BAC Information

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BAC

Clone NameB6Ng01-072C16
Chromosome14 (Build37)
Map Location 63,007,825 - 63,174,119
singlet/doubletdoublet
Overlap geneGucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059
Upstream geneKpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253, Dleu7, Rnaseh2b
Downstream geneE130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072C16.bB6Ng01-072C16.g
ACCDH889657DH889658
length787719
definitionDH889657|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C16, 5' end.DH889658|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,007,825 - 63,008,610)(63,173,402 - 63,174,119)
sequence
gaattcagaatcctctgaaaattttcggactgcaccatgcagaaactcag
agcagtttctctttgggagacagagtctctcaagccacctttaaagaatg
attcagccagttggttgacatatcattatcacattttgaagttaacacag
ccccagagtctatgaatgctcaccccacagttaattattcttgagttttt
ctgtgctctcaaaacatattctacttatgtaatgatccctcgggggagca
ccaggtgcctttgtcccacagacagggccagctgtgtaaaacctctgcat
ctgtcaggtttctctatgtggcacataattgcctgatttccatctgaaag
tgcagcactgacattaaagccacatagaacccaccattgataacaatggc
ttcccgacacctagaagaagcatggggggtgggggggcaaataaacatgc
tccccaaatgagcgcttgccttcacaggggctgggtctgaatgtacagct
gcagatgaagagaacaaaccaagaggaataaaggaaatgaaagctacaga
ttagcattcggctgtctcagccagatggtcttctggggagagcggtcctc
cgcttgctttcttcagtctccaggctagcacacagcacccactctctgca
ggggcagcagtgatctcacccctcagccaggcaacccagtgaatcactca
ctctttctttctcacacaactgtgagccaatgaaaacttgaaagtgaaag
aaagactaagaagggattggggggtggggggggcggg
gaattcattatcgccttgctcactgacccaacttgctagagaatgtattc
ttttgttatctatcttaaaataacacgaagagtcctgggtgtgcttccat
tcaaaggggtctggcagcaagagggtgatggacattgacgttgttaaacc
cagccatcccttaggatgggttaataattgaagtagcaggaagtcatttt
tccactctagccagtgaggcaacttgggagcggcggcggtggtggggtaa
gaacaacttagacttaattctggtggtgttgtcattagaagcagtggaag
gcacttaagtgtatgtcgtattcgcttttgtagggtagtgctgaagacgc
aaccttgagcatgttctgccaaccagctatgaccctgtcatcttttcttt
tcagacaagttatttaacctcctggagccttaattttttcgcatattggg
ctactgctatcttctctgtctgttgtgagttacaagagatcacgtctgtg
atcgtccctgaacctccattttgagttacaagagatcatgtctgtaaaac
agtttgcgtgtgagttctgctacatgccaagtactggttacgggagctgt
cagtgtcccaggtgaaggctagctacctgcatgccctctcaactggcaca
gcggtgtcactttctgtgtgacaagctgtgaagaacaatcctcttccttc
cttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63007825_63008610
seq2: B6Ng01-072C16.b_44_830

seq1  GAATTCAGAATCCTCTGAAAATTTTCGGACTGCACCATGCAGAAACTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATCCTCTGAAAATTTTCGGACTGCACCATGCAGAAACTCAG  50

seq1  AGCAGTTTCTCTTTGGGAGACAGAGTCTCTCAAGCCACCTTTAAAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTCTCTTTGGGAGACAGAGTCTCTCAAGCCACCTTTAAAGAATG  100

seq1  ATTCAGCCAGTTGGTTGACATATCATTATCACATTTTGAAGTTAACACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCCAGTTGGTTGACATATCATTATCACATTTTGAAGTTAACACAG  150

seq1  CCCCAGAGTCTATGAATGCTCACCCCACAGTTAATTATTCTTGAGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGTCTATGAATGCTCACCCCACAGTTAATTATTCTTGAGTTTTT  200

seq1  CTGTGCTCTCAAAACATATTCTACTTATGTAATGATCCCTCGGGGGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCTCAAAACATATTCTACTTATGTAATGATCCCTCGGGGGAGCA  250

seq1  CCAGGTGCCTTTGTCCCACAGACAGGGCCAGCTGTGTAAAACCTCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCCTTTGTCCCACAGACAGGGCCAGCTGTGTAAAACCTCTGCAT  300

seq1  CTGTCAGGTTTCTCTATGTGGCACATAATTGCCTGATTTCCATCTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGTTTCTCTATGTGGCACATAATTGCCTGATTTCCATCTGAAAG  350

seq1  TGCAGCACTGACATTAAAGCCACATAGAACCCACCATTGATAACAATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCACTGACATTAAAGCCACATAGAACCCACCATTGATAACAATGGC  400

seq1  TTCCCGACACCTAGAAGAAGCATGGGGGGTGGGGGGGCAAATAAACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGACACCTAGAAGAAGCATGGGGGGTGGGGGGGCAAATAAACATGC  450

seq1  TCCCCAAATGAGCGCTTGCCTTCACAGGGGCTGGGTCTGAATGTACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAATGAGCGCTTGCCTTCACAGGGGCTGGGTCTGAATGTACAGCT  500

seq1  GCAGATGAAGAGAACAAACCAAGAGGAATAAAGGAAATGAAAGCTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGAAGAGAACAAACCAAGAGGAATAAAGGAAATGAAAGCTACAGA  550

seq1  TTAGCATTCGGCTGTCTCAGCCAGATGGTCTTCTGGGGAGAGCGGTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTCGGCTGTCTCAGCCAGATGGTCTTCTGGGGAGAGCGGTCCTC  600

seq1  CGCTTGCTTTCTTCAGTCTCCAGGCTAGCACACAGCACCCACTCTCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGCTTTCTTCAGTCTCCAGGCTAGCACACAGCACCCACTCTCTGCA  650

seq1  GGGGCAGCAGTGATCTCACCCCTCAGCCAGGCAACCCAGTGAATCACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGCAGTGATCTCACCCCTCAGCCAGGCAACCCAGTGAATCACTCA  700

seq1  CTCTTTCTTTCTCACACAACTGTGAGCCAATGAAAACTTGAAAGTGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTTCTCACACAACTGTGAGCCAATGAAAACTTGAAAGTGAAAG  750

seq1  AAAGACTAAGAAGGGATTGGGGGGT-GGGGGGGCGGG  786
      ||||||||||||||||||||||||| |||||||||||
seq2  AAAGACTAAGAAGGGATTGGGGGGTGGGGGGGGCGGG  787

seq1: chr14_63173402_63174119
seq2: B6Ng01-072C16.g_69_787 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGAGGATTGTTCTTCACAGCTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGAGGATTGTTCTTCACAGCTTGTC  50

seq1  ACACAG-AAGTGACACCGCTGTGCCAGTTGAGAGGGCATGCAGGTAGCTA  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAAGTGACACCGCTGTGCCAGTTGAGAGGGCATGCAGGTAGCTA  100

seq1  GCCTTCACCTGGGACACTGACAGCTCCCGTAACCAGTACTTGGCATGTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACCTGGGACACTGACAGCTCCCGTAACCAGTACTTGGCATGTAG  150

seq1  CAGAACTCACACGCAAACTGTTTTACAGACATGATCTCTTGTAACTCAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTCACACGCAAACTGTTTTACAGACATGATCTCTTGTAACTCAAA  200

seq1  ATGGAGGTTCAGGGACGATCACAGACGTGATCTCTTGTAACTCACAACAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTTCAGGGACGATCACAGACGTGATCTCTTGTAACTCACAACAG  250

seq1  ACAGAGAAGATAGCAGTAGCCCAATATGCGAAAAAATTAAGGCTCCAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGATAGCAGTAGCCCAATATGCGAAAAAATTAAGGCTCCAGGA  300

seq1  GGTTAAATAACTTGTCTGAAAAGAAAAGATGACAGGGTCATAGCTGGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAATAACTTGTCTGAAAAGAAAAGATGACAGGGTCATAGCTGGTTG  350

seq1  GCAGAACATGCTCAAGGTTGCGTCTTCAGCACTACCCTACAAAAGCGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACATGCTCAAGGTTGCGTCTTCAGCACTACCCTACAAAAGCGAAT  400

seq1  ACGACATACACTTAAGTGCCTTCCACTGCTTCTAATGACAACACCACCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACATACACTTAAGTGCCTTCCACTGCTTCTAATGACAACACCACCAG  450

seq1  AATTAAGTCTAAGTTGTTCTTACCCCACCACCGCCGCCGCTCCCAAGTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTCTAAGTTGTTCTTACCCCACCACCGCCGCCGCTCCCAAGTTG  500

seq1  CCTCACTGGCTAGAGTGGAAAAATGACTTCCTGCTACTTCAATTATTAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGGCTAGAGTGGAAAAATGACTTCCTGCTACTTCAATTATTAAC  550

seq1  CCATCCTAAGGGATGGCTGGGTTTAACAACGTCAATGTCCATCACCCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTAAGGGATGGCTGGGTTTAACAACGTCAATGTCCATCACCCTCT  600

seq1  TGCTGCCAGACCCCTTTGAATGGAAGCACACCCAGGACTCTTCGTGTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCAGACCCCTTTGAATGGAAGCACACCCAGGACTCTTCGTGTTAT  650

seq1  TTTAAGATAGATAACAAAAGAATACATTCTCTAGCAAGTTGGGTCAGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATAGATAACAAAAGAATACATTCTCTAGCAAGTTGGGTCAGTGA  700

seq1  GCAAGGCGATAATGAATTC  718
      |||||||||||||||||||
seq2  GCAAGGCGATAATGAATTC  719