BAC Information

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BAC

Clone NameB6Ng01-082C23
Chromosome14 (Build37)
Map Location 26,527,657 - 26,645,839
singlet/doubletdoublet
Overlap gene2310047A01Rik
Upstream geneLOC669315, LOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif
Downstream geneAnxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082C23.bB6Ng01-082C23.g
ACCDH896819DH896820
length1,109844
definitionDH896819|Mus musculus domesticus DNA, BAC clone: B6Ng01-082C23, 5' end.DH896820|Mus musculus domesticus DNA, BAC clone: B6Ng01-082C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,644,701 - 26,645,839)(26,527,657 - 26,528,499)
sequence
gaattccttctttcccaccccctgaacatcggcttgtggttttatgcttt
aagaacctgctccctccttccaaggttgaggcttcaactccctatcctga
ctgcctccctagccagctagaagtgcttctcgaggtgaataaagttgctt
ctggtttgtttctgactctggtggtcctgccctcattattaacacaaccc
tagaccccaccccaccccaacactccactctgaactacaccaaactgact
caactgacttacactcacgaattgttctccactcacacaccgttgttggg
gattaagggcgtgtctgtattccagccggagcgattaaagatgtgtgtca
ttgaagccagatcacacagacctagaaggtcttaggctgtgatcccttgt
cagagcagccgtgttgctggattaaaattcctctacacaatacagccaat
ctacatgttcatctcccatggtaagggatagaagggactcccaggtccaa
aggaaacttcatcttcccatattccaaaaggcagaaaagataaatggtca
gctgtggtacctattagcataacacaattgacgttggcttccagggtccc
aacatcacaagtggctgttacacattgcagagtccatactagcatcccca
gctctcctcacctcctcccctgtcccaaactactgagaagacaccttcag
ggtgtgtccatgagcaagtgatggcaggctttcggtattgtcatttctgt
ggcccttgaccagttttctttttctttctttctcccccccccaccccgag
acagggtttctctgtatagccctggctgtcctggaactcactttgtagac
caggctgggctcaaatccagaatctgcctgcctctgcctcccaagtgctg
ggattaaaggcatgcgcccaccaccacccagtttattgatcagttttcta
ttgtaatgcaaatgtttgtaaattgcctgtctcccaaagtgaatcccaag
gatattatttaaaagcagctctcggtgggaggtcaacagcctcatgacaa
ggttaccttaacatgatcatgttctcttgctgcgaattggttcaactgat
gacactgga
gaattccgggctgcctgggaaggagccctgagttctgtgggttttcctgg
agcaaccctgagaggttgtagaaaggggcttttcgagtccctcggcctct
tggaaccttagcttcctctaggtgactacttcctcttaccccccgacccc
cacgagttacttcaaggagcaaaagagatgatgtgtatgaagtaggaagt
ctggtatctggcacacctcactccctgcccctctgccaccctggacccat
ttggcccggcttcccttggagttcacctctgacccaggagtgggcacaga
gatggagaggacagcacacccaacctgttaccagagagtcactgccgtct
gtttaccagtctctcttcagagctccctacccccaaataccaaggccatg
agttgtctaatttgggccaggacactccagtatccagtagatgtgaccgt
gaccgaagtgacatcacagaaaacaggattccttcaactgtggaggaaac
ttgtggctgtgcctgggctcagggcccagggctggctcttgtccccatct
cagatctccctctgctgatgagggacttaaggcctgtgggcccacaggaa
gttcatttcccttatgctctgaagctccgtcactcctgtgagaaagcact
ggtcaaggggggaagggtaaagctttcctggacatcctgggggctagacc
ccaccctcatcgagccccaccaccaccagagaagtgtaccatcccacccc
ccacccccaagggctctcagactgctgcaggcagctagctggcctgctgt
gtgagttttgtgtgtttgtgcatacagtggggggagggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26644701_26645839
seq2: B6Ng01-082C23.b_48_1156 (reverse)

seq1  TCCAGTTGTCATTCCAGTCTGAACCAATCCGCAGCAAGAGAACACTTGAT  50
      ||||| ||||||  |||| ||||||||| |||||||||||||||  ||||
seq2  TCCAG-TGTCAT--CAGT-TGAACCAATTCGCAGCAAGAGAACA--TGAT  44

seq1  CCATTGTTTAAGGGTTACCCTTTGTCACTGAGGGCTGTTTGACCTTCCCC  100
      |   ||||  | ||| |||  |||||| ||| ||||| |||||||  |||
seq2  C--ATGTT--AAGGTAACC--TTGTCA-TGA-GGCTG-TTGACCT--CCC  83

seq1  ACCGGAGGAGCTTGCTTTTTAATATAATAATCCCTGGGAATCACCTTTTG  150
      ||||   |||| |||||||  | ||||| |||| ||||| ||||  ||||
seq2  ACCG--AGAGC-TGCTTTT--AAATAAT-ATCCTTGGGATTCAC--TTTG  125

seq1  GGAAGACAAGC-ATTTACAAACATTTGCATTACAGTAGAAAACTGATCAA  199
      || ||||| || |||||||||||||||||||||| |||||||||||||||
seq2  GG-AGACAGGCAATTTACAAACATTTGCATTACAATAGAAAACTGATCAA  174

seq1  TAAACTGGGT-GTGGT-GGCGCATGCCTTTAATCCCAGCACTTGGGAGGC  247
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  TAAACTGGGTGGTGGTGGGCGCATGCCTTTAATCCCAGCACTTGGGAGGC  224

seq1  AGAGGCAGGCAGATTTCTGGATTTGAGGCCAGCCTGGTCTACAAAGTGAG  297
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  AGAGGCAGGCAGA-TTCTGGATTTGAGCCCAGCCTGGTCTACAAAGTGAG  273

seq1  TTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGGGGGGTGGGG  347
      ||||||||||||||||||||||||||||||||||||||||      ||| 
seq2  TTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCG------GGGT  317

seq1  GGGGGGGGGAGAAAGAAAGAAAAAGAAAACTGGTCAAGGGCCACAGAAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGAGAAAGAAAGAAAAAGAAAACTGGTCAAGGGCCACAGAAAT  367

seq1  GACAATACCGAAAGCCTGCCATCACTTGCTCATGGACACACCCTGAAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATACCGAAAGCCTGCCATCACTTGCTCATGGACACACCCTGAAGGT  417

seq1  GTCTTCTCAGTAGTTTGGGACAGGGGAGGAGGTGAGGAGAGCTGGGGATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCAGTAGTTTGGGACAGGGGAGGAGGTGAGGAGAGCTGGGGATG  467

seq1  CTAGTATGGACTCTGCAATGTGTAACAGCCACTTGTGATGTTGGGACCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATGGACTCTGCAATGTGTAACAGCCACTTGTGATGTTGGGACCCT  517

seq1  GGAAGCCAACGTCAATTGTGTTATGCTAATAGGTACCACAGCTGACCATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAACGTCAATTGTGTTATGCTAATAGGTACCACAGCTGACCATT  567

seq1  TATCTTTTCTGCCTTTTGGAATATGGGAAGATGAAGTTTCCTTTGGACCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTCTGCCTTTTGGAATATGGGAAGATGAAGTTTCCTTTGGACCT  617

seq1  GGGAGTCCCTTCTATCCCTTACCATGGGAGATGAACATGTAGATTGGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCCCTTCTATCCCTTACCATGGGAGATGAACATGTAGATTGGCTG  667

seq1  TATTGTGTAGAGGAATTTTAATCCAGCAACACGGCTGCTCTGACAAGGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTAGAGGAATTTTAATCCAGCAACACGGCTGCTCTGACAAGGGA  717

seq1  TCACAGCCTAAGACCTTCTAGGTCTGTGTGATCTGGCTTCAATGACACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTAAGACCTTCTAGGTCTGTGTGATCTGGCTTCAATGACACAC  767

seq1  ATCTTTAATCGCTCCGGCTGGAATACAGACACGCCCTTAATCCCCAACAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAATCGCTCCGGCTGGAATACAGACACGCCCTTAATCCCCAACAA  817

seq1  CGGTGTGTGAGTGGAGAACAATTCGTGAGTGTAAGTCAGTTGAGTCAGTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTGTGAGTGGAGAACAATTCGTGAGTGTAAGTCAGTTGAGTCAGTT  867

seq1  TGGTGTAGTTCAGAGTGGAGTGTTGGGGTGGGGTGGGGTCTAGGGTTGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAGTTCAGAGTGGAGTGTTGGGGTGGGGTGGGGTCTAGGGTTGTG  917

seq1  TTAATAATGAGGGCAGGACCACCAGAGTCAGAAACAAACCAGAAGCAACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGAGGGCAGGACCACCAGAGTCAGAAACAAACCAGAAGCAACT  967

seq1  TTATTCACCTCGAGAAGCACTTCTAGCTGGCTAGGGAGGCAGTCAGGATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCACCTCGAGAAGCACTTCTAGCTGGCTAGGGAGGCAGTCAGGATA  1017

seq1  GGGAGTTGAAGCCTCAACCTTGGAAGGAGGGAGCAGGTTCTTAAAGCATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTGAAGCCTCAACCTTGGAAGGAGGGAGCAGGTTCTTAAAGCATA  1067

seq1  AAACCACAAGCCGATGTTCAGGGGGTGGGAAAGAAGGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAAGCCGATGTTCAGGGGGTGGGAAAGAAGGAATTC  1109

seq1: chr14_26527657_26528499
seq2: B6Ng01-082C23.g_67_910

seq1  GAATTCCGGGCTGCCTGGGAAGGAGCCCTGAGTTCTGTGGGTTTTCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGGCTGCCTGGGAAGGAGCCCTGAGTTCTGTGGGTTTTCCTGG  50

seq1  AGCAACCCTGAGAGGTTGTAGAAAGGGGCTTTTCGAGTCCCTCGGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCCTGAGAGGTTGTAGAAAGGGGCTTTTCGAGTCCCTCGGCCTCT  100

seq1  TGGAACCTTAGCTTCCTCTAGGTGACTACTTCCTCTTACCCCCCGACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCTTAGCTTCCTCTAGGTGACTACTTCCTCTTACCCCCCGACCCC  150

seq1  CACGAGTTACTTCAAGGAGCAAAAGAGATGATGTGTATGAAGTAGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGTTACTTCAAGGAGCAAAAGAGATGATGTGTATGAAGTAGGAAGT  200

seq1  CTGGTATCTGGCACACCTCACTCCCTGCCCCTCTGCCACCCTGGACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCTGGCACACCTCACTCCCTGCCCCTCTGCCACCCTGGACCCAT  250

seq1  TTGGCCCGGCTTCCCTTGGAGTTCACCTCTGACCCAGGAGTGGGCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCGGCTTCCCTTGGAGTTCACCTCTGACCCAGGAGTGGGCACAGA  300

seq1  GATGGAGAGGACAGCACACCCAACCTGTTACCAGAGAGTCACTGCCGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAGGACAGCACACCCAACCTGTTACCAGAGAGTCACTGCCGTCT  350

seq1  GTTTACCAGTCTCTCTTCAGAGCTCCCTACCCCCAAATACCAAGGCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCAGTCTCTCTTCAGAGCTCCCTACCCCCAAATACCAAGGCCATG  400

seq1  AGTTGTCTAATTTGGGCCAGGACACTCCAGTATCCAGTAGATGTGACCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCTAATTTGGGCCAGGACACTCCAGTATCCAGTAGATGTGACCGT  450

seq1  GACCGAAGTGACATCACAGAAAACAGGATTCCTTCAACTGTGGAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGAAGTGACATCACAGAAAACAGGATTCCTTCAACTGTGGAGGAAAC  500

seq1  TTGTGGCTGTGCCTGGGCTCAGGGCCCAGGGCTGGCTCTTGTCCCCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCTGTGCCTGGGCTCAGGGCCCAGGGCTGGCTCTTGTCCCCATCT  550

seq1  CAGATCTCCCTCTGCTGATGAGGGACTTAAGGCCTGTGGGCCCACAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCCCTCTGCTGATGAGGGACTTAAGGCCTGTGGGCCCACAGGAA  600

seq1  GTTCATTTCCCTTATGCTCTGAAGCTCCGTCACTCCTGTGAGAAAGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTCCCTTATGCTCTGAAGCTCCGTCACTCCTGTGAGAAAGCACT  650

seq1  GGTCAAGGGGGGAAGGGTAAAGCTTTCCTGGACATCCTGGGGGCTAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGGGGGGAAGGGTAAAGCTTTCCTGGACATCCTGGGGGCTAGACC  700

seq1  CCACCCTCATCGAGCCCCACCACCACCAGAGAAGTGTACCATCCCACCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCATCGAGCCCCACCACCACCAGAGAAGTGTACCATCCCACCCC  750

seq1  CCACCCCCAAGGGCTCTCAGACTGCTGCAGGCAGCTAGCTGGCCTGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCAAGGGCTCTCAGACTGCTGCAGGCAGCTAGCTGGCCTGCTGT  800

seq1  GTGAGTTTTGTGTGTTTGTGCATACAAGTGGGGGA-GGGGTGGG  843
      ||||||||||||||||||||||||||   |||||| ||||||||
seq2  GTGAGTTTTGTGTGTTTGTGCATACAGTGGGGGGAGGGGGTGGG  844