGCTTATGTAGATAAACCGCATAATCAAAATAATCTGTTCA  1050
      |||||   |||||||||||||| |||||||||||||||   |||||||| 
seq2  TTGTA--TATGCTTATGTAGAT-AACCGCATAATCAAA--TATCTGTTC-  1037

seq1  ATAAAATTTTAAGTTCCTTTGTACCAATGAATAAAATATAACATCAGCCA  1100
      ||||   ||| |||| ||||||||  |||| ||||||| |||||||| ||
seq2  ATAA---TTTTAGTT-CTTTGTAC--ATGATTAAAATA-AACATCAG-CA  1079

seq1  CTGGAGACAAAATGCTTTTGGCTCTGTTTACAGTGCACATTTTGAT  1146
      || ||||| ||||||  |||||| ||||||||||||||||||||||
seq2  CT-GAGAC-AAATGC--TTGGCT-TGTTTACAGTGCACATTTTGAT  1120