BAC Information

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BAC

Clone NameB6Ng01-085C21
Chromosome14 (Build37)
Map Location 83,535,471 - 83,536,503
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085C21.bB6Ng01-085C21.g
ACCDH898922DH898923
length1,0341,214
definitionDH898922|Mus musculus domesticus DNA, BAC clone: B6Ng01-085C21, 5' end.DH898923|Mus musculus domesticus DNA, BAC clone: B6Ng01-085C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaatgctaacatgatgaccacatgctgggattcattactgaat
gttaagtgcttaatttgtgatgatgaaaaattttaaaaagcccggatgaa
aacaaagaaaacaaataagaaaatatgagggtgttatacacataaagtag
agcttaggtatactctatgttgaatttcattatcaaaatatattcctctc
atatttgtttatatttgtttatagtagggaataagcccgggccttattct
tgctaggcaagcacaaaatatacattttacatttcattattttttatttt
gtaaaaagcacaaagttgcccaagctgtccttgaacacattttttttttc
acttcagaaatgcctttcacatcaatactcctgttataatctcctgagaa
ttaaaggcttaaatcaccaaaacccattcacaataaatgtcagtgtgtat
ctgtgtgtgcctgtgtgtgtttgtgtgagtgtgtttgtgtgtgtgtgtgt
gtgcatgcatctacattagttaacattttttggaattctgatattcattc
acaagtgggagaagaacagcatcaatgtttggtgacttcttcattgctgt
gcacattgatttttgaggcatggtcactcttgaagttcagcattatggct
agaccagctgcaatgaatgttatgtttttcaatgctaatgtgctgcttaa
tgtcaatttagagaatgactctgcaagtggagatttgcctcaccatttca
gattcaagcatatagacttatagtgtctaacatagtgtgtagaagatcta
acccccataatttatgatagtgaaaatgagaacagcaagttgtttaagag
taaatgtggtgtgtttcagagaataggcaaagtcaaggatttcccattac
atgtactactgttggtcccacaatataagtgtatatggcatgaaagagca
gccagacatttagcatggaaagctcagccatggagagaacttacctggga
tctcagttgcctgcccgtccttccttgatgggtt
gaattcactacaagcttgttaaaactacatctcccatctaaataaaataa
aaaagagccatgatcactaccactctgattcagactcaggccagtctgta
gttcttacaattctattattcttttgactccaactcaaaataagcaaaac
aatctaattgcaaaagagaacaaatttttaaagagaacattatattattt
aacatgcttctataacattttaataatctcatgctttatagggcctttga
tttatatacttacacatatcagttcataagacttctggggacatctgaga
catgtttctctagatcactaattgtatttcacaataaaaattgtgtagtt
tagatgctgtaaactaattaggtaggctttctgcttctgttaatatgctt
caaggatgcatggcactttttagtactattttgcaacttcttgttaatct
ataattatttccaaatttaaagtttaaaaatggatgaagctatcataatt
attacagctgcatgtcataggatgggatactctttttatatatttcttaa
aatttattttacactcatgtagcagtttacccctccctcatcccatcaag
tgccctctacaaactttccttcttcaaattactcctcctctatttctctt
cagaaaaggacaggtctcccaagaattatcaagaaaatctggcatataaa
cttgtaataagactaggcacctcccctgatattaaaactaaacaaggtaa
tctattaggagggggatctaaagtagtcataagagtcagagaaaaaccat
gctccaactgttaagagagtaagatcaagctacacaaaaataacatgtgg
gtattacaaccaaaggtccttccctttgaaccgtgctattctctcaatgc
ccagatctctagtacattttaaagggttcctctacctaccacctaccaag
gttgcatatttacattcatactgctggtccaccatgctcaatcctgccct
gccccatacctgatcatgttcccatttcctaactctcttctccctctcca
ctcaattctctccactctgctctgcattctttctcctctaagtgagaatg
agcatactcattagcccctggctggtacttctggatcctgggacgtatct
gaaattcttctttgctacatacatatgatcacccacggtctttgtgtcga
acaatactaatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83535471_83536503
seq2: B6Ng01-085C21.b_45_1078

seq1  GAATTCACAATGCTAACATGATGACCACATGCTGGGATTCATTACTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGCTAACATGATGACCACATGCTGGGATTCATTACTGAAT  50

seq1  GTTAAGTGCTTAATTTGTGATGATGAAAAATTTTAAAAAGCCCGGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTGCTTAATTTGTGATGATGAAAAATTTTAAAAAGCCCGGATGAA  100

seq1  AACAAAGAAAACAAATAAGAAAATATGAGGGTGTTATACACATAAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAACAAATAAGAAAATATGAGGGTGTTATACACATAAAGTAG  150

seq1  AGCTTAGGTATACTCTATGTTGAATTTCATTATCAAAATATATTCCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGGTATACTCTATGTTGAATTTCATTATCAAAATATATTCCTCTC  200

seq1  ATATTTGTTTATATTTGTTTATAGTAGGGAATAAGCCCGGGCCTTATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTTATATTTGTTTATAGTAGGGAATAAGCCCGGGCCTTATTCT  250

seq1  TGCTAGGCAAGCACAAAATATACATTTTACATTTCATTATTTTTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCAAGCACAAAATATACATTTTACATTTCATTATTTTTTATTTT  300

seq1  GTAAAAAGCACAAAGTTGCCCAAGCTGTCCTTGAACACATTTTTTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGCACAAAGTTGCCCAAGCTGTCCTTGAACACATTTTTTTTTTC  350

seq1  ACTTCAGAAATGCCTTTCACATCAATACTCCTGTTATAATCTCCTGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAAATGCCTTTCACATCAATACTCCTGTTATAATCTCCTGAGAA  400

seq1  TTAAAGGCTTAAATCACCAAAACCCATTCACAATAAATGTCAGTGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCTTAAATCACCAAAACCCATTCACAATAAATGTCAGTGTGTAT  450

seq1  CTGTGTGTGCCTGTGTGTGTTTGTGTGAGTGTGTTTGTGTGTGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGCCTGTGTGTGTTTGTGTGAGTGTGTTTGTGTGTGTGTGTGT  500

seq1  GTGCATGCATCTACATTAGTTAACATTTTTTGGAATTCTGATATTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCATCTACATTAGTTAACATTTTTTGGAATTCTGATATTCATTC  550

seq1  ACAAGTGGGAGAAGAACAGCATCAATGTTTGGTGACTTCTTCATTGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGGGAGAAGAACAGCATCAATGTTTGGTGACTTCTTCATTGCTGT  600

seq1  GCACATTGATTTTTGAGGCATGGTCACTCTTGAAGTTCAGCATTATGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTGATTTTTGAGGCATGGTCACTCTTGAAGTTCAGCATTATGGCT  650

seq1  AGACCAGCTGCAATGAATGTTATG-TTTTCAATGCTAATGTGCTGCTTAA  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGACCAGCTGCAATGAATGTTATGTTTTTCAATGCTAATGTGCTGCTTAA  700

seq1  TGTCAA-TTAGAGAATGACTCTGCAAGTGGAGATTTGCCTCACCATTTCA  748
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTTAGAGAATGACTCTGCAAGTGGAGATTTGCCTCACCATTTCA  750

seq1  GATTCAAGCATATAGACTTATAGTGTCTAACATAGTGTGTAGAAGATCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAGCATATAGACTTATAGTGTCTAACATAGTGTGTAGAAGATCTA  800

seq1  ACACCCATAATTTATGATAG-GAAAATGAGAACAGCAAAGTTGTTTAAGA  847
      || ||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ACCCCCATAATTTATGATAGTGAAAATGAGAACAGC-AAGTTGTTTAAGA  849

seq1  GTAAATGTGGTGTG-TTCAGAGAATAGGCAAAGTCAAGGATTTCCCA-TA  895
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  GTAAATGTGGTGTGTTTCAGAGAATAGGCAAAGTCAAGGATTTCCCATTA  899

seq1  CATGTTACTACTGTTGGTCCCACAATATTAGTGTATATGGCATGAAAGAG  945
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATG-TACTACTGTTGGTCCCACAATATAAGTGTATATGGCATGAAAGAG  948

seq1  CAGCCAGACATTTAGCCATGGAAAGCTCAGCCATGGAGAGAACTTACCTG  995
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGCCAGACATTTAG-CATGGAAAGCTCAGCCATGGAGAGAACTTACCTG  997

seq1  GGATCTCCAGTTGCCTGCCCGTCCTTCCCTGATTGGTT  1033
      |||||| ||||||||||||||||||||| |||| ||||
seq2  GGATCT-CAGTTGCCTGCCCGTCCTTCCTTGATGGGTT  1034