BAC Information

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BAC

Clone NameB6Ng01-071K09
Chromosome14 (Build37)
Map Location 7,535,881 - 7,537,006
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675
Downstream geneLOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071K09.bB6Ng01-071K09.g
ACCDH889289DH889290
length1,1201,230
definitionDH889289|Mus musculus domesticus DNA, BAC clone: B6Ng01-071K09, 5' end.DH889290|Mus musculus domesticus DNA, BAC clone: B6Ng01-071K09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttaaaaaacattgatattttatttctagtttgtgatttgcat
aaatttttagtatacagacatataaaatgtatgcaagtatagaaatttac
aaaatgaaagtcagagtttacagtaacttctatttcttcttaatcattag
aatacatgtacaattgatatccagcaaaagttccaatcttttagaattag
agagattctcatattcaatcaccacaaccacagatttcctcagtcaccag
ctcttaatctaaatcactggtgaggcattgcttgctaacttttcaaatcc
atatacaaagcagttaatagcgcctacaataatcatgctatgtagcactg
agaagcatatctttccaggcaggtagtaacttgcagggtcaacaagtgct
gaggctggaggattatttcaggatttggttcttctaccatgtggacccaa
gatcaaactcaagtaatcatgtttggcgagtggcacatttacccattgta
ccatttaactggaccctcaaacagttattacatgaattaaagcacagtat
ggttccatggagctttttcttctctgcttaatcttggttatcacttaccc
ctctgcactatttaaaaatttccacttgcccctaaatcagataggggact
aatatccaatgtatatctaaagaactcaagaaggtggactccagaagatc
aaataaccccattaaaaatggggctcaaaactaaacaaagaattctcacc
tgaggaataccaaatggctgagaagcacctgaaaaaaaatgctcaacatc
cttaatcatcagggaaatgcaaatcaaaacaacactggagaaagaggaac
aatcctccattgttggtgggattgcaagcttgtacagccactctggaatc
agtctggtggtttctcagaaaattggacatagtattacaggaggatcccg
caatacctcttctgggcatatatccagaagatgttccactggtaataagg
acacatgctccactatgttcatagcagccttatttataatagcccagaag
ctggaaagacccagatgccttcacaaggaatggatacagaaatggggtca
ctttaccaatggagcactac
gaattccacataaaaccagagacactgaaacttatagaggagaaagtggg
gaaaagcatagaagatatgggcacagggggaaagttcctgaatagaacag
gaatggcttgtgctgtaagattgagaatggacaaatgggacctcatgaaa
ctgcaaagcttctgtaaagcaaaagacaccgtcaataagacaaaaaggcc
accaataggttgggaaaggatatttacctatcccaaatcggataggggac
taataaccaatatgtataaagaacacaagaaggtggacttcagaaaatcc
aataacaccattaaaaagtggggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatgtcagagaagcacttgaaaaatgttcagcattctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattccacttcacac
cagtcagaatggctaagatcaaaaattctggtgacagcagatgctggcaa
ggatgtggagaaaaaggaacatttctccgttgttggtgggattgcaagct
tgtacaaccactctggaaatcagtctggcagttcctcagaaaattggaca
taggactactggaggatcccagaataccactcctgggcatatatccagaa
gatgttccaactggtaagaaggacacatgctccactatgttcatagcagc
cttatttattatagccagaagctggaaataacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatttacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggatggacct
ggagggcatcatactgagtgaggtaacccaatcacaaaagatttcacatg
atatgtactcactggtaagtggatattatcccagaaacttagatacccaa
gatatgagatacaatttgcaaaacacagaaactcaggaggactaagaccg
aagtggtggacactttgccccttcttatatggggaacaaaacacccagga
aagagttacagagacaaattgggagttgagaaggaaggatgtatcatcta
gaacttgcataagaggtggaggcctccggccagctatttgatggatcctg
gccaccaatggaggactgagtagttcctagagactatggatctggtccac
ccttataatgtggaccaaatttgtaaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7535881_7537006
seq2: B6Ng01-071K09.b_45_1164 (reverse)

seq1  GTAGTGCTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTG  50
      |||||||||||||| |||||   ||| || ||||||||||||||||| ||
seq2  GTAGTGCTCCATTG-GTAAAGTGACCCCA-TTTCTGTATCCATTCCT-TG  47

seq1  TTGAAGGGCATCTGGGTTCTTTCCAGCTTCT-GGCTATTATAAATAAGGC  99
       |||| |||||||||| |||||||||||||| ||||||||||||||||||
seq2  -TGAA-GGCATCTGGG-TCTTTCCAGCTTCTGGGCTATTATAAATAAGGC  94

seq1  TGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTGGAACATCTT  149
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAG-TGGAACATCTT  143

seq1  CTGGATATATGCCCAGAAGAGGTATTGCGGGATCCTCCTGTAATACTATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATATATGCCCAGAAGAGGTATTGCGGGATCCTCCTGTAATACTATG  193

seq1  TCCAATTTTCTGAGAAACCACCAGACTGATTTCCAGAGTGGCTGTACAAG  249
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCAATTTTCTGAGAAACCACCAGACTGA-TTCCAGAGTGGCTGTACAAG  242

seq1  CTTGCAATCCCACCAACAATGGAGGATTGTTCCTCTTTCTCCAGTGTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATCCCACCAACAATGGAGGATTGTTCCTCTTTCTCCAGTGTTGT  292

seq1  TTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAGCATTTTTTTTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAGCATTTTTTTTCAG  342

seq1  GTGCTTCTCAGCCATTTGGTATTCCTCAGGTGAGAATTCTTTGTTTAGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTCAGCCATTTGGTATTCCTCAGGTGAGAATTCTTTGTTTAGTT  392

seq1  TTGAGCCCCATTTTTAATGGGGTTATTTGATCTTCTGGAGTCCACCTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCCCATTTTTAATGGGGTTATTTGATCTTCTGGAGTCCACCTTCT  442

seq1  TGAGTTCTTTAGATATACATTGGATATTAGTCCCCTATCTGATTTAGGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTTTAGATATACATTGGATATTAGTCCCCTATCTGATTTAGGGG  492

seq1  CAAGTGGAAATTTTTAAACAGTGCAGAGGGGTAAGTGATAACCAAGACTA  549
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  CAAGTGGAAATTTTTAAATAGTGCAGAGGGGTAAGTGATAACCAAGATTA  542

seq1  AGCAGAGAAGAAAAAGCTCCATGGAACCATACTGTGCTTTAATTCATGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAAGAAAAAGCTCCATGGAACCATACTGTGCTTTAATTCATGTA  592

seq1  ATAACTGTTTGAGGGTCCAGTTAAATGGTACAATGGGTAAATGTGCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGTTTGAGGGTCCAGTTAAATGGTACAATGGGTAAATGTGCCACT  642

seq1  CGCCAAACATGATTACTTGAGTTTGATCTTGGGTCCACATGGTAGAAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAACATGATTACTTGAGTTTGATCTTGGGTCCACATGGTAGAAGAA  692

seq1  CCAAATCCTGAAATAATCCTCCAGCCTCAGCACTTGTTGACCCTGCAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCCTGAAATAATCCTCCAGCCTCAGCACTTGTTGACCCTGCAAGT  742

seq1  TACTACCTGCCTGTAAAGATATGCTTCTCAGTGCTACATAGCATGATTAT  799
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACTACCTGCCTGGAAAGATATGCTTCTCAGTGCTACATAGCATGATTAT  792

seq1  TGTAGGCGCTATTAACTGCTTTGTATATGGATTTGAAAAGTTAGCAAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCGCTATTAACTGCTTTGTATATGGATTTGAAAAGTTAGCAAGCA  842

seq1  ATGCCTCACCAGTGATTTAGATTAAGAGCTGGTGACTGAGGAAATCTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCACCAGTGATTTAGATTAAGAGCTGGTGACTGAGGAAATCTGTG  892

seq1  GTTGTGGTGATTGAATATGAGAATCTCTCTAATTCTAAAAGATTGGAACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGTGATTGAATATGAGAATCTCTCTAATTCTAAAAGATTGGAACT  942

seq1  TTTGCTGGATATCAATTGTACATGTATTCTAATGATTAAGAAGAAATAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGATATCAATTGTACATGTATTCTAATGATTAAGAAGAAATAGA  992

seq1  AGTTACTGTAAACTCTGACTTTCATTTTGTAAATTTCTATACTTGCATAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTGTAAACTCTGACTTTCATTTTGTAAATTTCTATACTTGCATAC  1042

seq1  ATTTTATATGTCTGTATACT-AAAATGTATGCAAATCACAAACTAGAAAT  1098
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  ATTTTATATGTCTGTATACTAAAAATTTATGCAAATCACAAACTAGAAAT  1092

seq1  AAAATATCAATGTTTTTTAAGAGAATTC  1126
      ||||||||||||||||||||||||||||
seq2  AAAATATCAATGTTTTTTAAGAGAATTC  1120