BAC Information

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BAC

Clone NameB6Ng01-081B01
Chromosome14 (Build37)
Map Location 23,767,249 - 23,926,462
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneZfp503, EG665075, EG435392, LOC665068
Downstream geneKcnma1, LOC620499
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081B01.bB6Ng01-081B01.g
ACCDH896021DH896022
length1,123455
definitionDH896021|Mus musculus domesticus DNA, BAC clone: B6Ng01-081B01, 5' end.DH896022|Mus musculus domesticus DNA, BAC clone: B6Ng01-081B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,925,338 - 23,926,462)(23,767,249 - 23,767,709)
sequence
gaattccattacttcaaattgcaatattaataactgaaatgtgcagctga
gcaaatgctaattttctgcttttcctttcatttttttcccctttcaatcg
gaatctccctctaatcagaaaagtggggaaggaaaagcaatatggacacg
ggggaagcttaccatgtgagtgggcaatactaggctttatgggaggggaa
actgaggcatgggtgtgagtctacttactgaggggaacctgagcctcggg
gataaacttactgatctgagactaagtttcatgatagaaactcaatgatt
tttagctgaattttcttgtctgttcctttgtgaaaccccaagccccactg
gggaattgattccaacagtaaagaaagacaaattccagccagaatatctt
agaagctttttctttttccatttattctggtcacctgaattattatcaat
taatgttattttaaaagaagattgtatgtgtatttctgtgtgtatgtgct
tttgtttgcatgtatttctgtgccttgtgagcattcctggtgaccacaga
ggccagaagaaggcagtgaatctccttgaactggagtcccagatagttgt
gagcttccctgtctgtcctgagaatcaaagccaggttctctgcaaggtca
gccaatgctcttaatcgctaggccatctttctaccacccacttaagataa
ttttattctgaaggctgagtttatttacattcagaaaagacctgtgttgc
aaagtacaaaagaaagcattctccttttagttatggaattcactgagtgt
aatttaatttctgaagtggcctacatggcagtagtagtggagaaagggag
tgagcctcaagtcacaaactaacatcatcaataaatattgcctagcagga
gatctatcccccctttcttttggagaaaccaacacaggggtctaagtaga
caggcctatagataaccttggcttctcatgccatctattgtcaggtagct
tggagtctttatgcaaagcaaaatgatcagtttggactaatagtcagact
ccttaatgtttagcccttggatactaacagcatggaaaaaataataagaa
tgccctttttattctaagaatgt
cataatgtttaactctcttgtaaatgcttgcttgcccccatgagaacttg
gaaattaaaacaaatttaatataatccctttagatttttcttgttctcat
ctcttggctttcattttatttcacatcttttaattgtgttaggaagtctc
tgtatagcgtgggaaaataacttgttagttggaaaatcccctttctgcaa
tgggcagagcatttgagaagctcctattgatactgggacaatgatgtctt
ctactttgatgaaagaaaagtccaaacaaatggccaagaggatgaggtcc
actacccatgttggtattgagcatgacggcacagtgtataactcttcact
actcttgactctggcttaaattctatgcaaccaaactttgttcagacatt
ttccatgcaggctctgtgccttttgtctcattgctcccccctccccccca
ccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23925338_23926462
seq2: B6Ng01-081B01.b_44_1166 (reverse)

seq1  ACATGTCTTAGAATAAAAA-GGCATTCTTATAATTTTTTTCAATGCTGTA  49
      |||| |||||||||||||| ||||||||||| | ||||||| ||||||| 
seq2  ACAT-TCTTAGAATAAAAAGGGCATTCTTATTA-TTTTTTCCATGCTGTT  48

seq1  AGTATCCCAAGGGCTAAAACATTAAGGAGTCTGACTA-TAGT-CAAACTG  97
      ||||| ||||||||| ||||||||||||||||||||| |||| |||||||
seq2  AGTAT-CCAAGGGCT-AAACATTAAGGAGTCTGACTATTAGTCCAAACTG  96

seq1  ATCATTTTGCTTTTGCAT-AAGACTCCAAGCTAACCTGACAATAGATGGC  146
      |||||||||| ||||||| ||||||||||||| |||||||||||||||||
seq2  ATCATTTTGC-TTTGCATAAAGACTCCAAGCT-ACCTGACAATAGATGGC  144

seq1  ATGAGAAGCCAAGGTTATCTATAGGCCTGTCTACCTTAGACCCCTGTGTT  196
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGAGAAGCCAAGGTTATCTATAGGCCTGTCTA-CTTAGACCCCTGTGTT  193

seq1  GGTTTCTCCAAAAGAAAGGGGGGATAGATCTCCTGCTAGGCAATATTTAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCCAAAAGAAAGGGGGGATAGATCTCCTGCTAGGCAATATTTAT  243

seq1  TGATGATGTTAGTTTGTGACTTGAGGCTCACTCCC-TTCTCCACTACTAC  295
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGATGATGTTAGTTTGTGACTTGAGGCTCACTCCCTTTCTCCACTACTAC  293

seq1  TGCCATGTAGGCCACTTCAGAAATTAAATTACACTCAGTGAATTCCATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTAGGCCACTTCAGAAATTAAATTACACTCAGTGAATTCCATAA  343

seq1  CTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAGGTCTTTTCTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAGGTCTTTTCTGA  393

seq1  ATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAAGTGGGTGGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAAGTGGGTGGTAG  443

seq1  AAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGCAGAGAACCTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGCAGAGAACCTGG  493

seq1  CTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATCTGGGACTCCAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATCTGGGACTCCAG  543

seq1  TTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTCACCAGGAATGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTCACCAGGAATGC  593

seq1  TCACAAGGCACAGAAATACATGCAAACAAAAGCACATACACACAGAAATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGCACAGAAATACATGCAAACAAAAGCACATACACACAGAAATA  643

seq1  CACATACAATCTTCTTTTAAAATAACATTAATTGATAATAATTCAGGTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAATCTTCTTTTAAAATAACATTAATTGATAATAATTCAGGTGA  693

seq1  CCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTCTGGCTGGAATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTCTGGCTGGAATT  743

seq1  TGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGCTTGGGGTTTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGCTTGGGGTTTCA  793

seq1  CAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGAGTTTCTATCAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGAGTTTCTATCAT  843

seq1  GAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCTCAGGTTCCCCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCTCAGGTTCCCCT  893

seq1  CAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCCCATAAAGCCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCCCATAAAGCCTA  943

seq1  GTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCATATTGCTTTTCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCATATTGCTTTTCC  993

seq1  TTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAAGGGGAAAAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAAGGGGAAAAAAA  1043

seq1  TGAAAGGAAAAGCAGAAAATTAGCATTTGCTCAGCTGCACATTTCAGTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGAAAAGCAGAAAATTAGCATTTGCTCAGCTGCACATTTCAGTTA  1093

seq1  TTAATATTGCAATTTGAAGTAATGGAATTC  1125
      ||||||||||||||||||||||||||||||
seq2  TTAATATTGCAATTTGAAGTAATGGAATTC  1123

seq1: chr14_23767249_23767709
seq2: B6Ng01-081B01.g_71_531

seq1  GAATTCCATAATGTTTAACTCTCTTGTAAATGCTTGCTTGCCCCCATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATGTTTAACTCTCTTGTAAATGCTTGCTTGCCCCCATGAG  50

seq1  AACTTGGAAATTAAAACAAATTTAATATAATCCCTTTAGATTTTTCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGAAATTAAAACAAATTTAATATAATCCCTTTAGATTTTTCTTGT  100

seq1  TCTCATCTCTTGGCTTTCATTTTATTTCACATCTTTTAATTGTGTTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTCTTGGCTTTCATTTTATTTCACATCTTTTAATTGTGTTAGGA  150

seq1  AGTCTCTGTATAGCGTGGGAAAATAACTTGTTAGTTGGAAAATCCCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTGTATAGCGTGGGAAAATAACTTGTTAGTTGGAAAATCCCCTTT  200

seq1  CTGCAATGGGCAGAGCATTTGAGAAGCTCCTATTGATACTGGGACAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATGGGCAGAGCATTTGAGAAGCTCCTATTGATACTGGGACAATGA  250

seq1  TGTCTTCTACTTTGATGAAAGAAAAGTCCAAACAAATGGCCAAGAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTACTTTGATGAAAGAAAAGTCCAAACAAATGGCCAAGAGGATG  300

seq1  AGGTCCACTACCCATGTTGGTATTGAGCATGACGGCACAGTGTATAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCACTACCCATGTTGGTATTGAGCATGACGGCACAGTGTATAACTC  350

seq1  TTCACTACTCTTGACTCTGGCTTAAATTCTATGCAACCAAACTTTGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTACTCTTGACTCTGGCTTAAATTCTATGCAACCAAACTTTGTTCA  400

seq1  GACATTTTCCATGCAGGCTCTGTGCCTTTTGTCTCATTGCTCCCCCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTCCATGCAGGCTCTGTGCCTTTTGTCTCATTGCTCCCCCCTCC  450

seq1  CCCCCACCCCC  461
      |||||||||||
seq2  CCCCCACCCCC  461