BAC Information

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BAC

Clone NameB6Ng01-082G01
Chromosome14 (Build37)
Map Location 74,223,291 - 74,224,213
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
Downstream geneEG629578, LOC629583, Htr2a, LOC668508, Esd, Lrch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082G01.bB6Ng01-082G01.g
ACCDH896948DH896949
length1,187926
definitionDH896948|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G01, 5' end.DH896949|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaacttcactaataaggaaatacttgagtttgtttttctttt
tctttttcttttttttttttttttaagaaaggaccattaagaattcatca
atgagaaaataaaatcaaataggaaaatgtgttcacaccatatgccacta
agggaatgtaatctaaagcaatgagagagtgacacacataagagagaacg
gaggaacccaaaggggaggatgtgcaccaacagggtttttaaattgctac
agggatgcgaaaggatatacagatttgttacaacatgattgtcagtttcc
tacaaaatatactcttatcacatgacccagcaattttactccttcatagt
tacctatgaggtagaaattatattcacacaaacacctgaactcagtagtg
aggttctttagcagatgaataaactgtggttacagtcagataacgaaata
ttgaactgttgagcataaagagacagacacagggagccttagatgcacac
gcagttaagaagccttacttcaaaaggctatatactgtatgattctaact
atgtgatattctaggaataacagtgacggaaggccatacaatgatcagcg
atcagaggttgctaggatttgtcacggacaaggaatgaaaactcagagca
cagactactgatagaacagtgggatcattctgacagtatagcatgggcac
atgccatcccacattgaaatccttagaatgtcagccttaatgcaaacagt
gtccttcagatgagggtgtgtccgtgtgtgaccttctgggggatcctgag
catgaacaagaacatgcagggcataggtcatataggaaatatctgtatct
ttctcccaaattttgcagtgaacctgaacttgttaaaaatacattttaaa
atacatccacgctccattttcttagaaaatgtactacaaacaatttaaag
ctatgcctgactagtttattaagtaaatgaagatttggattatggctatt
ttattattggctttgacatactggagagtcaccctaataccctagtgatt
cttccaactatagaactgctacttccatggtatacccaaatctgttcctg
aacaatgttcaatgatcctccttatgagctcctccttcaggtctcctacc
tacttcctcaacaggttcatctaatctaattggaact
gaattcatatatgcatagcctctggtgacagtctgtggaagagagaggct
cccttccagcctctggtgacagtctgtgggagagagagactccctcctgt
cttgtcctagtgtggagacacagactggtatccccatgtagccattagtg
ctgctcttgtgggagctgggcaaggtgaagactggattcctgacgctcag
gatcatgctttagcagcgattttagggctttgagagacttgtccttgttc
ctctggattacgaagatggtcttcgatcaggaaagggaagtggacatctg
ggttttgtgtatgttagaatgtcaatagactatccatctgagaatttgat
tgaagtcccaaatctcagattatggaataaatactcaaagacaagatgca
attatatccagtgccatcttgccaaatcagatcataaatctggtttgact
actagtgacctttctcacatgcaatttatgaaaaaaaattgacagaattg
tttttttttttttcttggaagaaatccatatggacagacaattctggatt
tctgtcaggctgttcccaacagctcttccctcctccactaagctgaagcc
cctttgcaggccctcatagagattggcttctcccttcatctggaacatga
acagagaggtcagaggtcttgggaatgtttatgtattcctaggagttcgc
actagaaattgtcacttattgaatgtggggggacagctcctgtaatcctg
gcacttggttgttgttatagtcaaagcctggtctctttgcaggcctagca
aggctaggctctatcactgccttttgttacttttctattgctgtgaagaa
gtgaaatgtccaagtcaagtatatttattttgctttatggtttcagaagg
ttggagttcatgattttggctatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74223291_74224213
seq2: B6Ng01-082G01.g_68_993

seq1  GAATTCATATATGCATAGCCTCTGGTGACAGTCTGTGGAAGAGAGAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATATGCATAGCCTCTGGTGACAGTCTGTGGAAGAGAGAGGCT  50

seq1  CCCTTCCAGCCTCTGGTGACAGTCTGTGGGAGAGAGAGACTCCCTCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCAGCCTCTGGTGACAGTCTGTGGGAGAGAGAGACTCCCTCCTGT  100

seq1  CTTGTCCTAGTGTGGAGACACAGACTGGTATCCCCATGTAGCCATTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTAGTGTGGAGACACAGACTGGTATCCCCATGTAGCCATTAGTG  150

seq1  CTGCTCTTGTGGGAGCTGGGCAAGGTGAAGACTGGATTCCTGACGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTGTGGGAGCTGGGCAAGGTGAAGACTGGATTCCTGACGCTCAG  200

seq1  GATCATGCTTTAGCAGCGATTTTAGGGCTTTGAGAGACTTGTCCTTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGCTTTAGCAGCGATTTTAGGGCTTTGAGAGACTTGTCCTTGTTC  250

seq1  CTCTGGATTACGAAGATGGTCTTCGATCAGGAAAGGGAAGTGGACATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATTACGAAGATGGTCTTCGATCAGGAAAGGGAAGTGGACATCTG  300

seq1  GGTTTTGTGTATGTTAGAATGTCAATAGACTATCCATCTGAGAATTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTGTATGTTAGAATGTCAATAGACTATCCATCTGAGAATTTGAT  350

seq1  TGAAGTCCCAAATCTCAGATTATGGAATAAATACTCAAAGACAAGATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCCAAATCTCAGATTATGGAATAAATACTCAAAGACAAGATGCA  400

seq1  ATTATATCCAGTGCCATCTTGCCAAATCAGATCATAAATCTGGTTTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCCAGTGCCATCTTGCCAAATCAGATCATAAATCTGGTTTGACT  450

seq1  ACTAGTGACCTTTCTCACATGCAATTTATGAAAAAAAATTGACAGAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGACCTTTCTCACATGCAATTTATGAAAAAAAATTGACAGAATTG  500

seq1  TTTTTTTTTTTTTCTTGGAAGAAATCCATATGGACAGACAATTCTGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCTTGGAAGAAATCCATATGGACAGACAATTCTGGATT  550

seq1  TCTGTCAGGCTGTTCCCAACAGCTCTTCCCTCCTCCACTAAGCTGAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGCTGTTCCCAACAGCTCTTCCCTCCTCCACTAAGCTGAAGCC  600

seq1  CCTTTGCAGGCCCTCATAGAGATTGGCTTCTCCCTTCATCTGGAACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAGGCCCTCATAGAGATTGGCTTCTCCCTTCATCTGGAACATGA  650

seq1  ACAGAGAGGTCAGAGGTCTTGGGAATGTTTATGTATTCCTAGGAGTTCGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGGTCAGAGGTCTTGGGAATGTTTATGTATTCCTAGGAGTTCGC  700

seq1  ACTAG-AATTGTCACTTATTGAATGTGGGGGGACAGCTCCTGTAATCCTG  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAATTGTCACTTATTGAATGTGGGGGGACAGCTCCTGTAATCCTG  750

seq1  GCACTTGGTTGTTGTTATAGTCAAAGCCTGGTCTC-TTGCAGGCCTAGCA  798
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCACTTGGTTGTTGTTATAGTCAAAGCCTGGTCTCTTTGCAGGCCTAGCA  800

seq1  A-GCTAGGCTCTATCACTGCC-TTTGTTACTTTTCTATTGCTGTGAAGAA  846
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGCTAGGCTCTATCACTGCCTTTTGTTACTTTTCTATTGCTGTGAAGAA  850

seq1  GTGAAATGTCCAAGTCAAGTTATAATTAATTTTGC-TTATGGTTTCAGAA  895
      ||||||||||||||||||| ||| ||| ||||||| ||||||||||||||
seq2  GTGAAATGTCCAAGTCAAG-TAT-ATTTATTTTGCTTTATGGTTTCAGAA  898

seq1  GGTTGGAGTCCATGATTTTGGCTATCAG  923
      ||||||||| ||||||||||||||||||
seq2  GGTTGGAGTTCATGATTTTGGCTATCAG  926