BAC Information

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BAC

Clone NameB6Ng01-069M19
Chromosome14 (Build37)
Map Location 21,278,836 - 21,448,643
singlet/doubletdoublet
Overlap geneAnxa7, Zmynd17, Ppp3cb, Usp54
Upstream gene1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18
Downstream geneMyoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk, Myst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069M19.bB6Ng01-069M19.g
ACCDH887995DH887996
length1,120902
definitionDH887995|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M19, 5' end.DH887996|Mus musculus domesticus DNA, BAC clone: B6Ng01-069M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,278,836 - 21,279,966)(21,447,740 - 21,448,643)
sequence
gaattcccacacatctaggtgtcagggcaccagaaacacattaaagagtc
tcacttactgtgtttattaatagtacggtatgttctgagggctcaaaatg
atgctcagtgtgctatatatacaagcagagcatgcgattaaccccagcac
ttaggaggtagaggcaggtggatctttgtgagttcgaggtcaactagatc
tacagcatgaagccctgtctcaataaataagtaaattatgtattaatttt
acattaaaaaagatgttttgtggtagtactattagctccttggagctttc
tcattcattaaaaggtctatgatatactggggtcttcttgcagtactcaa
caaagatatacaaatgaaagccaaatcaccttaaacaaacaaacaatcct
tttggtcgcaccatcaatcactcatagaatcatatacaaaatacaggatt
cactcagtttctgcctgaacagattctggggatactatagcaactgtaac
cattcaatgaaaaacaaaataaggtagagtgcaaaagtgccttacagatg
gtcttcaaaccactttcaacgtatcccgaaaattctcggcttacactgct
tagcaaatcgcgattagccatctgcaaacaaaaatgtcagagttaagcat
tttcgtatcgtaaaatgaacagcacatcttcaggagagttcaaacccacc
ctggaataagcctccatagtggccttcagctgagggaagctccttgtggc
gagaatcatgttgaaacaggattcatccgttcccagtctcccctccccgg
cctgatagagacgctgagcgtcctcctgggccatctggtggttcacgctc
tgcctctcgtcacggtttccctgcaagagaaggcaggaattagagatgaa
attctttctccaatctagtcactttgggatctgtcaaacgtggctgcatc
gagtctgccacaaagccctgcctttccaaatcactattccatgacacttg
gttttggactttggaattatggtcaggttttgtaagttagagtagggctt
cgagctttgagcgctaaattacaacaaaatgtctttaacaggaagggatg
ttactatctttcaatgaaaa
gaattccaggacagccagggatgtacagagaaaccctttctcgaaaacaa
aaaaacaaacaaaaaacaaaaagaacccaaaccaacaacaacaacaacaa
atatatatatattatttattaaaaaaaaagaagcatatctgagtgctggc
ataaatgaatactgacaaacttaagagcattccaaggaaggtagacagat
tcataagtagtttgaaaaccatttagataggaaacataggatttgtgata
gaggtggtagtgaaaaaatttaaaactacaaaaaatagcataacatctgt
atccctccacccacaattaactatctatcaccatcatttcatttaattta
atttctgagacagtctgttggtagagtacctgctgggaattgaaaccagt
ctttgtacattctgggcaagcactttatcagctgagactagctccacctc
tagttggtaatttcttaactttttttttttcaagccttttaacacttgat
agataatattttgaatttcttgttctataactgtaaaatatgacttctca
agagacatgtttgctttttcgagacagggtttctctgtatagccctggct
gtcctggaactcactttgtagaccaggctggtgtcaaactcataaatcca
cctgcctctgcctcccaagttctgggatcaaaagtgtgcaccaccatgcc
tggcttaagagacatgttttaagaattttaaagtttttttttaaagatgt
atttatttatacatgtaagtataatgtagctgtcttcagacacactagaa
agaggctgtgagatctcattatggatggttgtgagccaccatgtggttgc
tgggatttgaactcagaactttagaagagcaaacgtgctctttacccctg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21278836_21279966
seq2: B6Ng01-069M19.b_48_1167

seq1  GAATTCCCACACATCTAGGTGTCAGGGCACCAGAAACACATTAAAGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACACATCTAGGTGTCAGGGCACCAGAAACACATTAAAGAGTC  50

seq1  TCACTTACTGTGTTTATTAATAGTACGGTATGTTCTGAGGGCTCAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTACTGTGTTTATTAATAGTACGGTATGTTCTGAGGGCTCAAAATG  100

seq1  ATGCTCAGTGTGCTATATATACAAGCAGAGCATGCGATTAACCCCAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGTGTGCTATATATACAAGCAGAGCATGCGATTAACCCCAGCAC  150

seq1  TTAGGAGGTAGAGGCAGGTGGATCTTTGTGAGTTCGAGGTCAACTAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGGTAGAGGCAGGTGGATCTTTGTGAGTTCGAGGTCAACTAGATC  200

seq1  TACAGCATGAAGCCCTGTCTCAATAAATAAGTAAATTATGTATTAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCATGAAGCCCTGTCTCAATAAATAAGTAAATTATGTATTAATTTT  250

seq1  ACATTAAAAAAGATGTTTTGTGGTAGTACTATTAGCTCCTTGGAGCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAAAAGATGTTTTGTGGTAGTACTATTAGCTCCTTGGAGCTTTC  300

seq1  TCATTCATTAAAAGGTCTATGATATACTGGGGTCTTCTTGCAGTACTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTAAAAGGTCTATGATATACTGGGGTCTTCTTGCAGTACTCAA  350

seq1  CAAAGATATACAAATGAAAGCCAAATCACCTTAAACAAACAAACAATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATATACAAATGAAAGCCAAATCACCTTAAACAAACAAACAATCCT  400

seq1  TTTGGTCGCACCATCAATCACTCATAGAATCATATACAAAATACAGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCGCACCATCAATCACTCATAGAATCATATACAAAATACAGGATT  450

seq1  CACTCAGTTTCTGCCTGAACAGATTCTGGGGATACTATAGCAACTGTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTTTCTGCCTGAACAGATTCTGGGGATACTATAGCAACTGTAAC  500

seq1  CATTCAATGAAAAACAAAATAAGGTAGAGTGCAAAAGTGCCTTACAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATGAAAAACAAAATAAGGTAGAGTGCAAAAGTGCCTTACAGATG  550

seq1  GTCTTCAAACCACTTTCAACGTATCCCGAAAATTCTCGGCTTACACTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAACCACTTTCAACGTATCCCGAAAATTCTCGGCTTACACTGCT  600

seq1  TAGCAAATCGCGATTAGCCATCTGCAAACAAAAATGTCAGAGTTAAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAATCGCGATTAGCCATCTGCAAACAAAAATGTCAGAGTTAAGCAT  650

seq1  TTTCGTATCGTAAAATGAACAGCACATCTTCAGGAGAGTTCAAACCCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTATCGTAAAATGAACAGCACATCTTCAGGAGAGTTCAAACCCACC  700

seq1  CTGGAATAAGCCTCCATAGTGGCCTTCAGCTGAGGGAAGCTCCTTGTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATAAGCCTCCATAGTGGCCTTCAGCTGAGGGAAGCTCCTTGTGGC  750

seq1  GAGAATCATGTTGAAACAGGATTCATCCGTTCCCAGTCTCCCCTCCCCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCATGTTGAAACAGGATTCATCCGTTCCCAGTCTCCCCTCCCCGG  800

seq1  CCTGATAGAGACGCTGAGCGTCCTCCTGGGCCATCTGGTGGTTCACGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAGAGACGCTGAGCGTCCTCCTGGGCCATCTGGTGGTTCACGCTC  850

seq1  TGCCTCTCGTCACGGTTTCCCTGCAAGAGGAAGGCAGGAATTAGAGATGA  900
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCCTCTCGTCACGGTTTCCCTGCAAGA-GAAGGCAGGAATTAGAGATGA  899

seq1  AATTCTTTCTCCAATCTAGTCACTTTGGGATCTGTCAAACGTGGCTGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTCTCCAATCTAGTCACTTTGGGATCTGTCAAACGTGGCTGCAT  949

seq1  CGAGTCTGCCACAAAGGCCCTGCCTTTCCAAATCACTATTCCATGACACT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGAGTCTGCCACAAA-GCCCTGCCTTTCCAAATCACTATTCCATGACACT  998

seq1  TGGTTTTGGACTTTGGAATATATGGTCAGGGTTTTGTAAGGTTAGAGTAA  1050
      ||||||||||||||||||| |||||||| |||||||||| |||||||| |
seq2  TGGTTTTGGACTTTGGAAT-TATGGTCA-GGTTTTGTAA-GTTAGAGT-A  1044

seq1  GGGCTTCGGAGCTTTGAGCGCTAAATTACAACAAGATGTCTTTAACAAGG  1100
      ||||||| |||||||||||||||||||||||||| ||||||||||| |||
seq2  GGGCTTC-GAGCTTTGAGCGCTAAATTACAACAAAATGTCTTTAAC-AGG  1092

seq1  AAGGGATTGTAAACTATCTTTCAAATGAAAA  1131
      |||||||  |  |||||||||| ||||||||
seq2  AAGGGATGTT--ACTATCTTTC-AATGAAAA  1120

seq1: chr14_21447740_21448643
seq2: B6Ng01-069M19.g_70_971 (reverse)

seq1  CTCAGGGGTAAAGAGCACTGTCTGCTCTTCTAAAGGTTCTGAGTTCAAAT  50
      |||||||||||||||||| || |||||||||||| |||||||||||||||
seq2  CTCAGGGGTAAAGAGCAC-GTTTGCTCTTCTAAA-GTTCTGAGTTCAAAT  48

seq1  CCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTCACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTCACAGC  98

seq1  CTC-TTCTAGTGTGTCTGAAGACAGCTACATTATACTTACATGTAATAAA  149
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCTTTCTAGTGTGTCTGAAGACAGCTACATTATACTTACATGT-ATAAA  147

seq1  TAAATACATCTTTAAAAAAAAACTTTAAAATTCTTAAAACATGTCTCTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATCTTTAAAAAAAAACTTTAAAATTCTTAAAACATGTCTCTTA  197

seq1  AGCCAGGCATGGTGGTGCACACTTTTGATCCCAGAACTTGGGAGGCAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCATGGTGGTGCACACTTTTGATCCCAGAACTTGGGAGGCAGAG  247

seq1  GCAGGTGGATTTATGAGTTTGACACCAGCCTGGTCTACAAAGTGAGTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATTTATGAGTTTGACACCAGCCTGGTCTACAAAGTGAGTTCC  297

seq1  AGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAGCAAACATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAGCAAACATG  347

seq1  TCTCTTGAGAAGTCATATTTTACAGTTATAGAACAAGAAATTCAAAATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGAAGTCATATTTTACAGTTATAGAACAAGAAATTCAAAATAT  397

seq1  TATCTATCAAGTGTTAAAAGGCTTGAAAAAAAAAAAGTTAAGAAATTACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCAAGTGTTAAAAGGCTTGAAAAAAAAAAAGTTAAGAAATTACC  447

seq1  AACTAGAGGTGGAGCTAGTCTCAGCTGATAAAGTGCTTGCCCAGAATGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGGTGGAGCTAGTCTCAGCTGATAAAGTGCTTGCCCAGAATGTA  497

seq1  CAAAGACTGGTTTCAATTCCCAGCAGGTACTCTACCAACAGACTGTCTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTGGTTTCAATTCCCAGCAGGTACTCTACCAACAGACTGTCTCA  547

seq1  GAAATTAAATTAAATGAAATGATGGTGATAGATAGTTAATTGTGGGTGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAATTAAATGAAATGATGGTGATAGATAGTTAATTGTGGGTGGA  597

seq1  GGGATACAGATGTTATGCTATTTTTTGTAGTTTTAAATTTTTTCACTACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACAGATGTTATGCTATTTTTTGTAGTTTTAAATTTTTTCACTACC  647

seq1  ACCTCTATCACAAATCCTATGTTTCCTATCTAAATGGTTTTCAAACTACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATCACAAATCCTATGTTTCCTATCTAAATGGTTTTCAAACTACT  697

seq1  TATGAATCTGTCTACCTTCCTTGGAATGCTCTTAAGTTTGTCAGTATTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCTGTCTACCTTCCTTGGAATGCTCTTAAGTTTGTCAGTATTCA  747

seq1  TTTATGCCAGCACTCAGATATGCTTCTTTTTTTTTAATAAATAATATATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCAGCACTCAGATATGCTTCTTTTTTTTTAATAAATAATATATA  797

seq1  TATATTTGTTGTTGTTGTTGTTGGTTTGGGTTCTTTTTGTTTTTTGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTTGTTGTTGTTGTTGGTTTGGGTTCTTTTTGTTTTTTGTTTG  847

seq1  TTTTTTTGTTTTCGAGAAAGGGTTTCTCTGTACATCCCTGGCTGTCCTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTTCGAGAAAGGGTTTCTCTGTACATCCCTGGCTGTCCTGG  897

seq1  AATTC  904
      |||||
seq2  AATTC  902