BAC Information

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BAC

Clone NameB6Ng01-070M04
Chromosome14 (Build37)
Map Location 47,645,600 - 47,646,272
singlet/doubletsinglet
Overlap geneSamd4
Upstream geneLOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1
Downstream geneGch1, Wdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070M04.bB6Ng01-070M04.g
ACCDH888658DH888659
length6921,229
definitionDH888658|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M04, 5' end.DH888659|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaagtatttagtggtgatcatgctgcccccagttctctcagg
gacattcatttttgtgtgtgtgtatgtgacttatgataccaagttggtat
caataccaaagacttttttaaaatgcagtgtggtcttgactagaaatggg
gttagtgatatgaattgatgggtataatcagaagccatttactatacaca
aattcatacccaaaaaaaatgtacataagaactgccagcaagagcttgct
ggcaggagcctgatgtagctgtctcctaagaggctctgccagtgcctgac
aaatacagaagtggatgctcacagccatccattggaaggagctagagaaa
gtacccaaggagctaaaggggtttgcagccccctagggggaaacaacaat
atgaactaaccagtacccccagagctccctgggactaaaccaccaaccaa
agaaaacacatggtggactcatggctctagctgcatatgtatcagaggat
ggactagttggtcatcaatgatgcccttggtcctgtgaaggctctatggc
ccagtataggcaaatgccagagccagaaagcaggagtgggtgagcagggg
aaggaggaggggatgggggttttcggatgggaaaccagttaaaggggata
attttgaaatgtaatttatgtggtggtctaagaataaagaaa
gaattccattcatatatacaatgtatttagatcagatttccgcctcaccc
ctcctaattttcttttatccttctgtgccccactcttccttcctgccctc
cccttcccaactttctgcctttaaatttttatatttatgttttaataaat
gtatatttataaatgtaaatttgcgaaacctatggcgtccatatgttcat
ggttatgtggccatccactggactgtttggcctgctgggagtaacatcct
taaagaaaccgactctcccaagaagccatcaactgagataagagacttag
gtgtggggcttgtgagcctctccccatccatgctggattcttgataaaaa
accaaacctggccaggcatggtggcccacgcctttaatcccagcacttgg
gaggcagaggcaggcgaatttctgagttccaggtcagccttgtctacaga
gtgagttccaggacagccagggctacacagagaaaccctgtcttaaaaaa
accaaaaaccaaaccaaaacaaaaaaccctaatttttcaaaaaaagtaac
aatttcataataatttccataaagttatttttttatttcacagtatgagt
gttttgtcttcctgtacatatgtacaccacatgtacacaggggccctcgg
aggctagaggaaggcatcagatcccttgaaactggagttacagacgtgtg
acccagcacgtgggtgctgccattccaccagatcctatatgtaagctgag
ccagccctagagagcctgatattttttttttaaaagcttgtggacaaaca
taggtatttatattgtttgtttgcctggtgctttattattctttgttgac
ttatggcagaaattatttaattacttgatactctgcatgttttcccttcg
cttctggattctgttcatttcttgcccctgggaagtttgtcacttttcca
cctttttccctgtcacacctttctctctttccagtgcctgtctttccatg
ggagtgacttctggtcatctgtgacaggctgcttgcatactaagtcttcc
tctggttgtccttactgtagctttgagctagcagcttttcctcatgtgtt
atctaggaccttgcatctcttaacctcttgaggttccaggcatctaagct
tcacttcaagtccagtgccttctctcttggctctgcaggacctccctgta
cacaaatcttggtcctctcaaggtagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_47645600_47646272
seq2: B6Ng01-070M04.b_45_736

seq1  GAATTCACTAAGTATTTAGTGGTGATCATGCTGCCCCCAGTTCTCTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGTATTTAGTGGTGATCATGCTGCCCCCAGTTCTCTCAGG  50

seq1  GACATTCATTTTTGTGTGTGTGTATGTGACTTATGATACCAAGTTGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCATTTTTGTGTGTGTGTATGTGACTTATGATACCAAGTTGGTAT  100

seq1  CAATACCAAAGACTTTTTTAAAATGCAGTGTGGTCTTGACTAGAAATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCAAAGACTTTTTTAAAATGCAGTGTGGTCTTGACTAGAAATGGG  150

seq1  GTTAGTGATATGAATTGATGGGTATAATCAGAAGCCATTTACTATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGATATGAATTGATGGGTATAATCAGAAGCCATTTACTATACACA  200

seq1  AATTCATACCCAAAAAAAATGTACATAAGAACTGCCAGCAAGAGCTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATACCCAAAAAAAATGTACATAAGAACTGCCAGCAAGAGCTTGCT  250

seq1  GGCAGGAGCCTGATGTAGCTGTCTCCTAAGAGGCTCTGCCAGTGCCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGCCTGATGTAGCTGTCTCCTAAGAGGCTCTGCCAGTGCCTGAC  300

seq1  AAATACAGAAGTGGATGCTCACAGCCATCCATTGGAAGGAGCTAGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAAGTGGATGCTCACAGCCATCCATTGGAAGGAGCTAGAGAAA  350

seq1  GTACCCAAGGAGCTAAAGGGGTTTGCAGCCCCCTAGGGGGAAACAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAAGGAGCTAAAGGGGTTTGCAGCCCCCTAGGGGGAAACAACAAT  400

seq1  ATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAA  450

seq1  AGAAAACACATGGTGGACTCATGGCTCTAGCTGCATATGTATCAGAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACATGGTGGACTCATGGCTCTAGCTGCATATGTATCAGAGGAT  500

seq1  GGACTAGTTGGTCATCAATGATGCCCTTGGTCCTGTGAAGGCTCTATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGTTGGTCATCAATGATGCCCTTGGTCCTGTGAAGGCTCTATGGC  550

seq1  CCAGTATAGGCAAATGCCAGAGCCAGAAAGCAGGAGTGGGTGAGCAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATAGGCAAATGCCAGAGCCAGAAAGCAGGAGTGGGTGAGCAGGGG  600

seq1  AAGGAGGAGGGGATGGGGGTTTTCGGAGGGGAAACCAG-GAAAGGGGATA  649
      ||||||||||||||||||||||||||| ||||||||||  ||||||||||
seq2  AAGGAGGAGGGGATGGGGGTTTTCGGATGGGAAACCAGTTAAAGGGGATA  650

seq1  ACATTTGAAATGTA-------------------AATAAAGAAA  673
      |  |||||||||||                   ||||||||||
seq2  A-TTTTGAAATGTAATTTATGTGGTGGTCTAAGAATAAAGAAA  692