BAC Information

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BAC

Clone NameB6Ng01-072H15
Chromosome14 (Build37)
Map Location 23,167,408 - 23,331,634
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072H15.bB6Ng01-072H15.g
ACCDH889886DH889887
length1,157476
definitionDH889886|Mus musculus domesticus DNA, BAC clone: B6Ng01-072H15, 5' end.DH889887|Mus musculus domesticus DNA, BAC clone: B6Ng01-072H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,167,408 - 23,168,560)(23,331,153 - 23,331,634)
sequence
gaattcagcatttgtgactgagtgtggtggtgcctgttttaatcccagca
ctcagcaggcagaggcaagtgggtcttcgtgagttttaattttagttttg
gtctagatagctatttcctggctggcctggcctaaggtgaaaccctctca
aaaacacagtatttgtaaatttaaagagtcttaactgcacaagatctcct
tttatgaatatgccatgtgtacttggggaaatgtatcttctgccattgtt
tggcctatagttatcactcagcagtatcaaatctcctatatccctaacta
gattttgtttggttaagtacatctattaccaagaagggtatacattatta
ttagtggcaattatgtatttttcagctttaccttctaaacgtgtacttta
tgccttatcagtttagactccatgtattacatttatgacctatgtgtgct
cttcatggtctgacctgctagtcagtatatagtatcattactgtatcatc
actgtacagcagcatcactgtgcagcatcatcactgtacagcagcatcac
tgtacagcagcatcactgtacagcagcatcactgtacagcagcatcactg
tacagcatcatcactgtacagcagcatcactgtacagcagcatcactgta
cagcagcatcactgtacagcagcatcactgtacagcatcatcactgtaca
gcagcatcactgtacagcagcatcactgtacaacagcatcactgtacagc
atcatcactgtacagcagcatcactgtacagcagcatcactgtacagcag
catcactgtacagcagcatcactgtacagcagcatcactgtacagcagca
tcactgtacagcagcatcactgtacagcagcatcactgtacagcagcatc
actgtacagcagcatcactgtacagcagcatcactgtacagcagcattac
tgtgcagcagcatcactgtgcagcagcatcactgtgcagcagcatcactg
cacattgtcactgtgcagcatcatcactgcaacattgtcactggtgcagc
agcatcactggtgcagcatcatcacctgcaacattgtcactgtggtagca
gcatcactgtgcaacagttgtcactatgtagaatcatcactggcagcagc
atcactg
aacatcacacacaaactgtaatttctggaaagtatgccagaggaagcccc
agcccttgtgtgtctatttacgtgggctgcagatagagagaggcccagga
tatgagatcctggcatagaggaacttctgaaggtcttgacagctcctcca
agaataaaggcagaagacgacggcttctgactcactgctccaggcctctc
tccgatctcttatgtatttggacatcagtcaggcccatcagatccccagt
ctgctgtctgctgactgacaacagaaaaagaaatttagaggtgtgagtga
agtgacagagctgtcagggcttcttctgaaatgactcttttcttaaagaa
aggaaagataacagaaaaaaaaaaaaccaaaaaacaaaaaaaccctcaga
cagctcaataccatgtcacagttgctgggacaggtctgtattttggtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23167408_23168560
seq2: B6Ng01-072H15.b_45_1201

seq1  GAATTCAGCATTTGTGACTGAGTGTGGTGGTGCCTGTTTTAATCCCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTGTGACTGAGTGTGGTGGTGCCTGTTTTAATCCCAGCA  50

seq1  CTCAGCAGGCAGAGGCAAGTGGGTCTTCGTGAGTTTTAATTTTAGTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGGCAGAGGCAAGTGGGTCTTCGTGAGTTTTAATTTTAGTTTTG  100

seq1  GTCTAGATAGCTATTTCCTGGCTGGCCTGGCCTAAGGTGAAACCCTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGATAGCTATTTCCTGGCTGGCCTGGCCTAAGGTGAAACCCTCTCA  150

seq1  AAAACACAGTATTTGTAAATTTAAAGAGTCTTAACTGCACAAGATCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAGTATTTGTAAATTTAAAGAGTCTTAACTGCACAAGATCTCCT  200

seq1  TTTATGAATATGCCATGTGTACTTGGGGAAATGTATCTTCTGCCATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATATGCCATGTGTACTTGGGGAAATGTATCTTCTGCCATTGTT  250

seq1  TGGCCTATAGTTATCACTCAGCAGTATCAAATCTCCTATATCCCTAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATAGTTATCACTCAGCAGTATCAAATCTCCTATATCCCTAACTA  300

seq1  GATTTTGTTTGGTTAAGTACATCTATTACCAAGAAGGGTATACATTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTTTGGTTAAGTACATCTATTACCAAGAAGGGTATACATTATTA  350

seq1  TTAGTGGCAATTATGTATTTTTCAGCTTTACCTTCTAAACGTGTACTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGCAATTATGTATTTTTCAGCTTTACCTTCTAAACGTGTACTTTA  400

seq1  TGCCTTATCAGTTTAGACTCCATGTATTACATTTATGACCTATGTGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATCAGTTTAGACTCCATGTATTACATTTATGACCTATGTGTGCT  450

seq1  CTTCATGGTCTGACCTGCTAGTCAGTATATAGTATCATTACTGTATCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGTCTGACCTGCTAGTCAGTATATAGTATCATTACTGTATCATC  500

seq1  ACTGTACAGCAGCATCACTGTGCAGCATCATCACTGTACAGCAGCATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAGCAGCATCACTGTGCAGCATCATCACTGTACAGCAGCATCAC  550

seq1  TGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTG  600

seq1  TACAGCATCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCATCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTA  650

seq1  CAGCAGCATCACTGTACAGCAGCATCACTGTACAGCATCATCACTGTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCATCACTGTACAGCAGCATCACTGTACAGCATCATCACTGTACA  700

seq1  GCAGCATCACTGTACAGCAGCATCACTGTACAACAGCATCACTGTACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCACTGTACAGCAGCATCACTGTACAACAGCATCACTGTACAGC  750

seq1  ATCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAG  800

seq1  CATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCA  850

seq1  TCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATC  900

seq1  ACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAGCAGCATCACTGTACAGCAGCATCACTGTACAGCAGCATTAC  950

seq1  TGTGCAGCAGCATCACTGTGCAGCAGCATCACTGTGCAGCAGCATCACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCAGCATCACTGTGCAGCAGCATCACTGTGCAGCAGCATCACTG  1000

seq1  CAACATTGTCACTGTGCAGCATCATCACTGCAACATTGTCACT-GTGCAG  1049
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  C-ACATTGTCACTGTGCAGCATCATCACTGCAACATTGTCACTGGTGCAG  1049

seq1  CAGCATCACT-GTGCAGCATCATCA-CTGCAACATTGTCACTGT-GTAGC  1096
      |||||||||| |||||||||||||| |||||||||||||||||| |||||
seq2  CAGCATCACTGGTGCAGCATCATCACCTGCAACATTGTCACTGTGGTAGC  1099

seq1  AGCATCACTGTGCAACAGTGGTCACTATGTAGCATCATCACT-GCAGCAG  1145
      ||||||||||||||||||| |||||||||||| ||||||||| |||||||
seq2  AGCATCACTGTGCAACAGTTGTCACTATGTAGAATCATCACTGGCAGCAG  1149

seq1  CATCACTG  1153
      ||||||||
seq2  CATCACTG  1157

seq1: chr14_23331153_23331634
seq2: B6Ng01-072H15.g_67_548 (reverse)

seq1  CACACACACACACACACACACACACACACACCAAAATACAGACCTGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACCAAAATACAGACCTGTCCC  50

seq1  AGCAACTGTGACATGGTATTGAGCTGTCTGAGGGTTTTTTTGTTTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGTGACATGGTATTGAGCTGTCTGAGGGTTTTTTTGTTTTTTGG  100

seq1  TTTTTTTTTTTTCTGTTATCTTTCCTTTCTTTAAGAAAAGAGTCATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTCTGTTATCTTTCCTTTCTTTAAGAAAAGAGTCATTTCA  150

seq1  GAAGAAGCCCTGACAGCTCTGTCACTTCACTCACACCTCTAAATTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCCCTGACAGCTCTGTCACTTCACTCACACCTCTAAATTTCTTT  200

seq1  TTCTGTTGTCAGTCAGCAGACAGCAGACTGGGGATCTGATGGGCCTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGTCAGTCAGCAGACAGCAGACTGGGGATCTGATGGGCCTGACT  250

seq1  GATGTCCAAATACATAAGAGATCGGAGAGAGGCCTGGAGCAGTGAGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCAAATACATAAGAGATCGGAGAGAGGCCTGGAGCAGTGAGTCAG  300

seq1  AAGCCGTCGTCTTCTGCCTTTATTCTTGGAGGAGCTGTCAAGACCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGTCGTCTTCTGCCTTTATTCTTGGAGGAGCTGTCAAGACCTTCAG  350

seq1  AAGTTCCTCTATGCCAGGATCTCATATCCTGGGCCTCTCTCTATCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTCTATGCCAGGATCTCATATCCTGGGCCTCTCTCTATCTGCAG  400

seq1  CCCACGTAAATAGACACACAAGGGCTGGGGCTTCCTCTGGCATACTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTAAATAGACACACAAGGGCTGGGGCTTCCTCTGGCATACTTTCC  450

seq1  AGAAATTACAGTTTGTGTGTGATGTTGAATTC  482
      ||||||||||||||||||||||||||||||||
seq2  AGAAATTACAGTTTGTGTGTGATGTTGAATTC  482