BAC Information

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BAC

Clone NameB6Ng01-083D20
Chromosome14 (Build37)
Map Location 114,023,007 - 114,153,461
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083D20.bB6Ng01-083D20.g
ACCDH897558DH897559
length1,2291,133
definitionDH897558|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D20, 5' end.DH897559|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,023,007 - 114,024,235)(114,152,341 - 114,153,461)
sequence
gaattcagtcagagactcaagtttttctaattactgaaacccatgaaaaa
cttatatgacatgacaaagggagaagaaatgttggttgatgatggaatta
agtatgctaataaacagatattaaaacaaaatattgtttttaatacattc
catctaatcagacttttttttttaatgtagaagagtcagtataagagata
aggagagtgtggccataagctcataaacatttataggttaatactgtcat
taagagtggagtgttgagctggagaggaggctcagcaattaagagcactg
actgctattctggagatcctgagtccaattgcagcaaccacgtggtggct
cacaaccatctgtaatgggattagatgccctctcctgatatgtctgaaga
cagtgacaatgaactcatataaataaaccaaataaataattcttaaacaa
aaataactcaaggtgacaaagaaactattctgttctaaaattgaactgta
tcagtcactaattttactttacagtatctattttagaatttctattccta
gacatctaatattttaaaaaatatcttgattgtttagccattcaagtatg
gtagttctcataacaacagtacttttccacctcagtggctacttgagtcc
ttatctctgtggtagccatatattttccttaacaaataacaaaaatactc
aacccatagggcaaaaggtttatcttgtcttccagggttcctgtcttttc
tctcccacttcctgatccattggtttgaggctgttggcagagcagttcac
catgtgggggacatgaaaaacaggaacattttttctttaatgagatggta
taaaagataggtgcagagaaagggttcaccatctctctattccttcaagg
ctacattgccagaaatacaatgctcttccaggccgtatctagtaaagttt
ctacaatctcccactagggctccttactagaaaattacactttaatgcat
gacagcttctcatttatattttgtagatcagatgaggtgtcctagactat
ataatattcttaccaaaattcattttatgtgttttcatttttcggtattt
agctttctataattcattaagttcaagactacgcctaattaactcaaatt
taactcctcttctgaatacaagggcataaggacaatcactatagccttct
tcctggaattgttgaaagatctttggttt
gaattccatgatcgtgggcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccctgaatggtggttttagcagaggctttatgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtttttcattgtcttactaaaaactcta
tttggaagagtaaattatatttaagtgtacataatataatgattaccagt
tgaaaagttatattcttaattactaacaatgagcaagttcattgtgttat
gatataaataactcaatgattctcagaatttaagatatttcagaaacgtc
attcttcaaacaaatagattgctactacctttagattgttatagcttaca
aatataaattataaatctgttaataaaaaatttaacaatgtagaggttaa
acgaatatattctatattttagaataagatgttttatgttgagccttaaa
gttcagaagaatgtttatcattgtaaggtaaatatgactgcagtgaattt
tatttctacttattggttaatttatatatgcaaatatatttttatttctt
tttattaatcattttattcattaacatttcaaataatacccctcttccca
gtttccccttcacaaccctctccccattccatctctcctcctctttcctc
ctatgacagtgctcctctaccgactcactcacttctgcctcagcactcta
ccatcaccattggccggactatcaagactctacagggccaaggacctcct
ttcccattgattccagataaagccatcttctgctgcatatgtagctggag
ccatgaatgcctcctatatactctttggttggtggtttgtccctagagtt
tggatggtctgattagtgaatattgttctactatgggttgtatcaacttc
agctcctttagtccttcccctcactctttcattacagtcccaggcctcag
ttcattagttgctgtgaataacttgcatctgtatagtaaggtgctggtga
cctctcaggagacagcccataccaggttcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114023007_114024235
seq2: B6Ng01-083D20.b_42_1270

seq1  GAATTCAGTCAGAGACTCAAGTTTTTCTAATTACTGAAACCCATGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGAGACTCAAGTTTTTCTAATTACTGAAACCCATGAAAAA  50

seq1  CTTATATGACATGACAAAGGGAGAAGAAATGTTGGTTGATGATGGAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGACATGACAAAGGGAGAAGAAATGTTGGTTGATGATGGAATTA  100

seq1  AGTATGCTAATAAACAGATATTAAAACAAAATATTGTTTTTAATACATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTAATAAACAGATATTAAAACAAAATATTGTTTTTAATACATTC  150

seq1  CATCTAATCAGACTTTTTTTTTTAATGTAGAAGAGTCAGTATAAGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATCAGACTTTTTTTTTTAATGTAGAAGAGTCAGTATAAGAGATA  200

seq1  AGGAGAGTGTGGCCATAAGCTCATAAACATTTATAGGTTAATACTGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTGTGGCCATAAGCTCATAAACATTTATAGGTTAATACTGTCAT  250

seq1  TAAGAGTGGAGTGTTGAGCTGGAGAGGAGGCTCAGCAATTAAGAGCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTGGAGTGTTGAGCTGGAGAGGAGGCTCAGCAATTAAGAGCACTG  300

seq1  ACTGCTATTCTGGAGATCCTGAGTCCAATTGCAGCAACCACGTGGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATTCTGGAGATCCTGAGTCCAATTGCAGCAACCACGTGGTGGCT  350

seq1  CACAACCATCTGTAATGGGATTAGATGCCCTCTCCTGATATGTCTGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCATCTGTAATGGGATTAGATGCCCTCTCCTGATATGTCTGAAGA  400

seq1  CAGTGACAATGAACTCATATAAATAAACCAAATAAATAATTCTTAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACAATGAACTCATATAAATAAACCAAATAAATAATTCTTAAACAA  450

seq1  AAATAACTCAAGGTGACAAAGAAACTATTCTGTTCTAAAATTGAACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCAAGGTGACAAAGAAACTATTCTGTTCTAAAATTGAACTGTA  500

seq1  TCAGTCACTAATTTTACTTTACAGTATCTATTTTAGAATTTCTATTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACTAATTTTACTTTACAGTATCTATTTTAGAATTTCTATTCCTA  550

seq1  GACATCTAATATTTTAAAAAATATCTTGATTGTTTAGCCATTCAAGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTAATATTTTAAAAAATATCTTGATTGTTTAGCCATTCAAGTATG  600

seq1  GTAGTTCTCATAACAACAGTACTTTTCCACCTCAGTGGCTACTTGAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTCATAACAACAGTACTTTTCCACCTCAGTGGCTACTTGAGTCC  650

seq1  TTATCTCTGTGGTAGCCATATATTTTCCTTAACAAATAACAAAAATACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGTGGTAGCCATATATTTTCCTTAACAAATAACAAAAATACTC  700

seq1  AACCCATAGGGCAAAAGGTTTATCTTGTCTTCCAGGGTTCCTGTCTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATAGGGCAAAAGGTTTATCTTGTCTTCCAGGGTTCCTGTCTTTTC  750

seq1  TCTCCCACTTCCTGATCCATTGGTTTGAGGCTGTTGGCAGAGCAGTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCACTTCCTGATCCATTGGTTTGAGGCTGTTGGCAGAGCAGTTCAC  800

seq1  CATGTGGGGGACATGAAAAACAGGAACATTTTTTCTTTAATGAGATGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGGGACATGAAAAACAGGAACATTTTTTCTTTAATGAGATGGTA  850

seq1  TAAAAGATAGGTGCAGAG-AAGGGTTCACCATCTCTCTATTCCCTTCAAG  899
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  TAAAAGATAGGTGCAGAGAAAGGGTTCACCATCTCTCTATT-CCTTCAAG  899

seq1  GCTACATTGCCAGAAATACAATGCTCTTCCAGGCCGTATCTAGTAAAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATTGCCAGAAATACAATGCTCTTCCAGGCCGTATCTAGTAAAGTT  949

seq1  TCTACAATCTCCCACTAGGGCTCCTTACTAGAAAATTACACTTTAATGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATCTCCCACTAGGGCTCCTTACTAGAAAATTACACTTTAATGCA  999

seq1  TGACAAGCTTCTCATTTATA-TTTGTAGATCAGATGAGGTGTCCTAGACT  1048
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGAC-AGCTTCTCATTTATATTTTGTAGATCAGATGAGGTGTCCTAGACT  1048

seq1  ATAT-ATATTCCTTACCAAAATTCATTTTATGTGTTTTCATTTTTTCGGT  1097
      |||| ||||| ||||||||||||||||||||||||||||| |||||||||
seq2  ATATAATATT-CTTACCAAAATTCATTTTATGTGTTTTCA-TTTTTCGGT  1096

seq1  ATTTTAGCTTTCTATAATCCATT-AGTTCAAAGACTACG-CTAATATACT  1145
      | |||||||||||||||| |||| ||||| ||||||||| |||||  |||
seq2  A-TTTAGCTTTCTATAATTCATTAAGTTC-AAGACTACGCCTAATTAACT  1144

seq1  C-AATTTTACTCCTC-TCTGAATACAA-GGCATAGAGACAATCTACTTAT  1192
      | ||||| ||||||| ||||||||||| ||||||  ||||||| || |||
seq2  CAAATTTAACTCCTCTTCTGAATACAAGGGCATAAGGACAATC-AC-TAT  1192

seq1  TAGCTTCTTCCT-GATTTGTTTGAAAAGATC-TTGGTTT  1229
         ||||||||| || |||||   ||||||| |||||||
seq2  AGCCTTCTTCCTGGAATTGTT--GAAAGATCTTTGGTTT  1229

seq1: chr14_114152341_114153461
seq2: B6Ng01-083D20.g_87_1200 (reverse)

seq1  AGAGGAGCCTGGTAT-GGCTGTCTCCTGAGAGGTTCTACCAGCACC-TAC  48
      |||||| |||||||| ||||||||||||||||||   ||||||||| |||
seq2  AGAGGAACCTGGTATGGGCTGTCTCCTGAGAGGT--CACCAGCACCTTAC  48

seq1  TAATACAGATGCAAG-TATTCACAGCCAACTAATGGACTGA-GCCTGGGA  96
      | ||||||||||||| ||||||||| ||||||||| ||||| ||||||| 
seq2  T-ATACAGATGCAAGTTATTCACAG-CAACTAATGAACTGAGGCCTGGG-  95

seq1  ACTGTAATGAAAGAGTGAGGGGAAGGACTAAAGGAGCTGAAGGTGATTAC  146
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  ACTGTAATGAAAGAGTGAGGGGAAGGACTAAAGGAGCTGAAGTTGA-TAC  144

seq1  AACCCCATAGTAAGAACAATATCAACTAATCAGACCATCCAAACTCTTAG  196
      || |||||||| ||||||||||  |||||||||||||||||||||| |||
seq2  AA-CCCATAGT-AGAACAATATTCACTAATCAGACCATCCAAACTC-TAG  191

seq1  GGACAAAACCACCAACCAAAGAGTATATAAGGAGGCATTCATGGCTCCAG  246
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGAC-AAACCACCAACCAAAGAGTATAT-AGGAGGCATTCATGGCTCCAG  239

seq1  CTACATATGCAGCAGAAGATGGCTTTATCTGGAATCAATGGGAAAGGAGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATGCAGCAGAAGATGGCTTTATCTGGAATCAATGGGAAAGGAGG  289

seq1  TCCTTGGCCCTGTAGAGTCTTGATAGTCCGGCCAATGGTGATGGTAGAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGCCCTGTAGAGTCTTGATAGTCCGGCCAATGGTGATGGTAGAGT  339

seq1  GCTGAGGCAGAAGTGAGTGAGTCGGTAGAGGAGCACTGTCATAGGAGGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCAGAAGTGAGTGAGTCGGTAGAGGAGCACTGTCATAGGAGGAA  389

seq1  AGAGGAGGAGAGATGGAATGGGGAGAGGGTTGTGAAGGGGAAACTGGGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAGAGATGGAATGGGGAGAGGGTTGTGAAGGGGAAACTGGGAA  439

seq1  GAGGGGTATTATTTGAAATGTTAATGAATAAAATGATTAATAAAAAGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTATTATTTGAAATGTTAATGAATAAAATGATTAATAAAAAGAAA  489

seq1  TAAAAATATATTTGCATATATAAATTAACCAATAAGTAGAAATAAAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATATTTGCATATATAAATTAACCAATAAGTAGAAATAAAATTC  539

seq1  ACTGCAGTCATATTTACCTTACAATGATAAACATTCTTCTGAACTTTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTCATATTTACCTTACAATGATAAACATTCTTCTGAACTTTAAG  589

seq1  GCTCAACATAAAACATCTTATTCTAAAATATAGAATATATTCGTTTAACC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACATAAAACATCTTATTCTAAAATATAGAATATATTCGTTTAACC  639

seq1  TCTACATTGTTAAATTTTTTATTAACAGATTTATAATTTATATTTGTAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTGTTAAATTTTTTATTAACAGATTTATAATTTATATTTGTAAG  689

seq1  CTATAACAATCTAAAGGTAGTAGCAATCTATTTGTTTGAAGAATGACGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACAATCTAAAGGTAGTAGCAATCTATTTGTTTGAAGAATGACGTT  739

seq1  TCTGAAATATCTTAAATTCTGAGAATCATTGAGTTATTTATATCATAACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATATCTTAAATTCTGAGAATCATTGAGTTATTTATATCATAACA  789

seq1  CAATGAACTTGCTCATTGTTAGTAATTAAGAATATAACTTTTCAACTGGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACTTGCTCATTGTTAGTAATTAAGAATATAACTTTTCAACTGGT  839

seq1  AATCATTATATTATGTACACTTAAATATAATTTACTCTTCCAAATAGAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTATATTATGTACACTTAAATATAATTTACTCTTCCAAATAGAGT  889

seq1  TTTTAGTAAGACAATGAAAAACTTCCTTCATGGAAAGGACAGCGTTTTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTAAGACAATGAAAAACTTCCTTCATGGAAAGGACAGCGTTTTGT  939

seq1  TCTTACTGGAGTAGATACTTATTCTGGTTATGGATTTGCCTTTCCTGCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTGGAGTAGATACTTATTCTGGTTATGGATTTGCCTTTCCTGCAC  989

seq1  ATAAAGCCTCTGCTAAAACCACCATTCAGGGACTGACAGAATGCCTCATC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCTCTGCTAAAACCACCATTCAGGGACTGACAGAATGCCTCATC  1039

seq1  TATCGTCATGGTATTCCACACAGTATTGCTTCTGACCAAGGAACTCATTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTCATGGTATTCCACACAGTATTGCTTCTGACCAAGGAACTCATTT  1089

seq1  CACAGCCAGAGAAGTACGACAGTGG  1121
      |||||||||||||||||||||||||
seq2  CACAGCCAGAGAAGTACGACAGTGG  1114