BAC Information

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BAC

Clone NameB6Ng01-081C04
Chromosome14 (Build37)
Map Location 97,356,418 - 97,531,538
singlet/doubletdoublet
Overlap geneLOC668654
Upstream geneKlhl1, LOC100043366
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081C04.bB6Ng01-081C04.g
ACCDH896074DH896075
length1,1531,108
definitionDH896074|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C04, 5' end.DH896075|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,356,418 - 97,357,575)(97,530,411 - 97,531,538)
sequence
gaattctttaaacttatttgtatcaatagtactgatctctcccactgccc
actccttcccctttcctatgtttcagataatatttgttgactttgctctt
taaaacttttgttacttctgtaagttttcttggcactttgaaatgagttc
actatacacacatttaccccaaccaaatcagacaagtctgcttgttatgg
ttctgcactctcctttgtgccataggacagggcatagagcctagtaacta
gaaattgctatttctgatggaataattccttataaaggagctgatgtcca
caaaaatacatagagtggtacacatgtatgccagaaaccatgaaccttta
aacctagcccagcttctcctgagtacaatcatttatatggtgtgtgcaag
ttcacactaactgaaccgttaccattttgtaggctttgaggagagatcca
gctgtgaatggatttgagttttgcagtgtttgatcttttcacctgtaatt
atcttcctgtggttcaagaactcaatgcttaatgctttcatacagcattc
ttattttttaattatttttgcacatgagtttgtatggtcctttacttgcc
ttgtagtgtagacactaatttccccagttgctacagagtcatttcaattt
tctaaacaatttagcaccaaaacgacagcaattcaaaatatgcggataga
atttcatcatgacttcccttgttttctatggtgttttacatgtagaaata
tgatttgctttgcaattctatgtttaaatgagggctgcacaattatgaca
tgtatgtattatttccacataacaaatactgattctggactgataactat
tccttgatcacaaagaaagtttattcttggatatattactaatgtttcag
taaggactgactgttatctttcatctcaatcactttccaaaaccaatctg
aagaacttcttagagtgtatcagtgtggttattggatggaatgatgaacc
aagccaattcatttattactaaaaatatattaagaagcccttgagaaaaa
ttcataaccaccacacgaagaaatcctctacctcaactctgtcgggtcat
ctttgaaattataagcttatttgtactctttttgatgcatccgaagatca
gga
gaattccagaacagccaggcagcaaaggctctgttacacagagaaactct
gtccaaaacaaaaaacaaaaaacaaaaaaacaaaaaacaaacaaacaaaa
aacacccaagaaaaacaaaaacctaagacaagtaaaattacaaagaagac
atcatgatattttcaggtaagtggatggaaatagaatacaataatcctga
gtgagattccacagacccagaagacaaatacaagaaggcaagatagacag
acaaacacacacacagaattgaaatcaacacattctttttttttaaatat
tagataaaagtgtaaagcttctttgcaaaacttgatttatccctttcatt
ctaggcttctgtcatctgtgctcctctagaagagagttaagttttatcac
acacttatccattttgtttatgctattcaagtatgcttgaattttatatc
tgacaggtgaccagtaaattaattagatggtactaacttatggtaggcat
tttttatatatatatttgatgaaaaatggatgctatgtatcagacggtta
caacctcttatcaatatctgtgccacgaatccttaatttataggaaggaa
cttagcagcagtgtatacctgagttaaggatctggggatgggatggtgag
ccttagctatcaaagcaatctcagtgtacttacagttggcgcttctacaa
gaaagacaagaagatcaaagaactatccgccacaaagtataaacagcagt
gggaatgatgccctttgaagatgcatgaaagatctctgagcaatactgta
aagtaagcatcttcagtgttccacacttgtgttctctgtattggtaagtc
gtgggactacacagacttagtagcagaagctatattatcaatatccattg
ccaaatattagtcccaatattctatgcagttaaaaaaatatatcagtcaa
aactgattacttagttcgttctgggaaaacaaacaacaaacaatataaca
aacaactgcttgtaaagaactctatggagtattatttgcggagttgctaa
cgaaaaaagacaaaaagtgataagtgcatgcttggagtccaccattaaat
gtctgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97356418_97357575
seq2: B6Ng01-081C04.b_44_1196

seq1  GAATTCTTTAAACTTATTTGTATCAATAGTACTGATCTCTCCCACTGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAACTTATTTGTATCAATAGTACTGATCTCTCCCACTGCCC  50

seq1  ACTCCTTCCCCTTTCCTATGTTTCAGATAATATTTGTTGACTTTGCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTCCCCTTTCCTATGTTTCAGATAATATTTGTTGACTTTGCTCTT  100

seq1  TAAAACTTTTGTTACTTCTGTAAGTTTTCTTGGCACTTTGAAATGAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTTGTTACTTCTGTAAGTTTTCTTGGCACTTTGAAATGAGTTC  150

seq1  ACTATACACACATTTACCCCAACCAAATCAGACAAGTCTGCTTGTTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACACACATTTACCCCAACCAAATCAGACAAGTCTGCTTGTTATGG  200

seq1  TTCTGCACTCTCCTTTGTGCCATAGGACAGGGCATAGAGCCTAGTAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACTCTCCTTTGTGCCATAGGACAGGGCATAGAGCCTAGTAACTA  250

seq1  GAAATTGCTATTTCTGATGGAATAATTCCTTATAAAGGAGCTGATGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCTATTTCTGATGGAATAATTCCTTATAAAGGAGCTGATGTCCA  300

seq1  CAAAAATACATAGAGTGGTACACATGTATGCCAGAAACCATGAACCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATACATAGAGTGGTACACATGTATGCCAGAAACCATGAACCTTTA  350

seq1  AACCTAGCCCAGCTTCTCCTGAGTACAATCATTTATATGGTGTGTGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCCCAGCTTCTCCTGAGTACAATCATTTATATGGTGTGTGCAAG  400

seq1  TTCACACTAACTGAACCGTTACCATTTTGTAGGCTTTGAGGAGAGATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTAACTGAACCGTTACCATTTTGTAGGCTTTGAGGAGAGATCCA  450

seq1  GCTGTGAATGGATTTGAGTTTTGCAGTGTTTGATCTTTTCACCTGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAATGGATTTGAGTTTTGCAGTGTTTGATCTTTTCACCTGTAATT  500

seq1  ATCTTCCTGTGGTTCAAGAACTCAATGCTTAATGCTTTCATACAGCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGTGGTTCAAGAACTCAATGCTTAATGCTTTCATACAGCATTC  550

seq1  TTATTTTTTAATTATTTTTGCACATGAGTTTGTATGGTCCTTTACTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAATTATTTTTGCACATGAGTTTGTATGGTCCTTTACTTGCC  600

seq1  TTGTAGTGTAGACACTAATTTCCCCAGTTGCTACAGAGTCATTTCAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTGTAGACACTAATTTCCCCAGTTGCTACAGAGTCATTTCAATTT  650

seq1  TCTAAACAATTTAGCACCAAAACGACAGCAATTCAAAATATGCGGATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACAATTTAGCACCAAAACGACAGCAATTCAAAATATGCGGATAGA  700

seq1  ATTTCATCATGACTTCCCTTGTTTTCTATGGTGTTTTACATGTAGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCATGACTTCCCTTGTTTTCTATGGTGTTTTACATGTAGAAATA  750

seq1  TGATTTGCTTTGCAATTCTATGTTTAAATGAGGGCTGCACAATTATGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCTTTGCAATTCTATGTTTAAATGAGGGCTGCACAATTATGACA  800

seq1  TGTATGTATTATTTCCACATAACAAATACTGATTCTGGACTGATAACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATTATTTCCACATAACAAATACTGATTCTGGACTGATAACTAT  850

seq1  TCCTTGATCACAAAGAAAGTTTATTCTTGGATATAATTACTAATGTTTCA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCTTGATCACAAAGAAAGTTTATTCTTGGATAT-ATTACTAATGTTTCA  899

seq1  GTAAGGACTGACTGTTATCTTTCAATCTCAAATCACTTTCCAAAAACCAA  950
      ||||||||||||||||||||||| ||||| ||||||||||| ||||||||
seq2  GTAAGGACTGACTGTTATCTTTC-ATCTC-AATCACTTTCC-AAAACCAA  946

seq1  TCTGAAGAACTTCTTAGAGTGTATCAGTGTGGTTATTGGATGGAATGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAACTTCTTAGAGTGTATCAGTGTGGTTATTGGATGGAATGATG  996

seq1  AACCAAGCCAATTCATTTAATTACTAAAAATATATTAGGA--GCCTTGAG  1048
      |||||||||||||||||| |||||||||||||||||| ||   |||||||
seq2  AACCAAGCCAATTCATTT-ATTACTAAAAATATATTAAGAAGCCCTTGAG  1045

seq1  AAAAA-TCATAACCACCACACAAAGAAAT-CTCTACCTCAAACTCTGTCG  1096
      ||||| ||||||||||||||| ||||||| ||||||||| ||||||||||
seq2  AAAAATTCATAACCACCACACGAAGAAATCCTCTACCTC-AACTCTGTCG  1094

seq1  AGTCATCTTT-AGATTATTAGCTTATTTGTAAACTCTTTTTTAAATGCAT  1145
       ||||||||| | ||||| |||||||||||  |||||||||   ||||||
seq2  GGTCATCTTTGAAATTATAAGCTTATTTGT--ACTCTTTTT--GATGCAT  1140

seq1  CCAGAAG-TCAGGA  1158
      || |||| ||||||
seq2  CC-GAAGATCAGGA  1153

seq1: chr14_97530411_97531538
seq2: B6Ng01-081C04.g_70_1177 (reverse)

seq1  ATTCAGAACATTTAAATAGTGTGGACTACCAAAGCATGCACTTATTACAT  50
      |||||| |||||||   |  |||||||  | |||||||||||||| || |
seq2  ATTCAG-ACATTTA---ATGGTGGACT--CCAAGCATGCACTTATCAC-T  43

seq1  TATTGTCTTTTTTTTTCTGTTAGCAAAACTCCTGCAAATAATTACTTCCA  100
      | |||||||||||     ||||||  |||||| |||||||| ||| ||||
seq2  TTTTGTCTTTTTT----CGTTAGC--AACTCC-GCAAATAA-TAC-TCCA  84

seq1  TAGAGTGTCTCTACAAGCAGTTTGTTTGTTTATTTGTTTGTTTGTTTGTT  150
      |||||| ||| ||||||||| |||||||||   ||||||| |||||||||
seq2  TAGAGT-TCTTTACAAGCAG-TTGTTTGTTATATTGTTTG-TTGTTTGTT  131

seq1  TTCCCAGAACGAACTAAGTAATCAGTTTTTGACTGATATATTTTTTTAAC  200
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCCCAGAACGAACTAAGTAATCAG-TTTTGACTGATATATTTTTTTAAC  180

seq1  TGCATAGAATATTTGGGACT-ATATTTGGCAATGGATATTGATAAATATA  249
      ||||||||||| |||||||| |||||||||||||||||||||| ||||||
seq2  TGCATAGAATA-TTGGGACTAATATTTGGCAATGGATATTGAT-AATATA  228

seq1  GCTTCTGCTACTAAGTCTGTGTAGTCCCACGACTTACCAATACAGAGAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGCTACTAAGTCTGTGTAGTCCCACGACTTACCAATACAGAGAAC  278

seq1  ACAAGTGTGGAACACTGAAGATGCTTACCTTACAGTATTGCTCAGAGATC  349
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAAGTGTGGAACACTGAAGATGCTTACTTTACAGTATTGCTCAGAGATC  328

seq1  TTTCATGCATCTTCAAAGGGCATCATTCCCACTGCTGTTTATACTTTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCATCTTCAAAGGGCATCATTCCCACTGCTGTTTATACTTTGTG  378

seq1  GCGGATAGTTCTTTGATCTTCTTGTCTTTCTTGTAGAAGCGCC-ACTGTA  448
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCGGATAGTTCTTTGATCTTCTTGTCTTTCTTGTAGAAGCGCCAACTGTA  428

seq1  AGTACACTGAGATTGCTTTGATAGCTAAGGCTCACCATCCCATCCCCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTGAGATTGCTTTGATAGCTAAGGCTCACCATCCCATCCCCAGA  478

seq1  TCCTTAACTCAGGTATACACTGCTGCTAAGTTCCTTCCTATAAATTAAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAACTCAGGTATACACTGCTGCTAAGTTCCTTCCTATAAATTAAGG  528

seq1  ATTCGTGGCACAGATATTGATAAGAGGTTGTAACCGTCTGATACATAGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTGGCACAGATATTGATAAGAGGTTGTAACCGTCTGATACATAGCA  578

seq1  TCCATTTTTCATCAAATATATATATAAAAAATGCCTACCATAAGTTAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTCATCAAATATATATATAAAAAATGCCTACCATAAGTTAGTA  628

seq1  CCATCTAATTAATTTACTGGTCACCTGTCAGATATAAAATTCAAGCATAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAATTAATTTACTGGTCACCTGTCAGATATAAAATTCAAGCATAC  678

seq1  TTGAATAGCATAAACAAAATGGATAAGTGTGTGATAAAACTTAACTCTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAGCATAAACAAAATGGATAAGTGTGTGATAAAACTTAACTCTCT  728

seq1  TCTAGAGGAGCACAGATGACAGAAGCCTAGAATGAAAGGGATAAATCAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGAGCACAGATGACAGAAGCCTAGAATGAAAGGGATAAATCAAG  778

seq1  TTTTGCAAAGAAGCTTTACACTTTTATCTAATATTTAAAAAAAAAGAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAAAGAAGCTTTACACTTTTATCTAATATTTAAAAAAAAAGAATG  828

seq1  TGTTGATTTCAATTCTGTGTGTGTGTTTGTCTGTCTATCTTGCCTTCTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTTCAATTCTGTGTGTGTGTTTGTCTGTCTATCTTGCCTTCTTG  878

seq1  TATTTGTCTTCTGGGTCTGTGGAATCTCACTCAGGATTATTGTATTCTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCTTCTGGGTCTGTGGAATCTCACTCAGGATTATTGTATTCTAT  928

seq1  TTCCATCCACTTACCTGAAAATATCATGATGTCTTCTTTGTAATTTTACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCACTTACCTGAAAATATCATGATGTCTTCTTTGTAATTTTACT  978

seq1  TGTCTTAGGTTTTTGTTTTTCTTGGGTGTTTTTTGTTTGTTTGTTTTTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGGTTTTTGTTTTTCTTGGGTGTTTTTTGTTTGTTTGTTTTTTG  1028

seq1  TTTTTTTGTTTTTTGTTTTTTGTTTTGGACAGAGTTTCTCTGTGTAACAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTTTTGTTTTTTGTTTTGGACAGAGTTTCTCTGTGTAACAG  1078

seq1  AGCCTTTGCTGCCTGGCTGTTCTGGAATTC  1128
      ||||||||||||||||||||||||||||||
seq2  AGCCTTTGCTGCCTGGCTGTTCTGGAATTC  1108