BAC Information

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BAC

Clone NameB6Ng01-078G16
Chromosome14 (Build37)
Map Location 107,577,705 - 107,708,636
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneLOC668752, EG668754, LOC668757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G16.bB6Ng01-078G16.g
ACCDH894120DH894121
length1,150605
definitionDH894120|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G16, 5' end.DH894121|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,707,474 - 107,708,636)(107,577,705 - 107,578,309)
sequence
gaattccattcttgaaagtctgtgttctggtaaagtttatagtatatgta
ggttgctaagactaaattcataatttaatatgtttcagggccaagaagtg
acaaatggcattgtgagtgattaaagaaacataacaatctatacaagtta
aaataactaatgcagaagattataatttaaattggtgaggtcagaagctc
ttgttctatatataatttttgtcatgggttactaagaacaggtggtagtt
taaaaacttatgttcagtacttcctcacttaatatttacttttttttgtc
ttatagtaaacaacactgtattacacacttaaattcctagaagtcaagtt
tcatcttagtcgaaaagagaaacaacaataaaatatctttcttaattttc
acgtctgagtttcaggaatgtttaacagacattttaattttcatttcact
tttaaccaaataaatatgacacaggcataattttgttatgtgacaagggc
taattttcaactgtattatccaagaaatagcaaaaataatgttaatcatt
agcgaggaaaatattttcaatgtttaaatgtaaaagtaaaaagcctttga
tgataataatttaaacaaaaaagaaagcatttatggattcagtactataa
ttttattctcaaaactatcatattcttgtcattattttacttttgaattt
gaaataaattgagtgttttgggttttatctgactttggagagtagcctgc
ataaatacgtttgctttcaaatacagcaaagagtgttgtgacagtaaaag
acaacaattcgtggatccttgaggtagaattctatgatgattcttgtacc
aaagtaaaacaataacacttcttgtcaaaaggcagaaatgtacatttaga
attgtggaaaacttaaactctttgggaaatagtttagttaaatgctggca
tgttttcagtttctcatctcatgagaaaatgtattgcaatatattcatac
atagtactatgtatcaaatagtaatataacatatttaattttgtaaatgc
atacccagtgaaaaataatacagcatattctaactgtaatacaagaaaat
gacctctgtagtaagtttaaataacatgtgaaagcgaacatgtctataaa

gaattctcctatttcttgttttatcctattgatatttcatttaattgttt
acattttatttatttatttatttatctatttattcatttatttatttatt
ttgttttgtgtgggtttttttgttttttgttttgttttgttttgttttgt
ttttttgagacagggtttctctgtgcagccctagctgtcctggaaatcac
tctgtagactaggctggcctcaaactcagaaattcgcctacctctgcctc
ccaagtgctgggattaaaggtgttcgccatcacacccagcttcatttaat
tttattaaatattatgaaataaacagattttttattgaaattatttttct
ggtttcctatttttattttattaaatttatattttttattattattatta
cttatatccgtgtgttcgctttatgcattatgcgttgtgggagaatcagg
agtctcaggatgtagcttaccaaatggcatcagaagaagagcagacaggc
aggcactggaattagtctctgatgtaatccaacatattcactgggtccct
ttaaatgtcctataacatctcagtacagaaagtggagaaagagaagcatt
ggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107707474_107708636
seq2: B6Ng01-078G16.b_42_1191 (reverse)

seq1  TTTATAGACATGTTCTGCTTTTCACAATGTTATCTAAACCTTACTTACAG  50
      ||||||||||||||| || |||||| ||||||| |||| ||||| |||||
seq2  TTTATAGACATGTTC-GC-TTTCAC-ATGTTATTTAAA-CTTAC-TACAG  45

seq1  AGGTCATATTCTTGTATTAACAGTTAGAATATGCTGTATTATTTTTCACT  100
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  AGGTCATTTTCTTGTATT-ACAGTTAGAATATGCTGTATTATTTTTCACT  94

seq1  GGGTAATGCATTTACAAAATTAAATATGTTATTATTACTATTTGAATTAC  150
      |||| |||||||||||||||||||||||||| |||||||||||||  |||
seq2  GGGT-ATGCATTTACAAAATTAAATATGTTA-TATTACTATTTGA--TAC  140

seq1  ATAGTAACTATGTATGAATATATTGCAATACAATTTTCTTCATGAGATGA  200
      ||||| ||||||||||||||||||||||||| |||||| |||||||||||
seq2  ATAGT-ACTATGTATGAATATATTGCAATAC-ATTTTC-TCATGAGATGA  187

seq1  GAAACTGAAAACATGCCAGCATATTAACTAAACTATTT-CCAAAGAGTTT  249
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  GAAACTGAAAACATGCCAGCAT-TTAACTAAACTATTTCCCAAAGAGTTT  236

seq1  AAGTTTTCCACAATTCTAAATGTACATTTCTGCCTTTTGACAAGAAGTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCCACAATTCTAAATGTACATTTCTGCCTTTTGACAAGAAGTGT  286

seq1  TATTGTTTTACTTTGGTACAAGAATCATCATAGAATTCTACCTCAAGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTACTTTGGTACAAGAATCATCATAGAATTCTACCTCAAGGAT  336

seq1  CCACGAATTGTTGTCTTTTACTGTCACAACACTCTTTGCTGTATTTGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGAATTGTTGTCTTTTACTGTCACAACACTCTTTGCTGTATTTGAAA  386

seq1  GCAAACGTATTTATGCAGGCTACTCTCCAAAGTCAGATAAAACCCAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACGTATTTATGCAGGCTACTCTCCAAAGTCAGATAAAACCCAAAAC  436

seq1  ACTCAATTTATTTCAAATTCAAAAGTAAAATAATGACAAGAATATGATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATTTATTTCAAATTCAAAAGTAAAATAATGACAAGAATATGATAG  486

seq1  TTTTGAGAATAAAATTATAGTACTGAATCCATAAATGCTTTCTTTTTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGAATAAAATTATAGTACTGAATCCATAAATGCTTTCTTTTTTGT  536

seq1  TTAAATTATTATCATCAAAGGCTTTTTACTTTTACATTTAAACATTGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATTATCATCAAAGGCTTTTTACTTTTACATTTAAACATTGAAA  586

seq1  ATATTTTCCTCGCTAATGATTAACATTATTTTTGCTATTTCTTGGATAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCTCGCTAATGATTAACATTATTTTTGCTATTTCTTGGATAAT  636

seq1  ACAGTTGAAAATTAGCCCTTGTCACATAACAAAATTATGCCTGTGTCATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGAAAATTAGCCCTTGTCACATAACAAAATTATGCCTGTGTCATA  686

seq1  TTTATTTGGTTAAAAGTGAAATGAAAATTAAAATGTCTGTTAAACATTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGGTTAAAAGTGAAATGAAAATTAAAATGTCTGTTAAACATTCC  736

seq1  TGAAACTCAGACGTGAAAATTAAGAAAGATATTTTATTGTTGTTTCTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCAGACGTGAAAATTAAGAAAGATATTTTATTGTTGTTTCTCTT  786

seq1  TTCGACTAAGATGAAACTTGACTTCTAGGAATTTAAGTGTGTAATACAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACTAAGATGAAACTTGACTTCTAGGAATTTAAGTGTGTAATACAGT  836

seq1  GTTGTTTACTATAAGACAAAAAAAAGTAAATATTAAGTGAGGAAGTACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTACTATAAGACAAAAAAAAGTAAATATTAAGTGAGGAAGTACTG  886

seq1  AACATAAGTTTTTAAACTACCACCTGTTCTTAGTAACCCATGACAAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGTTTTTAAACTACCACCTGTTCTTAGTAACCCATGACAAAAAT  936

seq1  TATATATAGAACAAGAGCTTCTGACCTCACCAATTTAAATTATAATCTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAGAACAAGAGCTTCTGACCTCACCAATTTAAATTATAATCTTC  986

seq1  TGCATTAGTTATTTTAACTTGTATAGATTGTTATGTTTCTTTAATCACTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGTTATTTTAACTTGTATAGATTGTTATGTTTCTTTAATCACTC  1036

seq1  ACAATGCCATTTGTCACTTCTTGGCCCTGAAACATATTAAATTATGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCCATTTGTCACTTCTTGGCCCTGAAACATATTAAATTATGAATT  1086

seq1  TAGTCTTAGCAACCTACATATACTATAAACTTTACCAGAACACAGACTTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTAGCAACCTACATATACTATAAACTTTACCAGAACACAGACTTT  1136

seq1  CAAGAATGGAATTC  1163
      ||||||||||||||
seq2  CAAGAATGGAATTC  1150

seq1: chr14_107577705_107578309
seq2: B6Ng01-078G16.g_70_674

seq1  GAATTCTCCTATTTCTTGTTTTATCCTATTGATATTTCATTTAATTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATTTCTTGTTTTATCCTATTGATATTTCATTTAATTGTTT  50

seq1  ACATTTTATTTATTTATTTATTTATCTATTTATTCATTTATTTATTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTTATTTATTTATTTATCTATTTATTCATTTATTTATTTATT  100

seq1  TTGTTTTGTGTGGGTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTGTGGGTTTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTGT  150

seq1  TTTTTTGAGACAGGGTTTCTCTGTGCAGCCCTAGCTGTCCTGGAAATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGACAGGGTTTCTCTGTGCAGCCCTAGCTGTCCTGGAAATCAC  200

seq1  TCTGTAGACTAGGCTGGCCTCAAACTCAGAAATTCGCCTACCTCTGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACTAGGCTGGCCTCAAACTCAGAAATTCGCCTACCTCTGCCTC  250

seq1  CCAAGTGCTGGGATTAAAGGTGTTCGCCATCACACCCAGCTTCATTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGGGATTAAAGGTGTTCGCCATCACACCCAGCTTCATTTAAT  300

seq1  TTTATTAAATATTATGAAATAAACAGATTTTTTATTGAAATTATTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAATATTATGAAATAAACAGATTTTTTATTGAAATTATTTTTCT  350

seq1  GGTTTCCTATTTTTATTTTATTAAATTTATATTTTTTATTATTATTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCTATTTTTATTTTATTAAATTTATATTTTTTATTATTATTATTA  400

seq1  CTTATATCCGTGTGTTCGCTTTATGCATTATGCGTTGTGGGAGAATCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCCGTGTGTTCGCTTTATGCATTATGCGTTGTGGGAGAATCAGG  450

seq1  AGTCTCAGGATGTAGCTTACCAAATGGCATCAGAAGAAGAGCAGACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGATGTAGCTTACCAAATGGCATCAGAAGAAGAGCAGACAGGC  500

seq1  AGGCACTGGAATTAGTCTCTGATGTAATCCAACATATTCACTGGGTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGGAATTAGTCTCTGATGTAATCCAACATATTCACTGGGTCCCT  550

seq1  TTAAATGTCCTATAACATCTCAGTACAGAAAGTGGAGAAAGAGAAGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTCCTATAACATCTCAGTACAGAAAGTGGAGAAAGAGAAGCATT  600

seq1  GGAGT  605
      |||||
seq2  GGAGT  605