BAC Information

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BAC

Clone NameB6Ng01-073H13
Chromosome14 (Build37)
Map Location 114,153,516 - 114,304,901
singlet/doubletdoublet
Overlap geneLOC382947
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073H13.bB6Ng01-073H13.g
ACCDH890594DH890595
length1,0971,046
definitionDH890594|Mus musculus domesticus DNA, BAC clone: B6Ng01-073H13, 5' end.DH890595|Mus musculus domesticus DNA, BAC clone: B6Ng01-073H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,153,516 - 114,154,579)(114,303,852 - 114,304,901)
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagctacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
caattaaaagtctcttaactgtgggctccactaaaacagtttcttccttc
aagagggaaaatatcagggcacagtcacaatcaaaagcaaaagtcaatct
ccaaccgtccaatgtctgggatccaacttacgatcttctgggctcctcca
agggcttgggtcacttctccagccatgccctttgtagcacacgcatcatc
ctctaggctccagatgcctgtactccactgctgctgctgctcttggtggt
catctcatggtactggcatctccaaaacactgcatgaccccttcagtcct
gggccatcaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaagcatagctcc
ccaacagaactcctaaataatgtataatagcttatcccatgcagaccgat
tatcacagtttgacttggtgtctgtatatgattttaatgccttccctgct
agaagcattcaatatagacataatatgcttcatcccactgagttctcaag
atgttttcattcttgaaatgcagtagattactttttaaatggtaaaacaa
aataggaaaacagaagctagtccataaattaaagatgttttgaaagaaat
gttgaatgaagcttggtatctcatatgcttactttaattcttttccccat
tctagtttagtgtttatttaaagaaacatttaaagaaaatagggaacatt
taaatacattgatcatatttttagtagatctatatctaaaactatttcat
gttttattcctgtatttagaatatataaggcatctttcattacattagct
tatttttattcacaggagtatatgtagtggtcaagatgaatcctcaaatc
tactgattaacaataagacttcccaaatttccgagaacaaaccacca
gaattcatagactcaaaagactcacaaattgttcaaaatgggataaaatg
aagaaatttgtatggagatgagattttcattttagaatattattctgggt
agggttcaaaacctgaattaaaaggacctgatgctgtcgtcaggtaaaag
ttgattggtgcaaaatagaaattgtttcccctaaaataatggctgtaata
acagtgatcagagaggatgcttgatgcaaatctagagataggatcattag
cattggtgacaagttaaaaaggagaatttacaaaaatcaaattgccacta
tcaacttttactgaaaaaaaaaacaagataaagtataaaaaattttaaat
tacaatagtattatattaacctatttcacaatttttatcctatgatgata
tgaagaagaagtgattcccagctccctaaaaaaaaagtcattatcaagct
tagcaaaaactggtgtcaaagagagagggagtggtctctggtacctaact
tgaaagggggctgaagttcatatttgaaggggtaatcttttaacaaatat
ttttttgcaatgattgtatgaagctgctcagatcttggaaagcaatggca
ggacagactgccagaagctctttcatctggacattacctggcgagtcaag
gcagttacctgcctagaacctttgagagatataacaaaaacacagcctag
gagacagtatggagcagagctcactattacaatagagagttttgagaaat
ctgctgctaactaatctcagtgcctctcctgagaaggagtgtcaactgaa
gaactttgggtggagattgtggagggtattgcttacattttacatgatca
gaactatagtttttagatttggaacaataaaaaatgcatgtcttcatgat
gtttaacatgaaaattatggaaatgagtactaatcagtaataatttgagc
ctcatctgagaggtataagagaaaacagggccttgtaaagcatgaggttt
tctggtgggagtgcatttattaatttatcaatttcatgaccttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114153516_114154579
seq2: B6Ng01-073H13.b_85_1140

seq1  GCTGGTCTGATAGAAAGATGGAATGGCCTTTTGAAGACGCAGCTACAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCTGATAGAAAGATGGAATGGCCTTTTGAAGACGCAGCTACAGCG  50

seq1  CCAATTAGGTGGTAACAGCTTGGAAGGCTGGGGCAGAGTTCTTCAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAGGTGGTAACAGCTTGGAAGGCTGGGGCAGAGTTCTTCAGAAGG  100

seq1  CAGTATATGCTTTGAATCAGCGCTCGATATATGGTACAGTTTCACCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATATGCTTTGAATCAGCGCTCGATATATGGTACAGTTTCACCCATA  150

seq1  GCCAGGATTCAATTAAAAGTCTCTTAACTGTGGGCTCCACTAAAACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGATTCAATTAAAAGTCTCTTAACTGTGGGCTCCACTAAAACAGTT  200

seq1  TCTTCCTTCAAGAGGGAAAATATCAGGGCACAGTCACAATCAAAAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCAAGAGGGAAAATATCAGGGCACAGTCACAATCAAAAGCAAA  250

seq1  AGTCAATCTCCAACCGTCCAATGTCTGGGATCCAACTTACGATCTTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATCTCCAACCGTCCAATGTCTGGGATCCAACTTACGATCTTCTGG  300

seq1  GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACA  350

seq1  CGCATCATCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCATCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCT  400

seq1  CTTGGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTGCATGACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTGCATGACCCC  450

seq1  TTCAGTCCTGGGCCATCAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCTGGGCCATCAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAG  500

seq1  CATAGCTCCCCAACAGAACTCCTAAATAATGTATAATAGCTTATCCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTCCCCAACAGAACTCCTAAATAATGTATAATAGCTTATCCCATG  550

seq1  CAGACCGATTATCACAGTTTGACTTGGTGTCTGTATATGATTTTAATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCGATTATCACAGTTTGACTTGGTGTCTGTATATGATTTTAATGCC  600

seq1  TTCCCTGCTAGAAGCATTCAATATAGACATAATATGCTTCATCCCACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCTAGAAGCATTCAATATAGACATAATATGCTTCATCCCACTGA  650

seq1  GTTCTCAAGATGTTTTCATTCTTGAAATGCAGTAGATTACTTTTTAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAGATGTTTTCATTCTTGAAATGCAGTAGATTACTTTTTAAATG  700

seq1  GTAAAACAAAATAGGAAAACAGAAGCTAGTCCATAAATTAAAGATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACAAAATAGGAAAACAGAAGCTAGTCCATAAATTAAAGATGTTTT  750

seq1  GAAAGAAATGTTGAATGAAGCTTGGTATCTCATATGCTTACTTTAATTC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAAGAAATGTTGAATGAAGCTTGGTATCTCATATGCTTACTTTAATTCT  800

seq1  TTTCCCCATTCTAGTTTAGTGTTTATTTAAAGAAAACATTTAAAGAAAAA  849
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  TTTCCCCATTCTAGTTTAGTGTTTATTTAAAG-AAACATTTAAAG-AAAA  848

seq1  TAGGGAACAATTAAATACATTGATCATA-TTTTAGTAGATCTATATCTAA  898
      ||||||||| |||||||||||||||||| ||||||||||||||||||| |
seq2  TAGGGAACATTTAAATACATTGATCATATTTTTAGTAGATCTATATCT-A  897

seq1  AAACTATTTCATGTTTTA-TCCTGTCATTTAGAATTATATAAAGCATC-T  946
      |||||||||||||||||| |||||| |||||||| ||||||| ||||| |
seq2  AAACTATTTCATGTTTTATTCCTGT-ATTTAGAA-TATATAAGGCATCTT  945

seq1  TCA-TACATTAGCTTATTTTATTTCACA-GAGTTAATATGTAGTTGGTCA  994
      ||| ||||||||||||||||  |||||| ||||  |||||||| ||||||
seq2  TCATTACATTAGCTTATTTTTATTCACAGGAGT--ATATGTAG-TGGTCA  992

seq1  AAGAATGAAT-CTCAAAATTCAAACTGATTAACAATAAGACTTCTCAAAT  1043
      |   |||||| ||||||  |   ||||||||||||||||||||| |||||
seq2  A--GATGAATCCTCAAATCT---ACTGATTAACAATAAGACTTCCCAAAT  1037

seq1  TTCCCAGAGACAAAACCACCA  1064
      ||||  ||||  |||||||||
seq2  TTCC--GAGAACAAACCACCA  1056

seq1: chr14_114303852_114304901
seq2: B6Ng01-073H13.g_70_1115 (reverse)

seq1  GTTAATGGTCATGAAATTTATAAATTTATAAATGCACTCCCACCAGAAAA  50
      ||||| |||||||||||| ||||||| |||||||||||||||||||||||
seq2  GTTAA-GGTCATGAAATTGATAAATTAATAAATGCACTCCCACCAGAAAA  49

seq1  CTTCATGCTTTCCAGGGCCTTGTTTTCTCTTATTACCTTCTCAGATGGAG  100
      | ||||||||| || |||| |||||||||||| |||| |||||||||  |
seq2  CCTCATGCTTTACAAGGCCCTGTTTTCTCTTA-TACC-TCTCAGATGAGG  97

seq1  CTCAAATTATTACTGATTAGTACTCATTTCCATAATTTTTCATGTTAAAC  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCAAATTATTACTGATTAGTACTCATTTCCATAA-TTTTCATGTTAAAC  146

seq1  ATCATGAAGACATGCATTTTTTATTGTTCCAAATCTAACAAACTATAGTT  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCATGAAGACATGCATTTTTTATTGTTCCAAATCTAA-AAACTATAGTT  195

seq1  CTGATCATGTAAAATGTAAGCAATACCCTCCACAATCTCCACCCAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATGTAAAATGTAAGCAATACCCTCCACAATCTCCACCCAAAGTT  245

seq1  CTTCAGTTGACACTCCTTCTCAGGAGAGGCACTGAGATTAGTTAGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTGACACTCCTTCTCAGGAGAGGCACTGAGATTAGTTAGCAGCA  295

seq1  GATTTCTCAAAACTCTCTATTGTAATAGTGAGCTCTGCTCCATACTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCAAAACTCTCTATTGTAATAGTGAGCTCTGCTCCATACTGTCT  345

seq1  CCTAGGCTGTGTTTTTGTTATATCTCTC-AAGGTTCTAGGCAGGTAACTG  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTAGGCTGTGTTTTTGTTATATCTCTCAAAGGTTCTAGGCAGGTAACTG  395

seq1  CCTTGACTCGCCAGGTAATGTCCAGATGAAAGAGCTTCTGGCAGTCTGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACTCGCCAGGTAATGTCCAGATGAAAGAGCTTCTGGCAGTCTGTC  445

seq1  CTGCCATTGCTTTCCAAGATCTGAGCAGCTTCATACAATCATTGCAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTGCTTTCCAAGATCTGAGCAGCTTCATACAATCATTGCAAAAA  495

seq1  AATATTTGTTAAAAGATTACCCCTTCAAATATGAACTTCAGCCCCCTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGTTAAAAGATTACCCCTTCAAATATGAACTTCAGCCCCCTTTC  545

seq1  AAGTTAGGTACCAGAGACCACTCCCTCTCTCTTTGACACCAGTTTTTGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGTACCAGAGACCACTCCCTCTCTCTTTGACACCAGTTTTTGCT  595

seq1  AAGCTTGATAATGACTTTTTTTTTAGGGAGCTGGGAATCACTTCTTCTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGATAATGACTTTTTTTTTAGGGAGCTGGGAATCACTTCTTCTTC  645

seq1  ATATCATCATAGGATAAAAATTGTGAAATAGGTTAATATAATACTATTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCATAGGATAAAAATTGTGAAATAGGTTAATATAATACTATTGT  695

seq1  AATTTAAAATTTTTTATACTTTATCTTGTTTTTTTTTTCAGTAAAAGTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATTTTTTATACTTTATCTTGTTTTTTTTTTCAGTAAAAGTTG  745

seq1  ATAGTGGCAATTTGATTTTTGTAAATTCTCCTTTTTAACTTGTCACCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGCAATTTGATTTTTGTAAATTCTCCTTTTTAACTTGTCACCAAT  795

seq1  GCTAATGATCCTATCTCTAGATTTGCATCAAGCATCCTCTCTGATCACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGATCCTATCTCTAGATTTGCATCAAGCATCCTCTCTGATCACTG  845

seq1  TTATTACAGCCATTATTTTAGGGGAAACAATTTCTATTTTGCACCAATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAGCCATTATTTTAGGGGAAACAATTTCTATTTTGCACCAATCA  895

seq1  ACTTTTACCTGACGACAGCATCAGGTCCTTTTAATTCAGGTTTTGAACCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTACCTGACGACAGCATCAGGTCCTTTTAATTCAGGTTTTGAACCC  945

seq1  TACCCAGAATAATATTCTAAAATGAAAATCTCATCTCCATACAAATTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAATAATATTCTAAAATGAAAATCTCATCTCCATACAAATTTCT  995

seq1  TCATTTTATCCCATTTTGAACAATTTGTGAGTCTTTTGAGTCTATGAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTATCCCATTTTGAACAATTTGTGAGTCTTTTGAGTCTATGAATT  1045

seq1  C  1050
      |
seq2  C  1046