BAC Information

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BAC

Clone NameB6Ng01-082I07
Chromosome14 (Build37)
Map Location 84,011,806 - 84,012,913
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773
Downstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082I07.bB6Ng01-082I07.g
ACCDH897048DH897049
length1,1011,232
definitionDH897048|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I07, 5' end.DH897049|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagattggtctttagaatacatctttaattcctaaaattgaggca
agaaatgtttatagaaggaggtagccatgttagaaatctatgtctaattg
aagtccagagtaagtgatgaatcagagaaagatttaacaaaatgcgtcag
ggataggatatgctcaattattttaaagacagaacatggaagagaggcta
cttacaaacaaagagcgagtgagcgagcgagagagagagcaagagagagg
agatagtgtgtggtgtgtggcaagttttactggtatagctttacagaaac
agtttttagagagaacaagaagacagaacagaccacagaatgagaaggac
cagaaaactagaacatattgtcaaagaggccaggcagagcaattcagtca
tactgaaagccatggctcattaaaaataatttatatatcaatagttgatt
aattattagttttaattaattattacaataaattaaaattaattaattga
tatggttccagataaggggagttcatttgaaaacagttgatcagaaaaac
ctcagagactctgtaataaatacagtttttttttcagtcctattggttcc
tctctaaaattggttcataaaatactgctattgaagacactacccatctt
tgttttacggcaaagaaatgaaattcaaattgaattggaagcttccttca
agctttctagcttaaaatgtgcaaggtattggaagatatcagccttctgc
aacattgttcttctctgaatgtttaaactataaagccccaaactcttttt
taaacagtatcaatcagcaacataaatgttttcaatgaatatgttctaga
atatcagaattttatcctatcctgagcaactaaatcctaaaagagatcag
caaagtttcagcacgacaaatttgaccatattggcctaattacagctttt
gacacctcatgtcccatctctactgacacatttccttaaacaagacttcc
ttactccaatgagtggtcatacctcctatcttcctatccatcagatagtg
cactccctaaatactagcgtttaaacatataagctttgggtctattatta
t
gaattctttatatatgttggatattagtcccctatctgaattaggatagg
taaagacccttttccaatctgttggtggttttttgtcttattgacggtgt
cttttgccttgcagaaactttggagtttcattaggtcccatttgtcaatt
ctcgatcttacagcacaagccattgctgttctgttcaggcaatttttcct
ctgtgcccatatcttcaaggcttttccccactttctcctctataagtttc
agtgtctctggttttatgtgaagttccttgatccacttagatttgacctt
agtacaaggagataagtatggatcgattcgcattcttctacatgataaca
accagttgtgtcagcaccaattgttgaaaatgctgtcttttttccactgg
atggttttagctcccttgtcgaagatcaagtgaccatagttgtgtgggtt
catttctgggtcttcaattctattccattggtctacttgtctgtctctat
accagtaccatgcaatttttatcacaattgctctgtagtaaagctttagg
tcaggcatggtgattccacctgaggttcttttatccttgagaagactttt
tgctatcctaggtttgttgttattccagatgaatttgcaaattgctcctt
ctaattcgttgaagaattgagttggaaatttgatggggattgcattgaat
ctatagattgcttttggcaagatagccatttttacaatgttgatcctgcc
aatccatgagcatgggagatctttccatcttctgagatcttctttaattt
ctttcttcagagacttgaagttttgatcatacagatctttcacttcctta
gttagagtcacgccgagatatttaatattatttgtgactattgagaaggg
tgttgtttccctaatttctttctgagcctgtttattctttatgtagagaa
aggccattgacttgtttgaattattttatatccagctacttcaccgagct
gtttatcaggttaggagttcctctggtggaattttagggtcacttataat
aactatcatatcatctgcaaagggatatttgactccttttcactggtatc
cccttgatccctttgttgccgattgcctggctaaacttcagacatagttg
gaaaggaaggtgatggcagctgcatcgataaggatgctcacgctccactt
acctgagatgggctacgtttgctagtaatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84011806_84012913
seq2: B6Ng01-082I07.b_51_1150

seq1  AATTCAGATTGGTCTTTAGAATACATCTTTAATTCCTAAAATTGAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGATTGGTCTTTAGAATACATCTTTAATTCCTAAAATTGAGGCAA  50

seq1  GAAATGTTTATAGAAGGAGGTAGCCATGTTAGAAATCTATGTCTAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTTATAGAAGGAGGTAGCCATGTTAGAAATCTATGTCTAATTGA  100

seq1  AGTCCAGAGTAAGTGATGAATCAGAGAAAGATTTAACAAAATGCGTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGAGTAAGTGATGAATCAGAGAAAGATTTAACAAAATGCGTCAGG  150

seq1  GATAGGATATGCTCAATTATTTTAAAGACAGAACATGGAAGAGAGGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGATATGCTCAATTATTTTAAAGACAGAACATGGAAGAGAGGCTAC  200

seq1  TTACAAACAAAGAGCGAGTGAGCGAGCGAGAGAGAGAGCAAGAGAGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACAAAGAGCGAGTGAGCGAGCGAGAGAGAGAGCAAGAGAGAGGA  250

seq1  GATAGTGTGTGGTGTGTGGCAAGTTTTACTGGTATAGCTTTACAGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGTGTGGTGTGTGGCAAGTTTTACTGGTATAGCTTTACAGAAACA  300

seq1  GTTTTTAGAGAGAACAAGAAGACAGAACAGACCACAGAATGAGAAGGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGAGAGAACAAGAAGACAGAACAGACCACAGAATGAGAAGGACC  350

seq1  AGAAAACTAGAACATATTGTCAAAGAGGCCAGGCAGAGCAATTCAGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTAGAACATATTGTCAAAGAGGCCAGGCAGAGCAATTCAGTCAT  400

seq1  ACTGAAAGCCATGGCTCATTAAAAATAATTTATATATCAATAGTTGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAGCCATGGCTCATTAAAAATAATTTATATATCAATAGTTGATTA  450

seq1  ATTATTAGTTTTAATTAATTATTACAATAAATTAAAATTAATTAATTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGTTTTAATTAATTATTACAATAAATTAAAATTAATTAATTGAT  500

seq1  ATGGTTCCAGATAAGGGGAGTTCATTTGAAAACAGTTGATCAGAAAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCAGATAAGGGGAGTTCATTTGAAAACAGTTGATCAGAAAAACC  550

seq1  TCAGAGACTCTGTAATAAATACAGTTTTTTTTTCAGTCCTATTGGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACTCTGTAATAAATACAGTTTTTTTTTCAGTCCTATTGGTTCCT  600

seq1  CTCTAAAATTGGTTCATAAAATACTGCTATTGAAGACACTACCCATCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAATTGGTTCATAAAATACTGCTATTGAAGACACTACCCATCTTT  650

seq1  GTTTTACGGCAAAGAAATGAAATTCAAATTGAATTGGAAGCTTCCTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACGGCAAAGAAATGAAATTCAAATTGAATTGGAAGCTTCCTTCAA  700

seq1  GCTTTCTAGCTTAAAATGTGCAAGGTATTGGAAGATATCAGCCTTCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTAGCTTAAAATGTGCAAGGTATTGGAAGATATCAGCCTTCTGCA  750

seq1  ACATTGTTCTTCTCTGAATGTTTAAACTATAAAGCCCCAAACTCTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTCTTCTCTGAATGTTTAAACTATAAAGCCCCAAACTCTTTTTT  800

seq1  AAACAGTATCAATCAGCAACATAAATGTTTTCAATGAATATGTTCTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTATCAATCAGCAACATAAATGTTTTCAATGAATATGTTCTAGAA  850

seq1  TATCAGAATTTTATCCTATCCTGAGCAACTAAATCCTAAAAGAGATCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAATTTTATCCTATCCTGAGCAACTAAATCCTAAAAGAGATCAGC  900

seq1  AAAGTTTCAGCAGGACAAATTTGACCATATTGGCCTAATTACAGCTTTTG  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCAGCACGACAAATTTGACCATATTGGCCTAATTACAGCTTTTG  950

seq1  ACACCTCATGTCCCATCTCTACTGACACATTTCCTTAAACAAGGACTTCC  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACACCTCATGTCCCATCTCTACTGACACATTTCCTTAAACAA-GACTTCC  999

seq1  TTACTCCAAATGAGTGGTCATACCTCCTAATCTTCCTAATCCATTCAGAT  1050
      ||||||| |||||||||||||||||||| |||||||| ||||| ||||||
seq2  TTACTCC-AATGAGTGGTCATACCTCCT-ATCTTCCT-ATCCA-TCAGAT  1045

seq1  AGTGCACTCCCTAAATACTAAGCGTTTAAACATATAAGCTTTTGGGGTCT  1100
      ||||||||||||||||||| ||||||||||||||||||||||  ||||||
seq2  AGTGCACTCCCTAAATACT-AGCGTTTAAACATATAAGCTTT--GGGTCT  1092

seq1  ATTATTAT  1108
      ||||||||
seq2  ATTATTAT  1100