BAC Information

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BAC

Clone NameB6Ng01-080H24
Chromosome14 (Build37)
Map Location 101,133,682 - 101,281,011
singlet/doubletdoublet
Overlap genenone
Upstream geneEG546623, Klf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080H24.bB6Ng01-080H24.g
ACCDH895621DH895622
length1,0811,066
definitionDH895621|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H24, 5' end.DH895622|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,279,929 - 101,281,011)(101,133,682 - 101,134,754)
sequence
gaattcagtctgaaaacattgcccttggatgctttactgcagttatgacc
ttggagaaaatatagtagctttccccaagaaatagtatctgtctgtcact
gatatcttttagatattttatatgaaaaggaactgagggtcacttcaaac
ttcatgaagtacatcctaatagtcacttaaatatgagactaaaagatgac
tggggtagtaatacccttaggttgagtgataatacattaccaaagctgaa
aacgggcaaacgatcatgctagaaatattggccagggccttccaggcaga
aagaataatataaccatgttgatttttatgagtgggatcatttataatga
aaagagcataaagatttaatgtgcctcttacactgaacaaaggtaaaaga
aaataaatagattcttcccctttcctgcaaaccacttttgaatttggaat
ccagaaaactgctgcaggaatttgctatacttatattgatcacaaagcag
tgggccagggcaaagattcagcacccagcaggtggcagatcccagcaaga
ctctatccatcttctcttccaagcaggagatagactggatactgaacttt
attgtctcagtgctacttaaccaacaataagtgtttttcatagtagaact
aaaatttaaaatttaaacgttaaagcaaaagtaagttctgttatgattcc
tagaggagatttagtcttcagtctgtcagcatgtggtttcatttttggtg
taagtacaacaattttctctcttccaaaattctgtttctattttggtcat
actttaaacaccttgtcttacaattttggactgtgagcaaagaaaaaaca
gaaaaaataatttttacttgtttgtaaatatagtcttattatgttaatat
ttaggaacaattggtagatactgtttaaatatacagccctgttctgtatt
atatttattgtgaagttttatatgttattaaactcacagattgggggagg
ggtgaagccaaagattaccgtgaattctagtccatcctgagaatataaga
ataagactcatgggggggggggggggggaaa
gaattcatgtaagaaaagccattgtggtgattcacacttgcaattccaac
actgggaaggcagagacagacagatctccagctttctggaattcctgtct
cacctaactggttagttcatggacagtgaaatgctgtgtctcaaaagtaa
aagtgggtggaatctgaggaacagtacccagtgttaagattgatgaacac
aacatacacgcacctgcatatatacatgtatacacaaaaagaaactagta
cttaaatcatggaaagcacaatagttatgaaatcttcatatatcatgttt
tatatccctagattgaaccatgctaaatgtcaaagtaggcagttctgcat
atgcagagcccagcagaagtccagaatgtgtgtcacacaagtccccccat
tagaacaataggcttgggttattgatgctgtcgtgcttgtgccgtgtctt
atctatgtgacaaccatcagggcttaagagtgatctcagctgctgctcta
ggcaaaaacacagctcttttctgtgagaggaagtgagagcactggtgatg
tttgctgttttgaaattgccattggcattggcaatggagaaatatactga
gaagttaagaggaacactccttgacttgtttcatagtcaaatcatgctgg
ccagtaagctacgcagaaaccagttcatttctttttaaggtactgttttc
aaatcaggcctgtgtaggtgttcaccagttagcatcaagactggagctca
aacactcaggtcccaatacacttcattgccattttctgactttcttctat
ctcatttctgaacagatttcaagttcctggtcgacagatgaacaactctc
cttgtatgaaacaagcactactttttcctagtcttgccaggtgttaatag
tgccattcagaggccctggtggtaaagctatggaatgtaccctcccaggt
ggtctctgcaaggactagaggagacagacccagcctatgatgattgcttg
actttaactttcagctcgtcgagccagatttctgttgcccaggcaagtgg
gctctttcattagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101279929_101281011
seq2: B6Ng01-080H24.b_46_1126 (reverse)

seq1  TTT-----CCCCCCCCCCCCATGGGGTCTTATTC-TATA-TCTCAGGATG  43
      |||     |||||||||||||| | ||||||||| |||| ||||||||||
seq2  TTTCCCCCCCCCCCCCCCCCAT-GAGTCTTATTCTTATATTCTCAGGATG  49

seq1  GACTAGAATTCACGGTAATTCTTTGGCTTCACCCCTCCCCAATCCTGTGA  93
      |||||||||||||||||| ||||||||||||||||||||| |  ||||||
seq2  GACTAGAATTCACGGTAA-TCTTTGGCTTCACCCCTCCCCCAATCTGTGA  98

seq1  GTTTTAAATAACATATAAAACTTCAACAATAAATAATTAAATACAGAACA  143
      ||||  |||||||||||||||||| ||||||||||    |||||||||||
seq2  GTTT--AATAACATATAAAACTTC-ACAATAAATA---TAATACAGAACA  142

seq1  GGGCTGTATATTTAAACAGTATCTACCAATTGTTCCTAAATATTAACATA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTATATTTAAACAGTATCTACCAATTGTTCCTAAATATTAACATA  192

seq1  ATAAGACTATATTTTACAAACAAGTAAAAATTATTTTTTCTGTTTTTTCT  243
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACTATA-TTTACAAACAAGTAAAAATTATTTTTTCTGTTTTTTCT  241

seq1  TTGCTCACAGTCCAAAATTGTAAGACAAGGTGTTTAAAGTATGACCAAAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCACAGTCCAAAATTGTAAGACAAGGTGTTTAAAGTATGACCAAAA  291

seq1  TAGAAACAGAATTTTGGAAGAGAGAAAATTGTTGTACTTACACCAAAAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGAATTTTGGAAGAGAGAAAATTGTTGTACTTACACCAAAAAT  341

seq1  GAAACCACATGCTGACAGACTGAAGACTAAATCTCCTCTAGGAATCATAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACATGCTGACAGACTGAAGACTAAATCTCCTCTAGGAATCATAA  391

seq1  CAGAACTTACTTTTGCTTTAACGTTTAAATTTTAAATTTTAGTTCTACTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTTACTTTTGCTTTAACGTTTAAATTTTAAATTTTAGTTCTACTA  441

seq1  TGAAAAACACTTATTGTTGGTTAAGTAGCACTGAGACAATAAAGTTCAGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACACTTATTGTTGGTTAAGTAGCACTGAGACAATAAAGTTCAGT  491

seq1  ATCCAGTCTATCTCCTGCTTGGAAGAGAAGATGGATAGAGTCTTGCTGGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTCTATCTCCTGCTTGGAAGAGAAGATGGATAGAGTCTTGCTGGG  541

seq1  ATCTGCCACCTGCTGGGTGCTGAATCTTTGCCCTGGCCCACTGCTTTGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCACCTGCTGGGTGCTGAATCTTTGCCCTGGCCCACTGCTTTGTG  591

seq1  ATCAATATAAGTATAGCAAATTCCTGCAGCAGTTTTCTGGATTCCAAATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATAAGTATAGCAAATTCCTGCAGCAGTTTTCTGGATTCCAAATT  641

seq1  CAAAAGTGGTTTGCAGGAAAGGGGAAGAATCTATTTATTTTCTTTTACCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGGTTTGCAGGAAAGGGGAAGAATCTATTTATTTTCTTTTACCT  691

seq1  TTGTTCAGTGTAAGAGGCACATTAAATCTTTATGCTCTTTTCATTATAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGTGTAAGAGGCACATTAAATCTTTATGCTCTTTTCATTATAAA  741

seq1  TGATCCCACTCATAAAAATCAACATGGTTATATTATTCTTTCTGCCTGGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCACTCATAAAAATCAACATGGTTATATTATTCTTTCTGCCTGGA  791

seq1  AGGCCCTGGCCAATATTTCTAGCATGATCGTTTGCCCGTTTTCAGCTTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGGCCAATATTTCTAGCATGATCGTTTGCCCGTTTTCAGCTTTG  841

seq1  GTAATGTATTATCACTCAACCTAAGGGTATTACTACCCCAGTCATCTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTATTATCACTCAACCTAAGGGTATTACTACCCCAGTCATCTTTT  891

seq1  AGTCTCATATTTAAGTGACTATTAGGATGTACTTCATGAAGTTTGAAGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATATTTAAGTGACTATTAGGATGTACTTCATGAAGTTTGAAGTG  941

seq1  ACCCTCAGTTCCTTTTCATATAAAATATCTAAAAGATATCAGTGACAGAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGTTCCTTTTCATATAAAATATCTAAAAGATATCAGTGACAGAC  991

seq1  AGATACTATTTCTTGGGGAAAGCTACTATATTTTCTCCAAGGTCATAACT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTATTTCTTGGGGAAAGCTACTATATTTTCTCCAAGGTCATAACT  1041

seq1  GCAGTAAAGCATCCAAGGGCAATGTTTTCAGACTGAATTC  1083
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAAGCATCCAAGGGCAATGTTTTCAGACTGAATTC  1081

seq1: chr14_101133682_101134754
seq2: B6Ng01-080H24.g_70_1135

seq1  GAATTCATGTAAGAAAAGCCATTGTGGTGATTCACACTTGCAATTCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAAGAAAAGCCATTGTGGTGATTCACACTTGCAATTCCAAC  50

seq1  ACTGGGAAGGCAGAGACAGACAGATCTCCAGCTTTCTGGAATTCCTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAGGCAGAGACAGACAGATCTCCAGCTTTCTGGAATTCCTGTCT  100

seq1  CACCTAACTGGTTAGTTCATGGACAGTGAAATGCTGTGTCTCAAAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACTGGTTAGTTCATGGACAGTGAAATGCTGTGTCTCAAAAGTAA  150

seq1  AAGTGGGTGGAATCTGAGGAACAGTACCCAGTGTTAAGATTGATGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGTGGAATCTGAGGAACAGTACCCAGTGTTAAGATTGATGAACAC  200

seq1  AACATACACGCACCTGCATATATACATGTATACACAAAAAGAAACTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACACGCACCTGCATATATACATGTATACACAAAAAGAAACTAGTA  250

seq1  CTTAAATCATGGAAAGCACAATAGTTATGAAATCTTCATATATCATGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATCATGGAAAGCACAATAGTTATGAAATCTTCATATATCATGTTT  300

seq1  TATATCCCTAGATTGAACCATGCTAAATGTCAAAGTAGGCAGTTCTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCTAGATTGAACCATGCTAAATGTCAAAGTAGGCAGTTCTGCAT  350

seq1  ATGCAGAGCCCAGCAGAAGTCCAGAATGTGTGTCACACAAGTCCCCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGCCCAGCAGAAGTCCAGAATGTGTGTCACACAAGTCCCCCCAT  400

seq1  TAGAACAATAGGCTTGGGTTATTGATGCTGTCGTGCTTGTGCCGTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAATAGGCTTGGGTTATTGATGCTGTCGTGCTTGTGCCGTGTCTT  450

seq1  ATCTATGTGACAACCATCAGGGCTTAAGAGTGATCTCAGCTGCTGCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTGACAACCATCAGGGCTTAAGAGTGATCTCAGCTGCTGCTCTA  500

seq1  GGCAAAAACACAGCTCTTTTCTGTGAGAGGAAGTGAGAGCACTGGTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAACACAGCTCTTTTCTGTGAGAGGAAGTGAGAGCACTGGTGATG  550

seq1  TTTGCTGTTTTGAAATTGCCATTGGCATTGGCAATGGAGAAATATACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTTTTGAAATTGCCATTGGCATTGGCAATGGAGAAATATACTGA  600

seq1  GAAGTTAAGAGGAACACTCCTTGACTTGTTTCATAGTCAAATCATGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTAAGAGGAACACTCCTTGACTTGTTTCATAGTCAAATCATGCTGG  650

seq1  CCAGTAAGCTACGCAGAAACCAGTTCATTTCTTTTTAAGGTACTGTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGCTACGCAGAAACCAGTTCATTTCTTTTTAAGGTACTGTTTTC  700

seq1  AAATCAGGCCTGTGTAGGTGTTCACCAGTTAGCATCAAGACTGGAGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGCCTGTGTAGGTGTTCACCAGTTAGCATCAAGACTGGAGCTCA  750

seq1  AACACTCAGGTCCCAATACACTTCATTGCCATTTTCTGACTTTCTTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCAGGTCCCAATACACTTCATTGCCATTTTCTGACTTTCTTCTAT  800

seq1  CTCA-TTCTGAACAGATTTCAAGTTCCTGGTCGACAGATGAACAACTCTC  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCTGAACAGATTTCAAGTTCCTGGTCGACAGATGAACAACTCTC  850

seq1  CTTGTATGAAACAAGCACTAC-TTTTCCTAGTCTTGCCAGGTGTTAATAG  898
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTGTATGAAACAAGCACTACTTTTTCCTAGTCTTGCCAGGTGTTAATAG  900

seq1  TGCCATTCAGAGGCCCTGGTGGTAAAAGCTATGGAATGTACCCTCCCAGG  948
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCCATTCAGAGGCCCTGGTGGT-AAAGCTATGGAATGTACCCTCCCAGG  949

seq1  TGGTCTCTGCAGGGACTAGAAGGGAGACAGACCCAGCCTATGATGAATTG  998
      ||||||||||| ||||||||  ||||||||||||||||||||||| ||||
seq2  TGGTCTCTGCAAGGACTAGA--GGAGACAGACCCAGCCTATGATG-ATTG  996

seq1  CTTGACTTTAACTTTCAGCTCAGTCCGAGCCAGATTTCTGTTGCCCCAGG  1048
      ||||||||||||||||||||| || |||||||||||||||||| ||||||
seq2  CTTGACTTTAACTTTCAGCTC-GT-CGAGCCAGATTTCTGTTG-CCCAGG  1043

seq1  CAAGGTGGCCTTCCTTCATTAGTAC  1073
      ||||  |||  || |||||||||||
seq2  CAAGTGGGC--TCTTTCATTAGTAC  1066