BAC Information

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BAC

Clone NameB6Ng01-083N16
Chromosome14 (Build37)
Map Location 121,504,450 - 121,693,177
singlet/doubletdoublet
Overlap geneFarp1, LOC100043837, Stk24
Upstream geneLOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
Downstream geneSlc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083N16.bB6Ng01-083N16.g
ACCDH897999DH898000
length161562
definitionDH897999|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N16, 5' end.DH898000|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,504,450 - 121,504,610)(121,692,610 - 121,693,177)
sequence
accaaggccatctgaccttggaagtgtccctctctcccaccagggcaggt
tggggtatcctgtgtgatcgtgttcccattgctcacaagcatttgtcctg
cagatgagtaaggcatgaagccatgagtctctgcgactttctttgggggg
tggggggtggg
cagaagtagctgttggatttactcaagataccctgatttttactggggca
gtttttattgcaggcccttaaagaccagtatgttccttttggtactgaat
atagacttcatgtggatgcggtgggtttccactacgattagtttgtcatt
gtccatctgtgtagcctcatgggcctgaggagctcatcggttcagagagt
gggagttgggcctttcactgtggccatacggagtacctggcttcagcttt
ctagggtttcctacctgcagagcattatgtgtccgtgcctaaggagttca
ctcctggtgccatgcactgggctcatgggtggagcccctttgtagagtct
tccctcagagatcatgaacagaagttgtttcctcaggggagagaatccag
tcatccttggtagaattgttgcctgtttctaacgactcctttctcttttc
cttccctaagatgaaagatatcccaaagaggcctttctctcagtgtttat
ccacaatcatttctcctctgtttgcggaggtaagatccctggctgttatt
cttgggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121504450_121504610
seq2: B6Ng01-083N16.b_56_216

seq1  ACCAAGGCCATCTGACCTTGGAAGTGTCCCTCTCTCCCACCAGGGCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCCATCTGACCTTGGAAGTGTCCCTCTCTCCCACCAGGGCAGGT  50

seq1  TGGGGTATCCTGTGTGATCGTGTTCCCATTGCTCACAAGCATTTGTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTATCCTGTGTGATCGTGTTCCCATTGCTCACAAGCATTTGTCCTG  100

seq1  CAGATGAGTAAGGCATGAAGCCATGAGTCTCTGCGACTTTCTTTGGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGTAAGGCATGAAGCCATGAGTCTCTGCGACTTTCTTTGGGGGG  150

seq1  TGGGGGGTGGG  161
      |||||||||||
seq2  TGGGGGGTGGG  161

seq1: chr14_121692610_121693177
seq2: B6Ng01-083N16.g_69_636 (reverse)

seq1  TCCCCTCCCAAGAATAACAGCCAGGGATCTTACCTCCGCAAACAGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCCAAGAATAACAGCCAGGGATCTTACCTCCGCAAACAGAGGAG  50

seq1  AAATGATTGTGGATAAACACTGAGAGAAAGGCCTCTTTGGGATATCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTGTGGATAAACACTGAGAGAAAGGCCTCTTTGGGATATCTTTC  100

seq1  ATCTTAGGGAAGGAAAAGAGAAAGGAGTCGTTAGAAACAGGCAACAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGGAAGGAAAAGAGAAAGGAGTCGTTAGAAACAGGCAACAATTC  150

seq1  TACCAAGGATGACTGGATTCTCTCCCCTGAGGAAACAACTTCTGTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGGATGACTGGATTCTCTCCCCTGAGGAAACAACTTCTGTTCATG  200

seq1  ATCTCTGAGGGAAGACTCTACAAAGGGGCTCCACCCATGAGCCCAGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAGGGAAGACTCTACAAAGGGGCTCCACCCATGAGCCCAGTGCA  250

seq1  TGGCACCAGGAGTGAACTCCTTAGGCACGGACACATAATGCTCTGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCAGGAGTGAACTCCTTAGGCACGGACACATAATGCTCTGCAGGT  300

seq1  AGGAAACCCTAGAAAGCTGAAGCCAGGTACTCCGTATGGCCACAGTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCCTAGAAAGCTGAAGCCAGGTACTCCGTATGGCCACAGTGAAA  350

seq1  GGCCCAACTCCCACTCTCTGAACCGATGAGCTCCTCAGGCCCATGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAACTCCCACTCTCTGAACCGATGAGCTCCTCAGGCCCATGAGGCT  400

seq1  ACACAGATGGACAATGACAAACTAATCGTAGTGGAAACCCACCGCATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATGGACAATGACAAACTAATCGTAGTGGAAACCCACCGCATCCA  450

seq1  CATGAAGTCTATATTCAGTACCAAAAGGAACATACTGGTCTTTAAGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTCTATATTCAGTACCAAAAGGAACATACTGGTCTTTAAGGGCC  500

seq1  TGCAATAAAAACTGCCCCAGTAAAAATCAGGGTATCTTGAGTAAATCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAAAACTGCCCCAGTAAAAATCAGGGTATCTTGAGTAAATCCAA  550

seq1  CAGCTACTTCTGGAATTC  568
      ||||||||||||||||||
seq2  CAGCTACTTCTGGAATTC  568