BAC Information

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BAC

Clone NameB6Ng01-077L01
Chromosome14 (Build37)
Map Location 26,506,958 - 26,638,134
singlet/doubletdoublet
Overlap genePpif, 2310047A01Rik
Upstream geneLOC669315, LOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik
Downstream geneAnxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077L01.bB6Ng01-077L01.g
ACCDH893598DH893599
length1,134750
definitionDH893598|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L01, 5' end.DH893599|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,506,958 - 26,508,097)(26,637,386 - 26,638,134)
sequence
gaattctgtggcgggcagagctcaggcacgttctgaccaagcagcccttg
cagaggcccaagcctcacacctaggcaagcaggggttggcacccttgctt
tgggatatcggagcactgaaaacattgctataaagcataaaaagtaaatt
aaggtggagttgttacctgcaaagagtaattctgggctggctctctctgt
tgactctgggtgtgaacggcacgtacgagtgtgttcagggcggcaggctt
atgggctgctcaggtgttggaggcctgaggactggcagctgaggactggc
agctgaggactggcagcacagtcctctaggacaggaaggcctggccatgg
gaggagagtgcaggctgtgcactgcattggcctgagttcaagtctaaccc
aacctcctggaacccttccttacagagttattaagactagttggaccagg
tgtggtacacagctttaacaccagcactcaggaggcagagacaagtgtgc
ctatgtgtgtttaaggccaatctggtctacatagtaagttccagagctac
tcagagagaccctgccccgttcacctccccccacccccatctatgtaatt
aagcagtgccaggctaactgaagcaatggcatctgacacaatctatctca
gaggtgtccattctacatggacccactggttcctccagaaagccacgcag
tgaagataaggtgggaagacctgcattttctacttcatcctagtgagacc
ttggatgaatagctagccctctctgggcctccattctttcacttgtaaga
cagggacagtactctccagggctgttctgagactagaggtaacatcttgg
agcaaggcccagcatggtgtcaacaagcaaggtactaccccaaaccgctc
agcttggcctccttaagcttcctccatcgctcccgtctctctcccttctc
ccagtccctactcatttcctggagcaaacaagcaaattggcttcatgctt
tcccagagatagcaagtcttgtcttgttgagctccttctgttgtccttgt
tggtcctcttttcaagagcagctgtgcacaaatctgctggattgccgttc
agttaactgtttaggttgaacattggaccctcta
gaattccagccagtctacagtggcagcaaacctgtcatttacaccactgt
gcttttttattttccacatcagagctatttggaagggggaggggagttct
cttccaggaacccttctctgaccccacagtttctttctcaccctgaccca
gcaaagggtgaatcctgttcctatggagtcctgatacccttttctttctt
tccttttttctttctttttgggtttttgagacagggtttctctgtatagc
cttggctgtcctggaattcactttgtagaccaggctggcctcaaactcag
aaatctgcctgccgcactgcccagcaaaagttttatttatctattattta
tatgagtacactgtagctgtcctcagacacaacagaagaggacagcagat
tctattacagatggttgtgagccatcatgtggttgctgggaattgaactc
aggaccactaactactcagtcagtgcttttaaccactgagccatctctcc
agcccccctcccacccacccccactcccacccacccccactcccataccc
ttttctaggcagttcccgattattctaactgttgcagtttgtatttttct
ttagcctttaggtctgcttgatacatatatgtggtggtttgaatgagact
ggccccaatagggtcacatattggaatgtttggttccttgttggtagact
gtttagaaaggattgggagctgttggaaaatgggtttactgggggggggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26506958_26508097
seq2: B6Ng01-077L01.b_46_1179

seq1  GAATTCTGTGGCGGGCAGAGCTCAGGCACGTTCTGACCAAGCAGCCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCGGGCAGAGCTCAGGCACGTTCTGACCAAGCAGCCCTTG  50

seq1  CAGAGGCCCAAGCCTCACACCTAGGCAAGCAGGGGTTGGCACCCTTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCCCAAGCCTCACACCTAGGCAAGCAGGGGTTGGCACCCTTGCTT  100

seq1  TGGGATATCGGAGCACTGAAAACATTGCTATAAAGCATAAAAAGTAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATATCGGAGCACTGAAAACATTGCTATAAAGCATAAAAAGTAAATT  150

seq1  AAGGTGGAGTTGTTACCTGCAAAGAGTAATTCTGGGCTGGCTCTCTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGAGTTGTTACCTGCAAAGAGTAATTCTGGGCTGGCTCTCTCTGT  200

seq1  TGACTCTGGGTGTGAACGGCACGTACGAGTGTGTTCAGGGCGGCAGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGGGTGTGAACGGCACGTACGAGTGTGTTCAGGGCGGCAGGCTT  250

seq1  ATGGGCTGCTCAGGTGTTGGAGGCCTGAGGACTGGCAGCTGAGGACTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGCTCAGGTGTTGGAGGCCTGAGGACTGGCAGCTGAGGACTGGC  300

seq1  AGCTGAGGACTGGCAGCACAGTCCTCTAGGACAGGAAGGCCTGGCCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGACTGGCAGCACAGTCCTCTAGGACAGGAAGGCCTGGCCATGG  350

seq1  GAGGAGAGTGCAGGCTGTGCACTGCATTGGCCTGAGTTCAAGTCTAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGTGCAGGCTGTGCACTGCATTGGCCTGAGTTCAAGTCTAACCC  400

seq1  AACCTCCTGGAACCCTTCCTTACAGAGTTATTAAGACTAGTTGGACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCTGGAACCCTTCCTTACAGAGTTATTAAGACTAGTTGGACCAGG  450

seq1  TGTGGTACACAGCTTTAACACCAGCACTCAGGAGGCAGAGACAAGTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTACACAGCTTTAACACCAGCACTCAGGAGGCAGAGACAAGTGTGC  500

seq1  CTATGTGTGTTTAAGGCCAATCTGGTCTACATAGTAAGTTCCAGAGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGTGTTTAAGGCCAATCTGGTCTACATAGTAAGTTCCAGAGCTAC  550

seq1  TCAGAGAGACCCTGCCCCGTTCACCTCCCCCCACCCCCATCTATGTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGACCCTGCCCCGTTCACCTCCCCCCACCCCCATCTATGTAATT  600

seq1  AAGCAGTGCCAGGCTAACTGAAGCAATGGCATCTGACACAATCTATCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGCCAGGCTAACTGAAGCAATGGCATCTGACACAATCTATCTCA  650

seq1  GAGGTGTCCATTCTACATGGACCCACTGGTTCCTCCAGAAAGCCACGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCCATTCTACATGGACCCACTGGTTCCTCCAGAAAGCCACGCAG  700

seq1  TGAAGATAAGGTGGGAAGACCTGCATTTTCTACTTCATCCTAGTGAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATAAGGTGGGAAGACCTGCATTTTCTACTTCATCCTAGTGAGACC  750

seq1  TTGGATGAATAGCTAGCCCTCTCTGGGCCTCCATTCTTTCACTTGTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGAATAGCTAGCCCTCTCTGGGCCTCCATTCTTTCACTTGTAAGA  800

seq1  CAGGGACAGTACTCTCCAGGGCTGTTCTGAGACTAGAGGTAACATCTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAGTACTCTCCAGGGCTGTTCTGAGACTAGAGGTAACATCTTGG  850

seq1  AGCAAGGCCCAGCATGGTGTCAACAAGCAAGGTACTACCCCAAACCGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCCCAGCATGGTGTCAACAAGCAAGGTACTACCCCAAACCGCTC  900

seq1  AGCTTGGCCTCCTTAAGGCTTCCTCCATCGCTCCCCGTCTCTCTCCCCTT  950
      |||||||||||||||| ||||||||||||||| ||||||||||| |||||
seq2  AGCTTGGCCTCCTTAA-GCTTCCTCCATCGCT-CCCGTCTCTCT-CCCTT  947

seq1  CTCCCAGTCCCTACTCATTTCCTGGAGCAAAACAAGGCAAATTGGCTTCA  1000
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CTCCCAGTCCCTACTCATTTCCTGGAGC-AAACAA-GCAAATTGGCTTCA  995

seq1  TGCTTTCCCAGAGATAAGCAAGTCTTGTCTTGTTGAGCTCCTTCTG-TGT  1049
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  TGCTTTCCCAGAGAT-AGCAAGTCTTGTCTTGTTGAGCTCCTTCTGTTGT  1044

seq1  CCCTG-TGGT-CTC-TGTCAAGAGCAGCTGGTGGCACAAATCTGCTGAGA  1096
      || || |||| ||| | |||||||||||||   |||||||||||||| ||
seq2  CCTTGTTGGTCCTCTTTTCAAGAGCAGCTG--TGCACAAATCTGCTG-GA  1091

seq1  TGGCCGTTCAG-TAACTGTTAGGTGTGGAACAATGGGACCCTCTA  1140
      | ||||||||| ||||||||  | || |||| || ||||||||||
seq2  TTGCCGTTCAGTTAACTGTTTAG-GTTGAAC-ATTGGACCCTCTA  1134

seq1: chr14_26637386_26638134
seq2: B6Ng01-077L01.g_67_816 (reverse)

seq1  CCACCCCCCCAGTAAACCCATTTTCCAACAGCTCCCAATCCTTTCTAAAC  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCAGTAAACCCATTTTCCAACAGCTCCCAATCCTTTCTAAAC  50

seq1  AGTCTACCAACAAGGAACCAAACATTCCAATATGTGACCCTATTGGGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACCAACAAGGAACCAAACATTCCAATATGTGACCCTATTGGGGCC  100

seq1  AGTCTCATTCAAACCACCACATATATGTATCAAGCAGACCTAAAGGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATTCAAACCACCACATATATGTATCAAGCAGACCTAAAGGCTAA  150

seq1  AG-AAAATACAAACTGCAACAGTTAGAATAATCGGGAACTGCCTAGAAAA  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATACAAACTGCAACAGTTAGAATAATCGGGAACTGCCTAGAAAA  200

seq1  GGGTATGGGAGTGGGGGTGGGTGGGAGTGGGGGTGGGTGGGAGGGGGGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGGAGTGGGGGTGGGTGGGAGTGGGGGTGGGTGGGAGGGGGGCT  250

seq1  GGAGAGATGGCTCAGTGGTTAAAAGCACTGACTGAGTAGTTAGTGGTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGGCTCAGTGGTTAAAAGCACTGACTGAGTAGTTAGTGGTCCT  300

seq1  GAGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTGTAATAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTGTAATAGA  350

seq1  ATCTGCTGTCCTCTTCTGTTGTGTCTGAGGACAGCTACAGTGTACTCATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGTCCTCTTCTGTTGTGTCTGAGGACAGCTACAGTGTACTCATA  400

seq1  TAAATAATAGATAAATAAAACTTTTGCTGGGCAGTGCGGCAGGCAGATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATAGATAAATAAAACTTTTGCTGGGCAGTGCGGCAGGCAGATTT  450

seq1  CTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAATTCCAGGACAGCCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAATTCCAGGACAGCCAAG  500

seq1  GCTATACAGAGAAACCCTGTCTCAAAAACCCAAAAAGAAAGAAAAAAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACAGAGAAACCCTGTCTCAAAAACCCAAAAAGAAAGAAAAAAGGA  550

seq1  AAGAAAGAAAAGGGTATCAGGACTCCATAGGAACAGGATTCACCCTTTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAGGGTATCAGGACTCCATAGGAACAGGATTCACCCTTTGC  600

seq1  TGGGTCAGGGTGAGAAAGAAACTGTGGGGTCAGAGAAGGGTTCCTGGAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCAGGGTGAGAAAGAAACTGTGGGGTCAGAGAAGGGTTCCTGGAAG  650

seq1  AGAACTCCCCTCCCCCTTCCAAATAGCTCTGATGTGGAAAATAAAAAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCCCTCCCCCTTCCAAATAGCTCTGATGTGGAAAATAAAAAAGC  700

seq1  ACAGTGGTGTAAATGACAGGTTTGCTGCCACTGTAGACTGGCTGGAATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTGTAAATGACAGGTTTGCTGCCACTGTAGACTGGCTGGAATTC  750