BAC Information

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BAC

Clone NameB6Ng01-084M18
Chromosome14 (Build37)
Map Location 9,240,844 - 9,241,913
singlet/doubletsinglet
Overlap geneLOC667005
Upstream geneLOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1
Downstream gene4930452B06Rik, LOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084M18.bB6Ng01-084M18.g
ACCDH898644DH898645
length1,2561,065
definitionDH898644|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M18, 5' end.DH898645|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaatcttttcaagacttttatcatgaatgggtgttggattttg
tcaaaagctttctccgcatctaacaagatgatcatgtggtttttgccttt
gtgtttgtttatataatggattacgttgatggatttccatatatcaaacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcagtttctgagaattttattgagtatttttgc
atcgatattcctaagggaaattggtctgaagttctgaatctttgttggat
ctttctgtggtttaggtatcagtgtaaatgtggcttcatagaatgaattc
ggtagaataccttctgtttctattttgtggaatagtttctgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacctgtctg
gtcctaggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatcgttaacttgatcctgatttaactt
tggtacctggtatctgtctagaaacttgtccatttcatccaggttttcca
gtttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggatgctgtccctgtgccctctagttgagtctggctaagggtttatc
tatcttgttgattttctcaaagaaacagctcgtggttaggttgattcttt
gaatagttcttcttgtttccacttggttgatttagccccttgagtttgat
tatttcctgctgtctatgcctctttgggttgaatttgcttcccttttgtt
ctagagctttaggtgtgtttgtcaagctgctagtgtgtgctctctctagt
ttctttttggaggcactcagaactatggagttttcctcttagaaatgctt
tcattgtgtcccataagtttgggtatgttgtggcttcatttattaactct
aaaagtcttaatttctttcttaatccattcttgactaatgtaacattgaa
aagaaatgtgtgtccagtttcaatgatagtttgcgttttatttctatgtt
tgcattgaaagacagccttaagtcatgtggatccgaatggagttatgaca
tatcataattttggtacttgaaggactgtttgtggtaccaatcattgggg
cacatt
gaattcttagcaggcatcaatattttatcagaagtttcaaaggcctaagt
aaaagtagtcaggcctgaaaggacgtcccaggttcttttagtcatcaata
tctctactcttggttccagaaattaccatccccttggtgttgcccatgca
caagataagcacccaggagagtgcataattttcttagtcacagagttcaa
cataatagaacacatactctgaattgctgaggggtgtgtcttgcatggca
tggtctcccttgataatcagagatgcctgatgattcctcagagcaaagtt
ttctgtttttttttttaaaaattaactcattgtatattgtgtaactgtgt
gtgtgtgtgtgtgtgtgtgcacctcatgtgtgcaggtatctgtggaggct
agaagagggcatcagatcttctgggactgtagtcataggcagatgtgatc
tgcctgatatagatgctggaaactgaacctgcatcctttgcaagaacagc
aagtgtggctgttagtgtttagctgtggatagccagaggttagggtgtct
tctcgaatcggggaacctctgctttcggaggagccatggtgctcagggtc
actaggaacacaaaaattaacacagaaaataaggccaaggtcagtatggc
aggcgccaagcgtgtgcctgtgacagttactgctgctgccaagcccgggg
ctgagaccgagaactgctcttggagacattggtaataaagtcagcgaaga
gctacaggcaagagtgcctctgaatagggaagcaaaaatgctaggtactg
gaaaaggtactgttaaagccctaccaaaccctgtagagaaggtgcctgtg
tgtgaactagaggtggaacttgctgagcctgagcctgaactctgaacttg
aacatgttatagagagaatgctttcttctgaacctatttttgttgatatc
cctctcagcccaatggaaacatctggatgtgcgctgcagatagtatctgt
gttaggctttctctgatttattctgcagtgtgtgagcagatgagggagct
gaccaaaccctctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9240844_9241913
seq2: B6Ng01-084M18.g_70_1134

seq1  GAATTCTTAGCAGGCATCAATATTTTATCAGAAGTTTCAAAGGCCTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAGGCATCAATATTTTATCAGAAGTTTCAAAGGCCTAAGT  50

seq1  AAAAGTAGTCAGGCCTGAAAGGACGTCCCAGGTTCTTTTAGTCATCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGTCAGGCCTGAAAGGACGTCCCAGGTTCTTTTAGTCATCAATA  100

seq1  TCTCTACTCTTGGTTCCAGAAATTACCATCCCCTTGGTGTTGCCCATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTCTTGGTTCCAGAAATTACCATCCCCTTGGTGTTGCCCATGCA  150

seq1  CAAGATAAGCACCCAGGAGAGTGCATAATTTTCTTAGTCACAGAGTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAAGCACCCAGGAGAGTGCATAATTTTCTTAGTCACAGAGTTCAA  200

seq1  CATAATAGAACACATACTCTGAATTGCTGAGGGGTGTGTCTTGCATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGAACACATACTCTGAATTGCTGAGGGGTGTGTCTTGCATGGCA  250

seq1  TGGTCTCCCTTGATAATCAGAGATGCCTGATGATTCCTCAGAGCAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCCTTGATAATCAGAGATGCCTGATGATTCCTCAGAGCAAAGTT  300

seq1  TTCTGTTTTTTTTTTTAAAAATTAACTCATTGTATATTGTGTAACTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTTTTTTTTAAAAATTAACTCATTGTATATTGTGTAACTGTGT  350

seq1  GTGTGTGTGTGTGTGTGTGCACCTCATGTGTGCAGGTATCTGTGGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGCACCTCATGTGTGCAGGTATCTGTGGAGGCT  400

seq1  AGAAGAGGGCATCAGATCTTCTGGGACTGTAGTCATAGGCAGATGTGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGCATCAGATCTTCTGGGACTGTAGTCATAGGCAGATGTGATC  450

seq1  TGCCTGATATAGATGCTGGAAACTGAACCTGCATCCTTTGCAAGAACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATATAGATGCTGGAAACTGAACCTGCATCCTTTGCAAGAACAGC  500

seq1  AAGTGTGGCTGTTAGTGTTTAGCTGTGGATAGCCAGAGGTTAGGGTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGCTGTTAGTGTTTAGCTGTGGATAGCCAGAGGTTAGGGTGTCT  550

seq1  TCTCGAATCGGGGAACCTCTGCTTTCGGAGGAGCCATGGTGCTCAGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAATCGGGGAACCTCTGCTTTCGGAGGAGCCATGGTGCTCAGGGTC  600

seq1  ACTAGGAACACAAAAATTAACACAGAAAATAAGGCCAAGGTCAGTATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAACACAAAAATTAACACAGAAAATAAGGCCAAGGTCAGTATGGC  650

seq1  AGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTGCCAAGCCC-GGG  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTGCCAAGCCCGGGG  700

seq1  CTGAGACCGAGAACTGCTCTTGGAGACATTGGTAATAAAGTCAGCGAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCGAGAACTGCTCTTGGAGACATTGGTAATAAAGTCAGCGAAGA  750

seq1  GCTACAGGCAAGAGTGCCTCTGAAAAGGGAAGCAAAAATGCTAGGTACTG  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTACAGGCAAGAGTGCCTCTGAATAGGGAAGCAAAAATGCTAGGTACTG  800

seq1  GAAAAGGTACTGTTAAAGCCCTACCAAAACCTGTAGAGAAGGTGCCTGTG  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAAAAGGTACTGTTAAAGCCCTACCAAACCCTGTAGAGAAGGTGCCTGTG  850

seq1  TGTGAACTAGAGGTGGAACTTGCTGAGCCTGAGCCTGAAC-CTGAACTTG  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTGAACTAGAGGTGGAACTTGCTGAGCCTGAGCCTGAACTCTGAACTTG  900

seq1  AACATGTTAGAGAAGAGAA-GCTTTCTCCTGAACCTATTTTGGTTGATAA  947
      ||||||||| || |||||| ||||||| ||||||||||||| |||||| |
seq2  AACATGTTATAG-AGAGAATGCTTTCTTCTGAACCTATTTTTGTTGAT-A  948

seq1  TCCCTCTCCAAGCCCAATGGAAACATCTGGATGTGCGCCTGCAGAAGAGT  997
      ||||||||  ||||||||||||||||||||||||||| |||||| | |||
seq2  TCCCTCTC--AGCCCAATGGAAACATCTGGATGTGCG-CTGCAG-ATAGT  994

seq1  ATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGAGCAGATG  1047
      |||||||| |||||||||||||| || ||  ||||||| |||||||||||
seq2  ATCTGTGTTAGGCTTTCTCTGATTTATTC--TGCAGTGTGTGAGCAGATG  1042

seq1  ATGGAGCTGACCCAAACCTCTGT  1070
      | |||||||||| || |||||||
seq2  AGGGAGCTGACCAAACCCTCTGT  1065