BAC Information

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BAC

Clone NameB6Ng01-076G11
Chromosome14 (Build37)
Map Location 97,090,690 - 97,091,871
singlet/doubletsinglet
Overlap genenone
Upstream gene4921530L21Rik, Klhl1, LOC100043366
Downstream geneLOC668654, EG668659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076G11.bB6Ng01-076G11.g
ACCDH892679DH892680
length1,1861,093
definitionDH892679|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G11, 5' end.DH892680|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttatgcagaattaaatgtttcccccttggaaaaatcttgagt
tgttgttattgaactaaccatatggtaccataatttgcattttcccttag
catctcagagcaatttccttttgggtctgagatggtgtgcactgcatatt
tccttctgttgcccagtgattactgaatcacatagaattgttaacaaaaa
aactttcacatcaaatatgactatttggaatatttgatgtaagaaaaaat
aaattataaggcagagtttgtttttagacagatatttgcaactctagaca
gcaccattgaagtatatttccatactactatgtggtggactttgaagaag
tagaggaagagaaatctctcgggccaatctattactaactgtgacataag
agcatttggatttttgtttataaactattctatgtatattttagactaac
atgttgcctctcacagacttagttacctattgtttaagattaatcaaatc
caacaagattgagaaaaactttgccctagcaatctagtccattccccaca
gcacagtaaatatcaaacactactcctatattgaaaatacaatagcagta
ttcatatgagataaccaaagaattatcaaggatttcttgtgctcatttgt
agtctatcatttaatataccttatatgcaaggatagtttgtagtttcctc
ctgctggatttctcctattctttgatctctacttttctaataaattataa
aacttctgctacttaatttatgactgtaggttcttaggagtctttagttc
ttgagtcctcagtgaatcacgagtcctcagtcagtcgtctaattcctgga
tctcaacaaatgtttcaacatgtttctatagctgatgacacatagttagg
gtgtagaaattgtattttgtattggtggagattcaatatgatcatgaact
ccttaaggaaagtcccttacaagtatccccagatattgcctcatttattt
taaccactggacttttatagttctactaaaacatttctaatcctcttccc
ttcttaccatgtatgtgggtaggacatttaagttgttagcaaattcaaga
aagaatggtcggatctcccaatgaatataatcatacttggagccaggtca
tgctctaataaaccttgtattatataaaggttgtca
gaattcttacagattatagatggtatagatgttgggatgggatgactcaa
aaccctggatctgggccaggaaggtagctgagttcatcagcctgccatct
ctcccacatgggcaccaccacggcaagctctccagtgttgccttggctac
tcacaccatgcagaagccgggaaagtgaagggtcatctcttctctcatgc
cctcaggctcacacgccttcaatcactgtgaatggaatacacactttttt
tttcttaaacgaatgaaatttattttaaaatataccactcattattgaca
ttttttaagtcatcaaaataaattataatagttaaatgcctcttaaatat
acatgatatcttctgaatctaaaagttatatgcactcaaccagtttttaa
aatgtatttgaacattaaacatgatagaagtagaaaaaaaattctcttat
gatgtcctctataattgtgacaagttcctaatttgacaaaaaaaaattcc
atctccaaggaagaatatgcagcataactgtggcttcatagaatgaattg
agtagtgttctttctgcttctattttgtggaatggttttaagagtattgt
tattaggtcttctttgaaagtctgataaaattctgcactaaacccatctg
ttcctgggctttttttggttagaagacttttaatgactgcttctatttct
aggtgttatgggattgtttagatgacttctctgatcctgattaactttgg
tatttaacgtctatctagataaatgttcatttcatccagatttttcagtt
ttgttgaatataggcttttgtagtaggacctggtgatattttaaaatttc
ttcagtttctgtttttataactcccttttcattttgattttattaatttc
aatactgtctctgtatcctatggttagactcgctagggtttatctatctt
gtttcatttttctcaaagactagctccggtttgctgactctttgtgtagt
ttttttggttctactgggctgattcagcccggatttgaatttccctggtg
gccactcctcatgggtatattgctccttttgtctagagctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97090690_97091871
seq2: B6Ng01-076G11.b_45_1230

seq1  GAATTCATTTATGCAGAATTAAATGTTTCCCCCTTGGAAAAATCTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGCAGAATTAAATGTTTCCCCCTTGGAAAAATCTTGAGT  50

seq1  TGTTGTTATTGAACTAACCATATGGTACCATAATTTGCATTTTCCCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTATTGAACTAACCATATGGTACCATAATTTGCATTTTCCCTTAG  100

seq1  CATCTCAGAGCAATTTCCTTTTGGGTCTGAGATGGTGTGCACTGCATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGAGCAATTTCCTTTTGGGTCTGAGATGGTGTGCACTGCATATT  150

seq1  TCCTTCTGTTGCCCAGTGATTACTGAATCACATAGAATTGTTAACAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGTTGCCCAGTGATTACTGAATCACATAGAATTGTTAACAAAAA  200

seq1  AACTTTCACATCAAATATGACTATTTGGAATATTTGATGTAAGAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCACATCAAATATGACTATTTGGAATATTTGATGTAAGAAAAAAT  250

seq1  AAATTATAAGGCAGAGTTTGTTTTTAGACAGATATTTGCAACTCTAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAGGCAGAGTTTGTTTTTAGACAGATATTTGCAACTCTAGACA  300

seq1  GCACCATTGAAGTATATTTCCATACTACTATGTGGTGGACTTTGAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTGAAGTATATTTCCATACTACTATGTGGTGGACTTTGAAGAAG  350

seq1  TAGAGGAAGAGAAATCTCTCGGGCCAATCTATTACTAACTGTGACATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAAGAGAAATCTCTCGGGCCAATCTATTACTAACTGTGACATAAG  400

seq1  AGCATTTGGATTTTTGTTTATAAACTATTCTATGTATATTTTAGACTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGGATTTTTGTTTATAAACTATTCTATGTATATTTTAGACTAAC  450

seq1  ATGTTGCCTCTCACAGACTTAGTTACCTATTGTTTAAGATTAATCAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCCTCTCACAGACTTAGTTACCTATTGTTTAAGATTAATCAAATC  500

seq1  CAACAAGATTGAGAAAAACTTTGCCCTAGCAATCTAGTCCATTCCCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGATTGAGAAAAACTTTGCCCTAGCAATCTAGTCCATTCCCCACA  550

seq1  GCACAGTAAATATCAAACACTACTCCTATATTGAAAATACAATAGCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTAAATATCAAACACTACTCCTATATTGAAAATACAATAGCAGTA  600

seq1  TTCATATGAGATAACCAAAGAATTATCAAGGATTTCTTGTGCTCATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGAGATAACCAAAGAATTATCAAGGATTTCTTGTGCTCATTTGT  650

seq1  AGTCTATCATTTAATATACCTTATATGCAAGGATAGTTTGTAGTTTCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATCATTTAATATACCTTATATGCAAGGATAGTTTGTAGTTTCCTC  700

seq1  CTGCTGGATTTCTCCTATTCTTTGATCTCTACTTTTCTAATAAATTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGATTTCTCCTATTCTTTGATCTCTACTTTTCTAATAAATTATAA  750

seq1  AACTTCTGCTACTTAATTTATGACTGTAGGTTCTTAGGAGTCTTTAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGCTACTTAATTTATGACTGTAGGTTCTTAGGAGTCTTTAGTTC  800

seq1  TTGAGTCCTCAGTGAATCACGAGTCCTCAGTCAGTCGTCTAATTCCTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCCTCAGTGAATCACGAGTCCTCAGTCAGTCGTCTAATTCCTGGA  850

seq1  TCTCAACAAATGTTTCAACATGTTTCTATAGCTGATGACACATAGTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAAATGTTTCAACATGTTTCTATAGCTGATGACACATAGTTAGG  900

seq1  GTGTAGAAATTGTATTTTGTATTGGTGGAGATTCAATATGATCATGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAAATTGTATTTTGTATTGGTGGAGATTCAATATGATCATGAACT  950

seq1  CCTT-AGGAAAGTTCACTTACAAGTATCCCCAGATAATTGCTCATTTATT  999
      |||| ||||||| || |||||||||||||||||||| |  ||||||||||
seq2  CCTTAAGGAAAG-TCCCTTACAAGTATCCCCAGATATTGCCTCATTTATT  999

seq1  TTAAACACT-GACTTTTATAGTTCTACTAAAACATTTTCTAAT-CTC-TC  1046
      |||| |||| |||||||||||||||||||||||| |||||||| ||| ||
seq2  TTAACCACTGGACTTTTATAGTTCTACTAAAACA-TTTCTAATCCTCTTC  1048

seq1  CCTTCTTACAGTGTATGT-GGTAGGACTATTAGAGTTGTTAGCAGATTCA  1095
      |||||||||  ||||||| |||||||| |||  ||||||||||| |||||
seq2  CCTTCTTACCATGTATGTGGGTAGGAC-ATTTAAGTTGTTAGCAAATTCA  1097

seq1  AGAAAGAATGCT-GTATC-CTCGATGGAAATAAATATCAATCAT-GAGCC  1142
      |||||||||| | | ||| | | ||| | |||   ||||  | | |||||
seq2  AGAAAGAATGGTCGGATCTCCCAATGAATATA---ATCATACTTGGAGCC  1144

seq1  AAGTTCATGCT-AAATAAACC-TGTATTATATAAA-GTTGTCA  1182
       || |||||||  |||||||| ||||||||||||| |||||||
seq2  -AGGTCATGCTCTAATAAACCTTGTATTATATAAAGGTTGTCA  1186