BAC Information

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BAC

Clone NameB6Ng01-076P08
Chromosome14 (Build37)
Map Location 108,857,698 - 109,026,776
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076P08.bB6Ng01-076P08.g
ACCDH893068DH893069
length1,060696
definitionDH893068|Mus musculus domesticus DNA, BAC clone: B6Ng01-076P08, 5' end.DH893069|Mus musculus domesticus DNA, BAC clone: B6Ng01-076P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,857,698 - 108,858,763)(109,026,084 - 109,026,776)
sequence
gaattcctgtttttctttggtgtggtcttttcataatgtcttaaatttct
tgtatattttatgtcagaaacgttttatatttaacattttctttgactga
tgcatctatttcttcaatagtaccctttgtccctgaaattcttacttcca
tcctttgtaatataatggagatgcttggatctgcagttcttattctcgtc
cctaggtttttatttccctaattcacacattttgttttctatattgcttg
tatttccattctcaggtcttgaacagttttactcatttccttcacttatg
tgattgcattttcctaaatttctttaagggatttacttcctctttaaagg
cctctattatctttataagattgcatttaaagccatctttcttgcaatga
aaaagaagagattcagcattatgtgtttctatgtcataccatggactctt
cagaaacctgagaacaacccatacaagaacggatcagaccttatttatct
ttacgttaaataattttgtgagcacattgtagtgtgtgtgtgtatatgtg
tatgatattttaaaatatttccatttttataaaagtattacatgtggaaa
atgtaagaaagtttaagtgtttaaaacactgggcatcaggttatttttaa
agtaaatactaatgtaaactttgtgtttacaaataaattgcaaacaatat
atggagagtttacattttaattatagagactttaaacttaataatcacaa
caacaacacaacaacaacaaaaacatcctctgaataaacactggaatctg
attcttttgcttgtatcttatttaaaactgaagcccatccccaagcctcc
agctttaatttaggacaacatgatagacgtggacatttttaaggcatatg
acagaaagcatattttccgaagtgatagacattttcagcaatcgggaagt
aaacaagcatttccagattatggtttagcactcagtcaatctttgtcgct
cctgtcaagatttcacacctgctgacaatgtcaggctcaaatttgggata
ttctgactct
gaattccagggctaggaaacaggagtgggtgggttggggagcggggcagg
gggaggggatagggtattttcggagcagaaactaagaaagaggatagcat
ttgaaatataaataaagaaaatatctaataaaaaagaaataaaatgttaa
tatttaatgacataaaatttgaaaaatatataaagattttatttaaaatt
aaaagttatttaaaattttacaaaatcaaaacataaataactatatgaac
aggaatattaataaaatgatttcaaattataaaccctcctaggtcctcag
cattcaaagtatcatttatctttctgttctcttattttatgtaacagaaa
ttcttgagttagtgtctctcagctatgtgtttattcattgccactatctt
gatagattgtgaactctatggaggaagatactgtgaaaagcaaagataaa
aacattggctatatgatgtatattaagcaaatatattttcaaatatgata
gacaacttctaaatgtaaagaaattgagttgagtttccctggtacatggt
attccatgtatttttggtcctcagttttcatccaagaattctttgaaagt
aatatgccatgaaacttttacacatattaaatctctacattggtaaattt
tttgatgaccattttctttgtagttttttctgttgcacaagggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108857698_108858763
seq2: B6Ng01-076P08.b_44_1103

seq1  GAATTCCTGTTTTTCTTTGGTGTGGTCTTTTCATAATGTCTTAAATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTTTCTTTGGTGTGGTCTTTTCATAATGTCTTAAATTTCT  50

seq1  TGTATATTTTATGTCAGAAACGTTTTATATTTAACATTTTCTTTGACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTTATGTCAGAAACGTTTTATATTTAACATTTTCTTTGACTGA  100

seq1  TGCATCTATTTCTTCAATAGTACCCTTTGTCCCTGAAATTCTTACTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATTTCTTCAATAGTACCCTTTGTCCCTGAAATTCTTACTTCCA  150

seq1  TCCTTTGTAATATAATGGAGATGCTTGGATCTGCAGTTCTTATTCTCGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTAATATAATGGAGATGCTTGGATCTGCAGTTCTTATTCTCGTC  200

seq1  CCTAGGTTTTTATTTCCCTAATTCACACATTTTGTTTTCTATATTGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTTTTTATTTCCCTAATTCACACATTTTGTTTTCTATATTGCTTG  250

seq1  TATTTCCATTCTCAGGTCTTGAACAGTTTTACTCATTTCCTTCACTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCATTCTCAGGTCTTGAACAGTTTTACTCATTTCCTTCACTTATG  300

seq1  TGATTGCATTTTCCTAAATTTCTTTAAGGGATTTACTTCCTCTTTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCATTTTCCTAAATTTCTTTAAGGGATTTACTTCCTCTTTAAAGG  350

seq1  CCTCTATTATCTTTATAAGATTGCATTTAAAGCCATCTTTCTTGCAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATTATCTTTATAAGATTGCATTTAAAGCCATCTTTCTTGCAATGA  400

seq1  AAAAGAAGAGATTCAGCATTATGTGTTTCTATGTCATACCATGGACTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGAGATTCAGCATTATGTGTTTCTATGTCATACCATGGACTCTT  450

seq1  CAGAAACCTGAGAACAACCCATACAAGAACGGATCAGACCTTATTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCTGAGAACAACCCATACAAGAACGGATCAGACCTTATTTATCT  500

seq1  TTACGTTAAATAATTTTGTGAGCACATTGTAGTGTGTGTGTGTATATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTAAATAATTTTGTGAGCACATTGTAGTGTGTGTGTGTATATGTG  550

seq1  TATGATATTTTAAAATATTTCCATTTTTATAAAAGTATTACATGTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATTTTAAAATATTTCCATTTTTATAAAAGTATTACATGTGGAAA  600

seq1  ATGTAAGAAAGTTTAAGTGTTTAAAACACTGGGCATCAGGTTATTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGAAAGTTTAAGTGTTTAAAACACTGGGCATCAGGTTATTTTTAA  650

seq1  AGTAAATACTAATGTAAACTTTGTGTTTACAAATAAATTGCAAACAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATACTAATGTAAACTTTGTGTTTACAAATAAATTGCAAACAATAT  700

seq1  ATGGAGAGTTTACATTTTAATTATAGAGACTTTAAACTTAATAATCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGTTTACATTTTAATTATAGAGACTTTAAACTTAATAATCACAA  750

seq1  CAACAACACAACAACAACAAAAACATCCTCTGAATAAACACTGGAATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACACAACAACAACAAAAACATCCTCTGAATAAACACTGGAATCTG  800

seq1  ATTCTTTTGCTTGTATCTTATTTAAAACTGAAGCCCATCCCCAAGCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTGCTTGTATCTTATTTAAAACTGAAGCCCATCCCCAAGCCTCC  850

seq1  AGCTTTAATTTAGGACAACATGATAGACGTGGACATTTTTAAGGCATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAATTTAGGACAACATGATAGACGTGGACATTTTTAAGGCATATG  900

seq1  ACAGAAAGCATATTTTCCGAAGTGATAGACATTTTCAAGCAATCGGGAAG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAGAAAGCATATTTTCCGAAGTGATAGACATTTTC-AGCAATCGGGAAG  949

seq1  TAAACAAGCATTTCCAAGATTATGGTTTAGCACTCAGTCAATCTTTGTCG  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAAACAAGCATTTCC-AGATTATGGTTTAGCACTCAGTCAATCTTTGTCG  998

seq1  CTCCTGTCAGGGTTTCACACCTGCTTGACATTGTTCAGGGCTCCAAATTT  1050
      ||||||||| | |||||||||||| ||||| || ||| |||| |||||||
seq2  CTCCTGTCAAGATTTCACACCTGC-TGACAATG-TCA-GGCT-CAAATTT  1044

seq1  GGGATTATCTGACTCT  1066
      |||||  |||||||||
seq2  GGGATATTCTGACTCT  1060

seq1: chr14_109026084_109026776
seq2: B6Ng01-076P08.g_68_763 (reverse)

seq1  TAGCCCTTGTGCAACAG-AAAAACTACAAAG-AAATGGTCATC-AAAAAT  47
      ||||||||||||||||| ||||||||||||| ||||||||||| ||||||
seq2  TAGCCCTTGTGCAACAGAAAAAACTACAAAGAAAATGGTCATCAAAAAAT  50

seq1  TTACCAATGTAGAGATTTAATATGTGTAAAAGTTTCATGGCATATTACTT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAATGTAGAGATTTAATATGTGTAAAAGTTTCATGGCATATTACTT  100

seq1  TCAAAGAATTCTTGGATGAAAACTGAGGACCAAAAATACATGGAATACCA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAATTCTTGGATGAAAACTGAGGACCAAAAATACATGGAATACCA  150

seq1  TGTACCAGGGAAACTCAACTCAATTTCTTTACATTTAGAAGTTGTCTATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGGGAAACTCAACTCAATTTCTTTACATTTAGAAGTTGTCTATC  200

seq1  ATATTTGAAAATATATTTGCTTAATATACATCATATAGCCAATGTTTTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAAAATATATTTGCTTAATATACATCATATAGCCAATGTTTTTA  250

seq1  TCTTTGCTTTTCACAGTATCTTCCTCCATAGAGTTCACAATCTATCAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTTTCACAGTATCTTCCTCCATAGAGTTCACAATCTATCAAGA  300

seq1  TAGTGGCAATGAATAAACACATAGCTGAGAGACACTAACTCAAGAATTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCAATGAATAAACACATAGCTGAGAGACACTAACTCAAGAATTTC  350

seq1  TGTTACATAAAATAAGAGAACAGAAAGATAAATGATACTTTGAATGCTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATAAAATAAGAGAACAGAAAGATAAATGATACTTTGAATGCTGA  400

seq1  GGACCTAGGAGGGTTTATAATTTGAAATCATTTTATTAATATTCCTGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAGGAGGGTTTATAATTTGAAATCATTTTATTAATATTCCTGTTC  450

seq1  ATATAGTTATTTATGTTTTGATTTTGTAAAATTTTAAATAACTTTTAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTATTTATGTTTTGATTTTGTAAAATTTTAAATAACTTTTAATT  500

seq1  TTAAATAAAATCTTTATATATTTTTCAAATTTTATGTCATTAAATATTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAAATCTTTATATATTTTTCAAATTTTATGTCATTAAATATTAA  550

seq1  CATTTTATTTCTTTTTTATTAGATATTTTCTTTATTTATATTTCAAATGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTTCTTTTTTATTAGATATTTTCTTTATTTATATTTCAAATGC  600

seq1  TATCCTCTTTCTTAGTTTCTGCTCCGAAAATACCCTATCCCCTCCCCCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTTTCTTAGTTTCTGCTCCGAAAATACCCTATCCCCTCCCCCTG  650

seq1  CCCCGCTCCCCAACCCACCCACTCCTGTTTCCTAGCCCTGGAATTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCTCCCCAACCCACCCACTCCTGTTTCCTAGCCCTGGAATTC  696