BAC Information

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BAC

Clone NameB6Ng01-073C14
Chromosome14 (Build37)
Map Location 79,866,617 - 80,045,132
singlet/doubletdoublet
Overlap geneWbp4, Elf1, LOC668560, Sugt1, Lect1
Upstream geneAkap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879
Downstream genePcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073C14.bB6Ng01-073C14.g
ACCDH890374DH890375
length1,126148
definitionDH890374|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C14, 5' end.DH890375|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,866,617 - 79,867,753)(80,044,985 - 80,045,132)
sequence
gaattccttttgtattctacaatgattcctaactcatcccttatgcagcc
caggtcgggctgaacttcgaattttcccatctttgcttatcccgtgccac
atgctctgcaacatgcttgtcttgttccctttccctagacagggtctcac
tgtgatgccctagctggcctcatttcaagatctccactgggtagatgcct
aaatccactatgtcaaaccacacacatccaataatggtaagtttagttta
taagtcaggtacagtaagagattaactgcaggagtaaatggcaaacttca
acaatacactgtaatgtaagatttcatcgtgtcatacacgttaaaatcta
tgaatcctttttctggattttctatttcgtattttcagattggagctgac
caggagtaacagcagcatggagtcagcctgcaaaggtctgtggaaagtca
agtgagaccccaccttaaactttatgattagcttcttggtctctgtggag
gcctctccagctttcttctgttccccttcggaatcactgtgagaatcgga
ggacttggcgtcttctagggtgtcgggcaactttccactgtccttactag
aaagcacatccccgccatgtgggatgaaatcttcaggcttttcccatttg
gattctgctcaacacattttaataactgcattacttatttagcaatactt
ctcagcaatgtaacactttatcatctactaccaccaaataatacagcatt
ttcatatctatactttattttttattgttcagaaaatttaggagagtctg
cacttactaacttactagttataaactaactctaaatgggaaagaacttg
gaaagggggtaagagttttaaaaatccccagtttatctgaaaacaatttc
agaaccataatgataatgactttacaaatatttccagaaacttctcacag
agactccctggagttttcatctgaatttgctacttcactagaaatgggtc
ttcagcctggctgagctcctccgccatctaatggtcgctgtgctggcaag
gaaccacaatgtcttcccactctcattttagttaacaaaggagaaaaaag
atcatttgttccagttaagacaattt
tccctgtcttcctggctcttgggagccccctccactggcctgagcgtggt
gggactcatgtagcttgggatgtgtgtaggctgagtcttggtaattagca
tgagagatacaagagaaggaaaatgacgaggtgggggtgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79866617_79867753
seq2: B6Ng01-073C14.b_45_1170

seq1  GAATTCCTTTTGTATTCTACAATGATTCCTAACTCATCCCTTATGCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGTATTCTACAATGATTCCTAACTCATCCCTTATGCAGCC  50

seq1  CAGGTCGGGCTGAACTTCGAATTTTCCCATCTTTGCTTATCCCGTGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCGGGCTGAACTTCGAATTTTCCCATCTTTGCTTATCCCGTGCCAC  100

seq1  ATGCTCTGCAACATGCTTGTCTTGTTCCCTTTCCCTAGACAGGGTCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGCAACATGCTTGTCTTGTTCCCTTTCCCTAGACAGGGTCTCAC  150

seq1  TGTGATGCCCTAGCTGGCCTCATTTCAAGATCTCCACTGGGTAGATGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGCCCTAGCTGGCCTCATTTCAAGATCTCCACTGGGTAGATGCCT  200

seq1  AAATCCACTATGTCAAACCACACACATCCAATAATGGTAAGTTTAGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACTATGTCAAACCACACACATCCAATAATGGTAAGTTTAGTTTA  250

seq1  TAAGTCAGGTACAGTAAGAGATTAACTGCAGGAGTAAATGGCAAACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAGGTACAGTAAGAGATTAACTGCAGGAGTAAATGGCAAACTTCA  300

seq1  ACAATACACTGTAATGTAAGATTTCATCGTGTCATACACGTTAAAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACACTGTAATGTAAGATTTCATCGTGTCATACACGTTAAAATCTA  350

seq1  TGAATCCTTTTTCTGGATTTTCTATTTCGTATTTTCAGATTGGAGCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTTTTTCTGGATTTTCTATTTCGTATTTTCAGATTGGAGCTGAC  400

seq1  CAGGAGTAACAGCAGCATGGAGTCAGCCTGCAAAGGTCTGTGGAAAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTAACAGCAGCATGGAGTCAGCCTGCAAAGGTCTGTGGAAAGTCA  450

seq1  AGTGAGACCCCACCTTAAACTTTATGATTAGCTTCTTGGTCTCTGTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACCCCACCTTAAACTTTATGATTAGCTTCTTGGTCTCTGTGGAG  500

seq1  GCCTCTCCAGCTTTCTTCTGTTCCCCTTCGGAATCACTGTGAGAATCGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCAGCTTTCTTCTGTTCCCCTTCGGAATCACTGTGAGAATCGGA  550

seq1  GGACTTGGCGTCTTCTAGGGTGTCGGGCAACTTTCCACTGTCCTTACTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGCGTCTTCTAGGGTGTCGGGCAACTTTCCACTGTCCTTACTAG  600

seq1  AAAGCACATCCCCGCCATGTGGGATGAAATCTTCAGGCTTTTCCCATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACATCCCCGCCATGTGGGATGAAATCTTCAGGCTTTTCCCATTTG  650

seq1  GATTCTGCTCAACACATTTTAATAACTGCATTACTTATTTAGCAATACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGCTCAACACATTTTAATAACTGCATTACTTATTTAGCAATACTT  700

seq1  CTCAGCAATGTAACACTTTATCATCTACTACCACCAAATAATACAGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAATGTAACACTTTATCATCTACTACCACCAAATAATACAGCATT  750

seq1  TTCATATCTATACTTTATTTTTTATTGTTCAGAAAATTTAGGAGAGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTATACTTTATTTTTTATTGTTCAGAAAATTTAGGAGAGTCTG  800

seq1  CACTTACTAACTTACTAGTTATAAACTAACTCTAAATGGGAAAGAACTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTAACTTACTAGTTATAAACTAACTCTAAATGGGAAAGAACTTG  850

seq1  GAAAGGGGGTAAGAGTTTTAAAAATCCCCAGTTTATCTGAAAACAATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGGTAAGAGTTTTAAAAATCCCCAGTTTATCTGAAAACAATTTC  900

seq1  AAGAACCATAATGATAATGACTTTACAAATATTTCCAGAAACTTCTCACA  950
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGAACCATAATGATAATGACTTTACAAATATTTCCAGAAACTTCTCACA  949

seq1  GAGACTTCCTGGAGTTTTCCATCTGAATTTGCTACTTCACTAGAAATGGG  1000
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGACTCCCTGGAGTTTT-CATCTGAATTTGCTACTTCACTAGAAATGGG  998

seq1  ATCTCAG-CTGGCTGAGCTCCTCCGCCATCTAGTGGTCGCTGTGCTTGCA  1049
         |||| |||||||||||||||||||||||| ||||||||||||| || 
seq2  TCTTCAGCCTGGCTGAGCTCCTCCGCCATCTAATGGTCGCTGTGCTGGC-  1047

seq1  AAGGAACTACAATGTTTCTTCTCATCTCTATTTTTAGTTTAATAAAAGGG  1099
      ||||||| ||||||  ||||| || ||||  |||||| |||| |||  ||
seq2  AAGGAACCACAATG--TCTTCCCA-CTCTCATTTTAG-TTAACAAA--GG  1091

seq1  AGAAAAAAGATACAATTTGTTCCCAGTTAAGACAATTT  1137
      |||||||||||   ||||||| ||||||||||||||||
seq2  AGAAAAAAGAT--CATTTGTT-CCAGTTAAGACAATTT  1126

seq1: chr14_80044985_80045132
seq2: B6Ng01-073C14.g_75_222 (reverse)

seq1  CCCCACCCCCACCCCCACCTCGTCATTTTCCTTCTCTTGTATCTCTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCACCCCCACCTCGTCATTTTCCTTCTCTTGTATCTCTCATG  50

seq1  CTAATTACCAAGACTCAGCCTACACACATCCCAAGCTACATGAGTCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTACCAAGACTCAGCCTACACACATCCCAAGCTACATGAGTCCCAC  100

seq1  CACGCTCAGGCCAGTGGAGGGGGCTCCCAAGAGCCAGGAAGACAGGGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTCAGGCCAGTGGAGGGGGCTCCCAAGAGCCAGGAAGACAGGGA  148