BAC Information

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BAC

Clone NameB6Ng01-075E01
Chromosome14 (Build37)
Map Location 7,377,777 - 7,509,518
singlet/doubletdoublet
Overlap geneLOC100042024, LOC100041664, LOC100042077
Upstream geneLOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906
Downstream geneLOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E01.bB6Ng01-075E01.g
ACCDH891861DH891862
length1,1061,075
definitionDH891861|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E01, 5' end.DH891862|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,508,408 - 7,509,518)(7,377,777 - 7,378,852)
sequence
gaattcaccattggaaaatcactaacagcactgtgaaggtttctaaggtg
ggcagcaggaagcctgtccttttcctaccctctccctcagcccctcttcc
cccacctgtgtaggattttgaggtcgaatgtgcattgtgcactgctgctg
caaggtagctcttccctgtggctgtgctgaagcagctggccagggaagcc
tgggagctgaggctccagcctgtggattctctttcctcagactttagtct
gtaccagggagtggtgttctctcctgtgggtgtgtgtatatatattcttt
actttatattttgttcacgtagttcggtgcattcttccaggcattctgga
tgggcgctttagaatcactctttctgaaccaaaagctctcagagcagagc
tgaacctcccagaaaatgctcttctctaccaaatcgccagatgggggtgg
gcccgaagctaaacagcactgtagaggtggcataatggaccagaaccccc
aggcagaggtgggaggtaagttcctagcagtggtgctgattgagggtcag
taagacccagttcttctcctgtgcagagggaacttttacttagctggaat
tgaacctcgtggtccgagtatgtgaagggattcagggtccagagtgcacc
ccagaacataggagatagctctatgtccccatttccctcaggagccttct
cctcactcctgctgcctagaacaaggggaggagaatctccactgcctgac
ctgctgctttcatgcccctccctatctctactctccattccctctgagcc
ctccagaccctaggaggagtaagagggaggtccttcgaggcttatctcga
tttccatcctctcattccggtgctggtcatatcctgggtcagcaaccaca
gaacatcccaaggctgggtgctcaagtgtgaagtgtgcagaggaccaaga
gatataggcaggggcgacttgtgatccagagtcccgggtccaggttgctg
catgagggataaggaagatggtgctagccaggtgcatggctcagactttc
tgcagaagccagcagctgacataaagccctcggagcctgctgtgtccctg
caggga
gaattcaccattggaaaatcactaacagcactgtgaagttttctaaggtg
gacagcaggaagcctgtgcttttcctaccctctccctcagcccctcttcc
ccacctgtgtaggattttgaggtcgaatgtgcattgtgcactgctgctgc
aaggtagctcttccctgtggctgtgctgaagcagctggccagggaagcct
gggagctgaggctccagcctgtggattctctttcctcagactttagtctg
gaccagggagaggtgttctctcctgtggatgtgtgtatatatattctttg
ctttgtactttgttcacgtagttcaatgcattcttccaggcattctggat
gggcgctttagcctagacatttatttcggcatgttgtcatcttgggctgc
atgcatgtcctctcttgtttctgagtcctcaccatgcccttcccagcttc
ctgttagccaaagggaatcactctttctgaaccaaaagctctcagagcag
agctgaacctcccagaaaatgctcttctctacctaatgcgccagatgggg
gtgggcccaaagctaaacagcactgtagaggtggcctaaaggcccggaac
ccccaggcagaggtgcggaggtaaggtcctagcaatagtgctgagtgagg
gtccatgagaccgagttcttctcccgggcagagggaactttttacttagc
tggagttgtactttgtggtccgagtatgtggagggattcggggtccagag
tgcaccccagaacataggagatagctccatgtcccccttccctcaggagc
cttctcctcactcctgctgcctagaacaaggggaggaggatctccactgc
ctgacctgctgcttcatgccccttcctatctctactctatttcctctgag
ccctccagaccctaagaaggagtgagagggaggtcttcgaggcgtactcg
acatctgtcatctcattctggtgctggtcttatcctggtcagcaacacca
gaacatcccaaggcttggttgcccatgcgtgaagtgacaggatgacctag
aaagttctagcaggggaggcttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7508408_7509518
seq2: B6Ng01-075E01.b_44_1149 (reverse)

seq1  TTCCTGCAGGGACACAGCAGCGCCCCGAGGGGCTGTA-GTCAGCTGCTGG  49
      | |||||||||||||||||| || |||| ||||| || ||||||||||||
seq2  TCCCTGCAGGGACACAGCAG-GCTCCGA-GGGCTTTATGTCAGCTGCTGG  48

seq1  GCTCTGCCCGAAAGTCTGAGCCCTGCACCTGGCTAGCACCATCTTCCCTT  99
        |||| | ||||||||||||| |||||||||||||||||||||| ||||
seq2  CTTCTG-CAGAAAGTCTGAGCCATGCACCTGGCTAGCACCATCTT-CCTT  96

seq1  ATCCCCTCCATGCAGCAACCTGGACCCGGGACTCTGGATCACAAGTCGCC  149
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCC--TCATGCAGCAACCTGGACCCGGGACTCTGGATCACAAGTCGCC  144

seq1  CCTGCCTATATCTCTTTGGTCCTCTGCACACTTCACACCTGAGCACCCAG  199
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  CCTGCCTATATCTC-TTGGTCCTCTGCACACTTCACACTTGAGCACCCAG  193

seq1  CCTTGGGATGTTCTGTGGTTGCTGACCCAGGATATGACCAGCACCGGAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGATGTTCTGTGGTTGCTGACCCAGGATATGACCAGCACCGGAAT  243

seq1  GAGAGGATGGAAATCGAGATAAGCCTCGAAGGACCTCCCTCTTACTCCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATGGAAATCGAGATAAGCCTCGAAGGACCTCCCTCTTACTCCTC  293

seq1  CTAGGGTCTGGAGGGCTCAGAGGGAATGGAGAGTAGAGATAGGGAGGGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCTGGAGGGCTCAGAGGGAATGGAGAGTAGAGATAGGGAGGGGC  343

seq1  ATG-AAGCAGCAGGTCAGGCAGTGGAGATTCTCCTCCCCTTGTTCTAGGC  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCAGCAGGTCAGGCAGTGGAGATTCTCCTCCCCTTGTTCTAGGC  393

seq1  AGCAGGAGTGAGGAGAAGGCTCCTGAGGGAAATGGGGACATAGAGCTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTGAGGAGAAGGCTCCTGAGGGAAATGGGGACATAGAGCTATC  443

seq1  TCCTATGTTCTGGGGTGCACTCTGGACCCTGAATCCCTTCACATACTCGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTTCTGGGGTGCACTCTGGACCCTGAATCCCTTCACATACTCGG  493

seq1  ACCACGAGGTTCAATTCCAGCTAAGTAAAAGTTCCCTCTGCACAGGAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGAGGTTCAATTCCAGCTAAGTAAAAGTTCCCTCTGCACAGGAGAA  543

seq1  GAACTGGGTCTTACTGACCCTCAATCAGCACCACTGCTAGGAACTTACCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGTCTTACTGACCCTCAATCAGCACCACTGCTAGGAACTTACCT  593

seq1  CCCACCTCTGCCTGGGGGTTCTGGTCCATTATGCCACCTCTACAGTGCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCTGCCTGGGGGTTCTGGTCCATTATGCCACCTCTACAGTGCTG  643

seq1  TTTAGCTTCGGGCCCACCCCCATCTGGCGATTTGGTAGAGAAGAGCATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTCGGGCCCACCCCCATCTGGCGATTTGGTAGAGAAGAGCATTT  693

seq1  TCTGGGAGGTTCAGCTCTGCTCTGAGAGCTTTTGGTTCAGAAAGAGTGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGGTTCAGCTCTGCTCTGAGAGCTTTTGGTTCAGAAAGAGTGAT  743

seq1  TCTAAAGCGCCCATCCAGAATGCCTGGAAGAATGCACCGAACTACGTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGCGCCCATCCAGAATGCCTGGAAGAATGCACCGAACTACGTGAA  793

seq1  CAAAATATAAAGTAAAGAATATATATACACACACCCACAGGAGAGAACAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATAAAGTAAAGAATATATATACACACACCCACAGGAGAGAACAC  843

seq1  CACTCCCTGGTACAGACTAAAGTCTGAGGAAAGAGAATCCACAGGCTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTGGTACAGACTAAAGTCTGAGGAAAGAGAATCCACAGGCTGGA  893

seq1  GCCTCAGCTCCCAGGCTTCCCTGGCCAGCTGCTTCAGCACAGCCACAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGCTCCCAGGCTTCCCTGGCCAGCTGCTTCAGCACAGCCACAGGG  943

seq1  AAGAGCTACCTTGCAGCAGCAGTGCACAATGCACATTCGACCTCAAAATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTACCTTGCAGCAGCAGTGCACAATGCACATTCGACCTCAAAATC  993

seq1  CTACACAGGTGGGGGAAGAGGGGCTGAGGGAGAGGGTAGGAAAAGGACAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGGTGGGGGAAGAGGGGCTGAGGGAGAGGGTAGGAAAAGGACAG  1043

seq1  GCTTCCTGCTGCCCACCTTAGAAACCTTCACAGTGCTGTTAGTGATTTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGCTGCCCACCTTAGAAACCTTCACAGTGCTGTTAGTGATTTTC  1093

seq1  CAATGGTGAATTC  1111
      |||||||||||||
seq2  CAATGGTGAATTC  1106

seq1: chr14_7377777_7378852
seq2: B6Ng01-075E01.g_68_1142

seq1  GAATTCACCATTGGAAAATCACTAACAGCACTGTGAAGTTTTCTAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTGGAAAATCACTAACAGCACTGTGAAGTTTTCTAAGGTG  50

seq1  GACAGCAGGAAGCCTGTGCTTTTCCTACCCTCTCCCTCAGCCCCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGGAAGCCTGTGCTTTTCCTACCCTCTCCCTCAGCCCCTCTTCC  100

seq1  CCACCTGTGTAGGATTTTGAGGTCGAATGTGCATTGTGCACTGCTGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGTGTAGGATTTTGAGGTCGAATGTGCATTGTGCACTGCTGCTGC  150

seq1  AAGGTAGCTCTTCCCTGTGGCTGTGCTGAAGCAGCTGGCCAGGGAAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGCTCTTCCCTGTGGCTGTGCTGAAGCAGCTGGCCAGGGAAGCCT  200

seq1  GGGAGCTGAGGCTCCAGCCTGTGGATTCTCTTTCCTCAGACTTTAGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTGAGGCTCCAGCCTGTGGATTCTCTTTCCTCAGACTTTAGTCTG  250

seq1  GACCAGGGAGAGGTGTTCTCTCCTGTGGATGTGTGTATATATATTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGGAGAGGTGTTCTCTCCTGTGGATGTGTGTATATATATTCTTTG  300

seq1  CTTTGTACTTTGTTCACGTAGTTCAATGCATTCTTCCAGGCATTCTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTACTTTGTTCACGTAGTTCAATGCATTCTTCCAGGCATTCTGGAT  350

seq1  GGGCGCTTTAGCCTAGACATTTATTTCGGCATGTTGTCATCTTGGGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCTTTAGCCTAGACATTTATTTCGGCATGTTGTCATCTTGGGCTGC  400

seq1  ATGCATGTCCTCTCTTGTTTCTGAGTCCTCACCATGCCCTTCCCAGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTCCTCTCTTGTTTCTGAGTCCTCACCATGCCCTTCCCAGCTTC  450

seq1  CTGTTAGCCAAAGGGAATCACTCTTTCTGAACCAAAAGCTCTCAGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCCAAAGGGAATCACTCTTTCTGAACCAAAAGCTCTCAGAGCAG  500

seq1  AGCTGAACCTCCCAGAAAATGCTCTTCTCTACCTAATGCGCCAGATGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAACCTCCCAGAAAATGCTCTTCTCTACCTAATGCGCCAGATGGGG  550

seq1  GTGGGCCCAAAGCTAAACAGCACTGTAGAGGTGGCCTAAAGGCCCGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCCAAAGCTAAACAGCACTGTAGAGGTGGCCTAAAGGCCCGGAAC  600

seq1  CCCCAGGCAGAGGTGCGGAGGTAAGGTCCTAGCAATAGTGCTGAGTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCAGAGGTGCGGAGGTAAGGTCCTAGCAATAGTGCTGAGTGAGG  650

seq1  GTCCATGAGACCGAGTTCTTCTCCCGGGCAGAGGGAAC-TTTTACTTAGC  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCCATGAGACCGAGTTCTTCTCCCGGGCAGAGGGAACTTTTTACTTAGC  700

seq1  TGGAGTTGTACTTTGTGGTCCGAGTATGTGGAGGGATTCGGGGTCCAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTGTACTTTGTGGTCCGAGTATGTGGAGGGATTCGGGGTCCAGAG  750

seq1  TGCACCCCAGAACATAGGAGATAGCTCCATGTCCCCCTTTCCCTCAGGAG  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCACCCCAGAACATAGGAGATAGCTCCATGTCCCCC-TTCCCTCAGGAG  799

seq1  CCTTCTCCTCACTCCTGCTGCCTAGAACAAGGGGAGGAGGATCTCCACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTCACTCCTGCTGCCTAGAACAAGGGGAGGAGGATCTCCACTG  849

seq1  CCTGACCTGCTGCTTCATGCCCCTTCCTATCTCTACTCTATTTCCTCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTGCTGCTTCATGCCCCTTCCTATCTCTACTCTATTTCCTCTGA  899

seq1  GCCCTCCAGACCCT-AGGAGGAGTGAGAGGGAGGTCCTTCGAGGCGTATC  948
      |||||||||||||| || ||||||||||||||||| |||||||||||| |
seq2  GCCCTCCAGACCCTAAGAAGGAGTGAGAGGGAGGT-CTTCGAGGCGTA-C  947

seq1  TCGACATCTGTCATCTCATTCTGGTGCTGGTCATATCCTGGGTCAGCAAC  998
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  TCGACATCTGTCATCTCATTCTGGTGCTGGTCTTATCCT-GGTCAGCAAC  996

seq1  ACCAGAACATCCCAAGGC-TGGGTGCCCAGGCGTGAAGTGCACA-GAGGA  1046
      |||||||||||||||||| ||| |||||| |||||||||| ||| || ||
seq2  ACCAGAACATCCCAAGGCTTGGTTGCCCATGCGTGAAGTG-ACAGGATGA  1045

seq1  CCCA-AGAGGTCTAGGCAGGGGAGGCTTGTG  1076
      || | | || |||| ||||||||||||||||
seq2  CCTAGAAAGTTCTA-GCAGGGGAGGCTTGTG  1075