BAC Information

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BAC

Clone NameB6Ng01-079B05
Chromosome14 (Build37)
Map Location 87,022,404 - 87,172,411
singlet/doubletdoublet
Overlap geneDiap3
Upstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311
Downstream geneEG665324, Tdrd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079B05.bB6Ng01-079B05.g
ACCDH894591DH894592
length1,161906
definitionDH894591|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B05, 5' end.DH894592|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,171,249 - 87,172,411)(87,022,404 - 87,023,309)
sequence
gaattcttttcttatctcatgttactttctagggaagagcggtttctccc
cttaattcttttaaagtcatttgtcacaagaacagtgctgtgggcagaaa
ttgtttctaactttcctaaatttgcttaatcccttgcagagacaggtgtc
agagagagatgcattccagttggctggtgtcagtagtgcattaacaaatc
gatgtgcattgaagctagacaatcctgaccggtgtgatgagtctcatcaa
gagacccatatgcaccttgccccagtggaggttagcgtcccacagttaaa
tgtggggtaaaagtccaagcatcactgttccgagtgtttcagggcggtca
agcattgcaccatcactgaaaagacctaagcttgggaaaatcacaggata
ttcttttacttcttaagtcaaacatacagatactaagtttctctctctct
ttttaacagatattcggcagagtctcagcccgatgtctcagaggcctgtt
ctcaaagtttgtaaccatggtaataaactttattcataaattgcatgcta
ttcttacctgcttttatcctgttggtctgtgatttttactacactgctat
tgaagttctcagtataactccaagagtaaaaaaatgcatagatgtttgtc
tttgctctgagatgacgggctctgttttccatactgccttatttccttga
agttatttcttctgtttttctaattaggtcgcaagtgaatgttttgttat
agttgtattgtttgaagttacatttgcacacttctgatcagagttggcta
cggcggtatttcagagcaatgccatttcatggtaactactttaaagttgc
agatccactaatcatcaggatacatgtgaagtattgagacctgtgttcat
ctttccttgccttgtttgtcagtgcagttgcaaagaattcaactttggag
aaactgtaaatacagatgcgtcgcatagacttttttcagtggacgatgct
acagttgctaaatgggagtgacttatcttcatcttctaacattgccagga
gttgagtttttttaaaagatccatatgaatgccttctatctgttctggtg
actctgtcttaaagcgtctgctcttactcattggttttctgttctgcaag
tctctgttctt
gaattctatcccaggtggttcccgttagaccttttgtgtttgcattcctc
tgttttatgtaagattccggttacctcaattgtaccttgcgaatatgtca
cccaacttccttattgtcctctgcataaaaagtctgaggctcgattcaaa
aattacactcagattccacacgaactctcatgtgtgtgtctgtttgttgc
tcatccatgctttgcccacctgcgtcgagagaccccgttccacgcagaca
cagggacccagagggtctgcggcataaaggcttgtgtcttttacttagga
actaaatgatcttaagtggggtagaaacccccaaatatttaccacaacac
atatctactcctgactcctctactttcttgagacatcccaaacacgtgcc
ttcccacctccatgttctcgccttttaaatattggttagatttatttaat
tttaagtatgagcatatttcgctacatgcatggctttgtgccatgtctgt
gcagtgtccgtggagggcggaggagggcatcagtttcccggaactggagt
gacagacaggcatgagctatttgattatgtgtgttctgggagccaaaccc
agatcctctgcaagagcagcaagttctcttatctgtggagagatctctcc
aatgttatccttttcttttttgacaattaagatatttggaagtaggagct
aaagggaactgcaaccctataggtggaacaacaatatgaactaaccagta
cccgggagctcttgtctttagctgcatatgtatcaaaagatgacctagtc
ggccatcactgcaaagagaggcccattggacttgcaaactttatatgccc
cagtacaggggaacgccagggccaaaaagtgggagtgggtgggtagggga
ttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87171249_87172411
seq2: B6Ng01-079B05.b_49_1209 (reverse)

seq1  AAGAACAGAGACTTGCCAGAACAGAAACCAAATGAGTAAGAGCAGACGCT  50
      ||||||||||||||| ||||||||||| | ||||||||||||||||||| 
seq2  AAGAACAGAGACTTG-CAGAACAGAAAACCAATGAGTAAGAGCAGACGC-  48

seq1  TTTAAGACAGAGTCA-CAGACAGGATAGAAGGCATTCATATGGGATCTTT  99
      ||||||||||||||| ||||   |||||||||||||||||| ||||||||
seq2  TTTAAGACAGAGTCACCAGAACAGATAGAAGGCATTCATAT-GGATCTTT  97

seq1  T-AAAAAACTCAACTCCTTGGCAAATGTTAG-AGATGAAGATAAGTCACT  147
      | ||||||||||||||| |||| |||||||| ||||||||||||||||||
seq2  TAAAAAAACTCAACTCC-TGGC-AATGTTAGAAGATGAAGATAAGTCACT  145

seq1  CCCATTTAGCAACTGTAGCATCGTCCACTGTAAACAGTCTATGCGACGCA  197
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  CCCATTTAGCAACTGTAGCATCGTCCACTGAAAAAAGTCTATGCGACGCA  195

seq1  TCTGTATTTACAGTTTCTCCAAAGTTGAATTCTTTGCAACTGCACTGACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTACAGTTTCTCCAAAGTTGAATTCTTTGCAACTGCACTGACA  245

seq1  AACAAGGCAAGGAAAGATGAACACAGGTCTCAATACTTCACATGTATCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGCAAGGAAAGATGAACACAGGTCTCAATACTTCACATGTATCCT  295

seq1  GATGATTAGTGGATCTGCAACTTTAAAGTAGTTACCATGAAATGGCATTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTAGTGGATCTGCAACTTTAAAGTAGTTACCATGAAATGGCATTG  345

seq1  CTCTGAAATACCGCCGTAGCCAACTCTGATCAGAAGTGTGCAAATGTAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAATACCGCCGTAGCCAACTCTGATCAGAAGTGTGCAAATGTAAC  395

seq1  TTCAAACAATACAACTATAACAAAACATTCACTTGCGACCTAATTAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAATACAACTATAACAAAACATTCACTTGCGACCTAATTAGAAA  445

seq1  AACAGAAGAAATAACTTCAAGGAAATAAGGCAGTATGGAAAACAGAGCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGAAATAACTTCAAGGAAATAAGGCAGTATGGAAAACAGAGCCC  495

seq1  GTCATCTCAGAGCAAAGACAAACATCTATGCATTTTTTTACTCTTGGAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCAGAGCAAAGACAAACATCTATGCATTTTTTTACTCTTGGAGT  545

seq1  TATACTGAGAACTTCAATAGCAGTGTAGTAAAAATCACAGACCAACAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGAGAACTTCAATAGCAGTGTAGTAAAAATCACAGACCAACAGGA  595

seq1  TAAAAGCAGGTAAGAATAGCATGCAATTTATGAATAAAGTTTATTACCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGGTAAGAATAGCATGCAATTTATGAATAAAGTTTATTACCAT  645

seq1  GGTTACAAACTTTGAGAACAGGCCTCTGAGACATCGGGCTGAGACTCTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAAACTTTGAGAACAGGCCTCTGAGACATCGGGCTGAGACTCTGC  695

seq1  CGAATATCTGTTAAAAAGAGAGAGAGAAACTTAGTATCTGTATGTTTGAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATCTGTTAAAAAGAGAGAGAGAAACTTAGTATCTGTATGTTTGAC  745

seq1  TTAAGAAGTAAAAGAATATCCTGTGATTTTCCCAAGCTTAGGTCTTTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGTAAAAGAATATCCTGTGATTTTCCCAAGCTTAGGTCTTTTCA  795

seq1  GTGATGGTGCAATGCTTGACCGCCCTGAAACACTCGGAACAGTGATGCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTGCAATGCTTGACCGCCCTGAAACACTCGGAACAGTGATGCTT  845

seq1  GGACTTTTACCCCACATTTAACTGTGGGACGCTAACCTCCACTGGGGCAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTACCCCACATTTAACTGTGGGACGCTAACCTCCACTGGGGCAA  895

seq1  GGTGCATATGGGTCTCTTGATGAGACTCATCACACCGGTCAGGATTGTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATATGGGTCTCTTGATGAGACTCATCACACCGGTCAGGATTGTCT  945

seq1  AGCTTCAATGCACATCGATTTGTTAATGCACTACTGACACCAGCCAACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAATGCACATCGATTTGTTAATGCACTACTGACACCAGCCAACTG  995

seq1  GAATGCATCTCTCTCTGACACCTGTCTCTGCAAGGGATTAAGCAAATTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATCTCTCTCTGACACCTGTCTCTGCAAGGGATTAAGCAAATTTA  1045

seq1  GGAAAGTTAGAAACAATTTCTGCCCACAGCACTGTTCTTGTGACAAATGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTAGAAACAATTTCTGCCCACAGCACTGTTCTTGTGACAAATGA  1095

seq1  CTTTAAAAGAATTAAGGGGAGAAACCGCTCTTCCCTAGAAAGTAACATGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAGAATTAAGGGGAGAAACCGCTCTTCCCTAGAAAGTAACATGA  1145

seq1  GATAAGAAAAGAATTC  1163
      ||||||||||||||||
seq2  GATAAGAAAAGAATTC  1161

seq1: chr14_87022404_87023309
seq2: B6Ng01-079B05.g_68_973

seq1  GAATTCTATCCCAGGTGGTTCCCGTTAGACCTTTTGTGTTTGCATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCAGGTGGTTCCCGTTAGACCTTTTGTGTTTGCATTCCTC  50

seq1  TGTTTTATGTAAGATTCCGGTTACCTCAATTGTACCTTGCGAATATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTAAGATTCCGGTTACCTCAATTGTACCTTGCGAATATGTCA  100

seq1  CCCAACTTCCTTATTGTCCTCTGCATAAAAAGTCTGAGGCTCGATTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTTCCTTATTGTCCTCTGCATAAAAAGTCTGAGGCTCGATTCAAA  150

seq1  AATTACACTCAGATTCCACACGAACTCTCATGTGTGTGTCTGTTTGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACTCAGATTCCACACGAACTCTCATGTGTGTGTCTGTTTGTTGC  200

seq1  TCATCCATGCTTTGCCCACCTGCGTCGAGAGACCCCGTTCCACGCAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCATGCTTTGCCCACCTGCGTCGAGAGACCCCGTTCCACGCAGACA  250

seq1  CAGGGACCCAGAGGGTCTGCGGCATAAAGGCTTGTGTCTTTTACTTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCCAGAGGGTCTGCGGCATAAAGGCTTGTGTCTTTTACTTAGGA  300

seq1  ACTAAATGATCTTAAGTGGGGTAGAAACCCCCAAATATTTACCACAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATGATCTTAAGTGGGGTAGAAACCCCCAAATATTTACCACAACAC  350

seq1  ATATCTACTCCTGACTCCTCTACTTTCTTGAGACATCCCAAACACGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACTCCTGACTCCTCTACTTTCTTGAGACATCCCAAACACGTGCC  400

seq1  TTCCCACCTCCATGTTCTCGCCTTTTAAATATTGGTTAGATTTATTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCTCCATGTTCTCGCCTTTTAAATATTGGTTAGATTTATTTAAT  450

seq1  TTTAAGTATGAGCATATTTCGCTACATGCATGGCTTTGTGCCATGTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTATGAGCATATTTCGCTACATGCATGGCTTTGTGCCATGTCTGT  500

seq1  GCAGTGTCCGTGGAGGGCGGAGGAGGGCATCAGTTTCCCGGAACTGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCCGTGGAGGGCGGAGGAGGGCATCAGTTTCCCGGAACTGGAGT  550

seq1  GACAGACAGGCATGAGCTATTTGATTATGTGTGTTCTGGGAGCCAAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGGCATGAGCTATTTGATTATGTGTGTTCTGGGAGCCAAACCC  600

seq1  AGATCCTCTGCAAGAGCAGCAAGTTCTCTTATCTGTGGAGAGATCTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTCTGCAAGAGCAGCAAGTTCTCTTATCTGTGGAGAGATCTCTCC  650

seq1  AATGTTATCCTTTTCTTTTTTGACAATTAAGATATTTGGAAGTAGGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCCTTTTCTTTTTTGACAATTAAGATATTTGGAAGTAGGAGCT  700

seq1  AAAGGGAACTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAACTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTA  750

seq1  CCCGGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGACCTAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGACCTAGTC  800

seq1  GGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCC  850

seq1  CAGTACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGGA  900

seq1  TTGGGG  906
      ||||||
seq2  TTGGGG  906