BAC Information

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BAC

Clone NameB6Ng01-077L07
Chromosome14 (Build37)
Map Location 114,320,940 - 114,321,919
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510, LOC382947
Downstream geneLOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077L07.bB6Ng01-077L07.g
ACCDH893610DH893611
length1,227977
definitionDH893610|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L07, 5' end.DH893611|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgctctagctaaccttctcatgaataatgcaatactctaaaacc
acagaccaatctacttcctaaaccattgtaaattcctgtatatgggagca
atttggcttttgttctaagtgatagtgtgggggaactttgtactaataag
taatgtagtctgccatatataactataataagaattctaaacttacattg
ctaagcttgccctgagatttctaactctatgtggtagatagtaatgcctg
atttctttcactatctctctttcagtactaaaggcaattctgattgtcac
tgaataggcaacattcttactgaattccaagcccagggtcagctcaagga
ctacctagggcattggataaggccaggaagcaaagttcgattttgcttag
gtatgtggcaagtcattgtttgaaggcacctataacaaaacaagactgaa
aggaagcacacagatccatttgcaaggacaaaattggagcacacatgcta
tggaatgccacagtttcaggagactaagttttcatgaaactctttacctc
aggactgcatccaggcttttggcctgccatgcatgtcactactggagtgg
atgtagcaataggggacaaatatccaaaatgtataaagaccacaagaata
tggactccagaaaaatcaaataaccatatttaaaatggggtatggagcta
aacaaagaattctcaactgaggaatacctcagaatggctgagaagcacct
gaaaaaaatgttcaatattcttaatcatcagggaaatacaaatcaaacaa
ccctgagattccacctcacaccagtcagaatggctaagaacaaaaattca
cgtgacagcagatgctggtgaggatatggagaaagagggagattcctcta
ttgttagtgggattgcaagctggtacaccactctggaagtcagtctggag
gttcctcagaaattgtaaatagtactactagagatctagcattcctctct
gggcctataccaggagatgtccaatttgtatagacacatgcttcatatgt
catagcagcttatttatatagccagagctgaagaacccgaatgtccctcc
aacgagatggataagaaaatgtagttacccatgagtttactcaagcatta
acatgaattgattctagcatgatgcctgaaatactctgcatggtactatc
tagaaccatggtaatctacggtaggtg
gaattccaagaacacatagatgaatcataatctaactttccaggctagtg
aattggcttatctggtggagagagctgtcctactccagatgatctgagtt
gtgacattggagtctcacatagttaaagatcctgatagttgatctctgac
ttccatactcatgtcatggtatatgtccttcctctattcacacatgtagt
atgtttttctttaacaaaactaacttctaatatcattaagatctcataaa
ctaaaagtaattggttgcacatccttttctaaacaattttagaagactac
aaagcaatagatgatgggtttggttccctgtggcagagtgtggaagcttc
agcagggttcatgcctgcaaaggcaaagaaaggaaactgcttccagacat
gaaagacctttacttcactgtcatcaaggcatttttgtttgtttgtttgt
ttgttcattttggtagctgctaaaagaaactctttctgtgcattgaaata
caatttgttacttgagcttcctgttgctagtcagtgcatctcatgcatta
gatgcaaagtaagctgattttggggacaactacaaaaggggccttctctg
gaaactaggcagaattttgtatgaatctttgacaactctgatctttttac
ctctatttatatttaccctgtttttctggtttctcttaagtggctagaaa
gagttcagctatcaaaccacaagcacaaaatgggcatttcttgttcttag
agaactcctttctaaatatttttcctttcattgtttcatttctttgttaa
ttgttttgtttgtttgtttgagacctaaatttactatgcaggtgaagcta
tacttgtattatatatgtataaaacacacggtatctctaattcacaattt
cctggtctcattttaaaatactacggttacaggactctatatccagtagt
agtagtagtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114320940_114321919
seq2: B6Ng01-077L07.g_67_1043

seq1  GAATTCCAAGAACACATAGATGAATCATAATCTAACTTTCCAGGCTAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAACACATAGATGAATCATAATCTAACTTTCCAGGCTAGTG  50

seq1  AATTGGCTTATCTGGTGGAGAGAGCTGTCCTACTCCAGATGATCTGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCTTATCTGGTGGAGAGAGCTGTCCTACTCCAGATGATCTGAGTT  100

seq1  GTGACATTGGAGTCTCACATAGTTAAAGATCCTGATAGTTGATCTCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTGGAGTCTCACATAGTTAAAGATCCTGATAGTTGATCTCTGAC  150

seq1  TTCCATACTCATGTCATGGTATATGTCCTTCCTCTATTCACACATGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACTCATGTCATGGTATATGTCCTTCCTCTATTCACACATGTAGT  200

seq1  ATGTTTTTCTTTAACAAAACTAACTTCTAATATCATTAAGATCTCATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTCTTTAACAAAACTAACTTCTAATATCATTAAGATCTCATAAA  250

seq1  CTAAAAGTAATTGGTTGCACATCCTTTTCTAAACAATTTTAGAAGACTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGTAATTGGTTGCACATCCTTTTCTAAACAATTTTAGAAGACTAC  300

seq1  AAAGCAATAGATGATGGGTTTGGTTCCCTGTGGCAGAGTGTGGAAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATAGATGATGGGTTTGGTTCCCTGTGGCAGAGTGTGGAAGCTTC  350

seq1  AGCAGGGTTCATGCCTGCAAAGGCAAAGAAAGGAAACTGCTTCCAGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGTTCATGCCTGCAAAGGCAAAGAAAGGAAACTGCTTCCAGACAT  400

seq1  GAAAGACCTTTACTTCACTGTCATCAAGGCATTTTTGTTTGTTTGTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACCTTTACTTCACTGTCATCAAGGCATTTTTGTTTGTTTGTTTGT  450

seq1  TTGTTCATTTTGGTAGCTGCTAAAAGAAACTCTTTCTGTGCATTGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATTTTGGTAGCTGCTAAAAGAAACTCTTTCTGTGCATTGAAATA  500

seq1  CAATTTGTTACTTGAGCTTCCTGTTGCTAGTCAGTGCATCTCATGCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTTACTTGAGCTTCCTGTTGCTAGTCAGTGCATCTCATGCATTA  550

seq1  GATGCAAAGTAAGCTGATTTTGGGGACAACTACAAAAGGGGCCTTCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAAGTAAGCTGATTTTGGGGACAACTACAAAAGGGGCCTTCTCTG  600

seq1  GAAACTAGGCAGAATTTTGTATGAATCTTTGACAACTCTGATCTTTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGGCAGAATTTTGTATGAATCTTTGACAACTCTGATCTTTTTAC  650

seq1  CTCTATTTATATTTACCCTGTTTTTCTGGTTTCTCTTAAGTGGCTAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTATATTTACCCTGTTTTTCTGGTTTCTCTTAAGTGGCTAGAAA  700

seq1  GAGTTCAGCTATCAAACCACAAGCACAAAATGGGCATTTCTTGTTCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGCTATCAAACCACAAGCACAAAATGGGCATTTCTTGTTCTTAG  750

seq1  AGAACTCCTTTCTAAATATTTTTCCTTTCATTGTTTCATTTCTTTGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCTTTCTAAATATTTTTCCTTTCATTGTTTCATTTCTTTGTTAA  800

seq1  TTGTTTTGTTTGTTTGTTTGAGACCTAAATTTACTATGCAGGTGAAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTGTTTGTTTGAGACCTAAATTTACTATGCAGGTGAAGCTA  850

seq1  TACTTGTATTATATATGTATAAAACACAGGGTTATCTCTAATTCACAATT  900
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  TACTTGTATTATATATGTATAAAACACACGG-TATCTCTAATTCACAATT  899

seq1  TCCTGGCCTCCATTTTAAAATACTAGGGTTACAGGACCTCTATATCCAGT  950
      |||||| || ||||||||||||||| |||||||||| |||||||||||||
seq2  TCCTGGTCT-CATTTTAAAATACTACGGTTACAGGA-CTCTATATCCAGT  947

seq1  AGTAGTAGTAGTGTGTGTGTGTGTGTGTGT  980
      ||||||||||||||||||||||||||||||
seq2  AGTAGTAGTAGTGTGTGTGTGTGTGTGTGT  977