BAC Information

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BAC

Clone NameB6Ng01-081I08
Chromosome14 (Build37)
Map Location 28,324,089 - 28,452,531
singlet/doubletdoublet
Overlap geneLOC665370, Erc2
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081I08.bB6Ng01-081I08.g
ACCDH896350DH896351
length1,077697
definitionDH896350|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I08, 5' end.DH896351|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,451,448 - 28,452,531)(28,324,089 - 28,324,783)
sequence
gaattctttcaactcattaagtttatccctgtctgattagattggttcaa
actcagtttgcgatttaaaggtgcttcagccatcgttatttttgttttca
aggggtgggttctcctttcttccttcctcctggacagataagaagcagtg
ggcttagcagtaatactttttatagttttacttcaatttttttcatacaa
tgtattttaattctattttaccctctccaaacacctcccagaaccatatc
tccctacccacccaatactctctctctctttccctcccccttctccctga
gcacaaaaacaaaaatcaaaacaaacaagcaaaagacaagaaagtgtcaa
aacaaagcaaaaataaacaacaacaaaaagagttcattttgtgatggcca
cctattctgtattggcctgccctgaacaaggttattaaactcagattttt
ccttttgcaagtggatatcaaaaggaaaggactctattatttttaaaaat
aagaaaaatcagttaggctgcaatattatatatccacagataccaaggaa
tcgcaatagtaaactatttaatcttaaatgctacaaaaatatgaattagg
agcaaaaaactcccactgccatagctgaaattgtcaaaaatgctttccaa
ccattttccccaaatccctatgaaacggaagcatgtgtgtacacacctta
ccaccctccctgttagcgctctctcgtgctcattttataattactgtttt
tccacgtgcagaaaaagaactcagctgcctcggatcatgttttatagcta
agcacttgatggaggaagttgacaaccctccatacccaggtgagcaaggg
ctcctgtgccccagggttagttcttcccatcagccgttgttcctgcgtac
attttaaactctatccacttgttccaaagtatgaacataaaatgtaaaag
acctaaaaacttctaaagaaaggtgcgattaaagtatacggctaaatcca
tagtaaagctacaaaatcaagaattaaaatgtcaaagtattgagatgtta
aataaattaaattaaagattatggccg
gaattccaggtcagcaagagctacataaaaagcctatgtgttatatataa
aataaataaataaataaaagggctagagtcggcaggttaatagacatttt
ctgggaggtagagtagtgtgaatttgaaagtcttacctttttctttgagt
tagtgtggcatgtatacatgcaaggtgtgagttctcatgtgtgctcgagt
gggtgcacacacacatgtgcgaggccacaggtggatggagactggggttt
tcttccctatttctctccctttgtatattgaaggctttctcacgtggagc
ccagagtttgctaactcagctggtttatctagccagctcgccctacccca
tctctgctgtgggggtctcagcaaataccagggccagcaaaatgtctgtt
tgcaggaggcaaggcaaaagctcagttcaactcaactcagtagccagtgt
tggttccagttttgacagcctggctccgagtggcttttttcaggcatatt
taaagccagcacaatgtggaaaacttttttctggtgataaataactcaac
gcagtatgtacaacaaaacttgacaagatttcatctaaactcttgtaaag
tgcacgtaacatcctccatatgggataggttctattgattaactaaggaa
agcaggctcaagggaaacagcactcatagggacctgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28451448_28452531
seq2: B6Ng01-081I08.b_45_1121 (reverse)

seq1  CGGCCATAATCTTTTAATTTAATTTTATTTAACATCTCATTACTTTGACC  50
      ||||||||||| |||||||||| |||||||||||||||| ||||||||| 
seq2  CGGCCATAATC-TTTAATTTAA-TTTATTTAACATCTCAATACTTTGACA  48

seq1  TTTT-ATTCTTGATTTTTGTTATGCTTTTAACTTATGGATTTAGCCGTAT  99
      |||| |||||||| ||||||   |||||  || |||||||||||||||||
seq2  TTTTAATTCTTGA-TTTTGT--AGCTTT--AC-TATGGATTTAGCCGTAT  92

seq1  ACTTTAATCGCACCTTTCTTTAGAAAGTTTTTAGGTCTTTTACATTTTAT  149
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTTTAATCGCACCTTTCTTTAG-AAGTTTTTAGGTCTTTTACATTTTAT  141

seq1  GTTCATACTTTGGAACAAGTGGATAGAGTTTAAAATGTACGCAGGAACAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATACTTTGGAACAAGTGGATAGAGTTTAAAATGTACGCAGGAACAA  191

seq1  CGGCTGATGGGAAGAACTAACCCTGGGGCACAGGAGCCCTTGCTCACCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGATGGGAAGAACTAACCCTGGGGCACAGGAGCCCTTGCTCACCTG  241

seq1  GGTATGGAGGGTTGTCAACTTCCTCCATCAAGTGCTTAGCTATAAAACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGAGGGTTGTCAACTTCCTCCATCAAGTGCTTAGCTATAAAACAT  291

seq1  GATCCGAGGCAGCTGAGTTCTTTTTCTGCACGTGG-AAAACAGTAATTAT  348
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GATCCGAGGCAGCTGAGTTCTTTTTCTGCACGTGGAAAAACAGTAATTAT  341

seq1  AAAATGAGCACGAGAGAGCGCTAACAGGGAGGGTGGTAAGGTGTGTACAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGCACGAGAGAGCGCTAACAGGGAGGGTGGTAAGGTGTGTACAC  391

seq1  ACATGCTTCCGTTTCATAGGGATTTGGGGAAAATGGTTGGAAAGCATTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTTCCGTTTCATAGGGATTTGGGGAAAATGGTTGGAAAGCATTTT  441

seq1  TGACAATTTCAGCTATGGCAGTGGGAGTTTTTTGCTCCTAATTCATATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTTCAGCTATGGCAGTGGGAGTTTTTTGCTCCTAATTCATATTT  491

seq1  TTGTAGCATTTAAGATTAAATAGTTTACTATTGCGATTCCTTGGTATCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCATTTAAGATTAAATAGTTTACTATTGCGATTCCTTGGTATCTG  541

seq1  TGGATATATAATATTGCAGCCTAACTGATTTTTCTTATTTTTAAAAATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATATAATATTGCAGCCTAACTGATTTTTCTTATTTTTAAAAATAA  591

seq1  TAGAGTCCTTTCCTTTTGATATCCACTTGCAAAAGGAAAAATCTGAGTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCCTTTCCTTTTGATATCCACTTGCAAAAGGAAAAATCTGAGTTT  641

seq1  AATAACCTTGTTCAGGGCAGGCCAATACAGAATAGGTGGCCATCACAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTTGTTCAGGGCAGGCCAATACAGAATAGGTGGCCATCACAAAA  691

seq1  TGAACTCTTTTTGTTGTTGTTTATTTTTGCTTTGTTTTGACACTTTCTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTTTTTGTTGTTGTTTATTTTTGCTTTGTTTTGACACTTTCTTG  741

seq1  TCTTTTGCTTGTTTGTTTTGATTTTTGTTTTTGTGCTCAGGGAGAAGGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCTTGTTTGTTTTGATTTTTGTTTTTGTGCTCAGGGAGAAGGGG  791

seq1  GAGGGAAAGAGAGAGAGAGTATTGGGTGGGTAGGGAGATATGGTTCTGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAGAGAGAGAGAGTATTGGGTGGGTAGGGAGATATGGTTCTGGG  841

seq1  AGGTGTTTGGAGAGGGTAAAATAGAATTAAAATACATTGTATGAAAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTGGAGAGGGTAAAATAGAATTAAAATACATTGTATGAAAAAAA  891

seq1  TTGAAGTAAAACTATAAAAAGTATTACTGCTAAGCCCACTGCTTCTTATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAAAACTATAAAAAGTATTACTGCTAAGCCCACTGCTTCTTATC  941

seq1  TGTCCAGGAGGAAGGAAGAAAGGAGAACCCACCCCTTGAAAACAAAAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGAGGAAGGAAGAAAGGAGAACCCACCCCTTGAAAACAAAAATA  991

seq1  ACGATGGCTGAAGCACCTTTAAATCGCAAACTGAGTTTGAACCAATCTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGGCTGAAGCACCTTTAAATCGCAAACTGAGTTTGAACCAATCTAA  1041

seq1  TCAGACAGGGATAAACTTAATGAGTTGAAAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGGGATAAACTTAATGAGTTGAAAGAATTC  1077

seq1: chr14_28324089_28324783
seq2: B6Ng01-081I08.g_69_765

seq1  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50

seq1  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100

seq1  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150

seq1  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200

seq1  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250

seq1  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300

seq1  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350

seq1  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400

seq1  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450

seq1  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500

seq1  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550

seq1  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600

seq1  TGCACGTAACATCCTCCATAT-GGATAGGTTCTATTGATTAACTAAGG-A  648
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  TGCACGTAACATCCTCCATATGGGATAGGTTCTATTGATTAACTAAGGAA  650

seq1  AGCAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGG  695
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGG  697