BAC Information

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BAC

Clone NameB6Ng01-084N07
Chromosome14 (Build37)
Map Location 51,380,916 - 51,381,264
singlet/doubletsinglet
Overlap genenone
Upstream gene3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749
Downstream geneTtc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084N07.bB6Ng01-084N07.g
ACCDH898669DH898670
length1,140957
definitionDH898669|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N07, 5' end.DH898670|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtatattttagatgttgggtctctataggatatgaggttgg
taaagatcttttcccagtctatgagttgccgttttgtcctattgacagtg
tcttttgccttacgaaagcttttaaactttatgagttcccatttatcaat
tgttaatcttagagtaaaagccactggcgttctgttgaggaaattttccc
ctgtactgatttgttcaaggctctttcccaatttttcttctatgagattc
agcatatctggttttatgtggaggtccttgatatacttggacttgagctt
tgtacaaggagataagaatgaatcaaattgcattgttctacgtgcagact
gccagctgaatcagcaccatttgatgaagatactgtcttgtttccactgg
atggttttagcttctttctcaaagataagtgaccataggtgtgtggaatg
attttctgggtcttcaattctagtccattgatctgcctgtctgtctatat
accaataccttgaggtttttatcactattgttgtatgatacagctttagg
tcagggatggttgttcccccagaagttcttttattgttgagaatagtttt
cgctatcttgggatttttgttatttcgaaggaatttgagaattgctcttt
ctaactgtatgaagaattgagttggaatttttatggggattgcatagaat
ctgtacattgctttcggtaaaatggccatttttactatattaatcctgcc
aatccatgagcatgggagatctttccatcttctgaggtcttctctgaggt
ctttcttcagaggcttgaagttcttgtcatacagatctttcacttgcttg
gttagagtcacacaagatgtttatattattgtgaaggctgttatttccct
atttttttaagcccatttatccttgagtagaggaaggctactaattgtta
ttttatgtctggccactttgctaaattgtttatcacctgtaggaactctc
tgtagatttttggagttgttatggataactatcatatcatctgcaatagt
gaattctgacttcttcattccgaatttatcccttgatactcttgatgctt
attgccttggctaaacttcaggactgtactgaattaatgg
gaattctttatttagctctgtaccccatttttaatagggttatttggttt
tctggagtacaacttcttgagttcctttatatatatttgatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtccttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattcttgatcttacaacacaagccattgctgttc
tgttcaggaatctttcccctgtgaccacatcttcgaggctctccccactt
tctcctctgtaggtttcagtctcactggttttatatggagttctttgatc
cactttgacttgagctttgtacaaggagataggaatgggtcaattcacac
tctactacatgctaacttcaagttgagccagcaccatttgttgaagatgc
tgtcttttttccactgggtggttttagctcctttgtcaaagaacaagtga
tcatagatgtgtgggttcacttctgggtcttcagttctgttccattgatc
tacctgcctgtcatttaccagtaccatgcagtttttattacaattgcttt
gtagtatagcttgaggtcagggatggtgattcccccagaggttcttttat
tgttgaaaacagtttttgctgtcctaggttttttgttattccagatgaat
ttacaaattgccctttctaactctgtgaagaattagcaaaggctcttaag
aacaaaaaatagtgttgttccgattacaaaactaagaagtttgtatgtgt
gtgcttgtaccctcatttgcttgaggttttcctagtagccactctttggc
tactttaaaatgcagcgaggggtttctggtgtttgaaagagcagagaaaa
ccaaacttcctgaaaggaatcttagttaatggttgcttactcaattttct
gtagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51380916_51381264
seq2: B6Ng01-084N07.g_70_363 (reverse)

seq1  GGAGAGCCTCGAAGATATGGGTACAGGGGAAAGCGTCAAAGATATGGGTA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGGAAAAGCCTCAAAGATATGGGTACAGGGGAAAAATTCCTGAATAGA  100
          | | |||||| ||||| |||  |||||||||| ||||||||| |||
seq2  ----GGAGAGCCTCGAAGATGTGGTCACAGGGGAAAGATTCCTGAACAGA  46

seq1  ACAGCAATGGCTTGTGCTGTAAGATCAAGAATCGATAAATGGGACCTCAT  150
      |||||||||||||||| ||||||||||||||| || ||||||||||||||
seq2  ACAGCAATGGCTTGTGTTGTAAGATCAAGAATTGACAAATGGGACCTCAT  96

seq1  AAAATTGCAAAGCTTCTGCAAAGCAAAAGACACCGTCAATAAGACAAAAA  200
      |||||||||||||||||| || || || ||||| ||||||||||||||||
seq2  AAAATTGCAAAGCTTCTGTAAGGC-AAGGACACTGTCAATAAGACAAAAA  145

seq1  GGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCCAAATCGGATAGG  250
      | ||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  GACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGG  195

seq1  GGACTAATATCCAATATATATAAA-GAACTCAAGAAGGTGGACTCCAGAA  299
      ||||||||||| |||||||||||| |||||||||||| || |||||||||
seq2  GGACTAATATCAAATATATATAAAGGAACTCAAGAAGTTGTACTCCAGAA  245

seq1  AATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  349
      || |||||||||| ||| ||||||||||  ||||||| || |||||||||
seq2  AACCAAATAACCCTATT-AAAAATGGGGTACAGAGCTAAATAAAGAATTC  294