BAC Information

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BAC

Clone NameB6Ng01-085G19
Chromosome14 (Build37)
Map Location 78,176,286 - 78,301,476
singlet/doubletdoublet
Overlap geneGm1587, Dnajc15
Upstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678
Downstream geneEpsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085G19.bB6Ng01-085G19.g
ACCDH899098DH899099
length1,087599
definitionDH899098|Mus musculus domesticus DNA, BAC clone: B6Ng01-085G19, 5' end.DH899099|Mus musculus domesticus DNA, BAC clone: B6Ng01-085G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,176,286 - 78,177,376)(78,300,878 - 78,301,476)
sequence
gaattctgtctccagctctgatggctgtggaaaattccactgcccccacc
ctccacctgctcgccatcaacactcacctgagtgctgctggttgttcgtc
tgggcttgaggagtccggggctacatttgtgttgtgatgtatttaatata
tgcctgctcacgacatcagtgctttatctgaagaatagatggaaagttat
tccaggctgagaggctaaagagatcagtttatggaaaagagagcctcctt
gtgccacacattctgtaaactacagatcaaaagccagaagagggatgtca
gccatgaataatgaaatcacacagccaaaggtctgtgtggaggcagattt
cctgatgatttcttttagggggtggggggaatcaaggcttatgcctcacg
ctgaatgctttgaagataagcgcccccaaggcggagcaagatagttatca
ctttcagtagagataggtgcgcttttgaaattgggttcatttaaatagcg
agtcctagagcaccttgccagataaggagggtcagagggcctttcagtga
gtttgagggacactttaatctccaataatttagttgttccatgatgtcag
gtggctaaggactaaggagatatatcctgaaaactgtactttggactaaa
atcacacaagtctgcatcctaagagcttcccgatgtggcaaaatcatgac
gggggagatagaagtcagagccacacccatatctctgaaggttccctgca
tgatcactccccaacccactaagctttagccctgccatctttcccgccct
caataataacccagcggctgctgtcaggcagagccagcatccttgtgtgt
gtggaaaccctgctacttaaggtggaggctaccgtgtccagatagctcct
ctgagctctgcacatcatggaggacttcctttcacagcagggcttctcct
tctctgaacttgtctggggatcctgaccaccccctccctccacctcttcc
tgaggaaagtcagttaccttggcaacctacaagttaaaactccgtttttt
ctaataaaaacccatctctcagtacctgtggttctta
gaattctatggtttttattgttttaaaaaccaccatgccacataatggtg
aaggaacatattttaggggacaggagactgacccaaaatctaatgaaact
gttatattgcttgaaattttaccaattagatattcatttaggaaatggct
ctcttttaagatattgctctcctcgggaaacactcatttacttattcctt
tgggtaaatgactttaatatgagcaaaagactttcagggttgagaagagg
aaagcagaagtggaaagggagaattaaaaaaaatatatgcgaagaaaatg
ctctaaaatgatgaaaaattcaggagtaaagtgagcaattttagctgacc
caccaagctttaaagaacaggatgaaactcaaaagaactttcctcagtct
agcttgcatgggaaacagacccacccatgcctttctctcctgagaaaacc
aagggatttgattttctaagttaccttagactaccctttcattgctgtgt
atgagattgtaagatgcttaagctctggatcctctcctgatgtgtaatgt
cataatgaaaatttaaaaaggaaggaagagatggagggtgggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78176286_78177376
seq2: B6Ng01-085G19.b_44_1130

seq1  GAATTCTGTCTCCAGCTCTGATGGCTGTGGAAAATTCCACTGCCCCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTCCAGCTCTGATGGCTGTGGAAAATTCCACTGCCCCCACC  50

seq1  CTCCACCTGCTCGCCATCAACACTCACCTGAGTGCTGCTGGTTGTTCGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTGCTCGCCATCAACACTCACCTGAGTGCTGCTGGTTGTTCGTC  100

seq1  TGGGCTTGAGGAGTCCGGGGCTACATTTGTGTTGTGATGTATTTAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTGAGGAGTCCGGGGCTACATTTGTGTTGTGATGTATTTAATATA  150

seq1  TGCCTGCTCACGACATCAGTGCTTTATCTGAAGAATAGATGGAAAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTCACGACATCAGTGCTTTATCTGAAGAATAGATGGAAAGTTAT  200

seq1  TCCAGGCTGAGAGGCTAAAGAGATCAGTTTATGGAAAAGAGAGCCTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTGAGAGGCTAAAGAGATCAGTTTATGGAAAAGAGAGCCTCCTT  250

seq1  GTGCCACACATTCTGTAAACTACAGATCAAAAGCCAGAAGAGGGATGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACACATTCTGTAAACTACAGATCAAAAGCCAGAAGAGGGATGTCA  300

seq1  GCCATGAATAATGAAATCACACAGCCAAAGGTCTGTGTGGAGGCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGAATAATGAAATCACACAGCCAAAGGTCTGTGTGGAGGCAGATTT  350

seq1  CCTGATGATTTCTTTTAGGGGGTGGGGGGAATCAAGGCTTATGCCTCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGATTTCTTTTAGGGGGTGGGGGGAATCAAGGCTTATGCCTCACG  400

seq1  CTGAATGCTTTGAAGATAAGCGCCCCCAAGGCGGAGCAAGATAGTTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCTTTGAAGATAAGCGCCCCCAAGGCGGAGCAAGATAGTTATCA  450

seq1  CTTTCAGTAGAGATAGGTGCGCTTTTGAAATTGGGTTCATTTAAATAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTAGAGATAGGTGCGCTTTTGAAATTGGGTTCATTTAAATAGCG  500

seq1  AGTCCTAGAGCACCTTGCCAGATAAGGAGGGTCAGAGGGCCTTTCAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAGAGCACCTTGCCAGATAAGGAGGGTCAGAGGGCCTTTCAGTGA  550

seq1  GTTTGAGGGACACTTTAATCTCCAATAATTTAGTTGTTCCATGATGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGGACACTTTAATCTCCAATAATTTAGTTGTTCCATGATGTCAG  600

seq1  GTGGCTAAGGACTAAGGAGATATATCCTGAAAACTGTACTTTGGACTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAAGGACTAAGGAGATATATCCTGAAAACTGTACTTTGGACTAAA  650

seq1  ATCACACAAGTCTGCATCCTAAGAGCTTCCCGATGTGGCAAAATCATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAAGTCTGCATCCTAAGAGCTTCCCGATGTGGCAAAATCATGAC  700

seq1  GGGGGAGATAGAAGTCAGAGCCACACCCATATCTCTGAAGGTTCCCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGATAGAAGTCAGAGCCACACCCATATCTCTGAAGGTTCCCTGCA  750

seq1  TGATCACTCCCCAACCCACTAAGCTTTAGCCCTGCCATC-TTCCCGCCCT  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGATCACTCCCCAACCCACTAAGCTTTAGCCCTGCCATCTTTCCCGCCCT  800

seq1  CAATAATAACCCAGCGGCTGCTGTCAGGCAGAGCCAGCATCCTTGTGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAACCCAGCGGCTGCTGTCAGGCAGAGCCAGCATCCTTGTGTGT  850

seq1  GTGGAAACCCTGCTACTTAAGGTTGGAGGCTACCGTGTCCAGATAGCTCC  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGGAAACCCTGCTACTTAAGG-TGGAGGCTACCGTGTCCAGATAGCTCC  899

seq1  TCTGAGCTCTGCACATCATGGAGGACTTCCTTCACCAGCAGGGCTTCTCC  949
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  TCTGAGCTCTGCACATCATGGAGGACTTCCTTTCACAGCAGGGCTTCTCC  949

seq1  TTCTCTGACCTTGTCTGGGGATCCTGACCACCCCCCCACTCCACCTCTAC  999
      |||||||| |||||||||||||||||||||||||| | |||||||||| |
seq2  TTCTCTGAACTTGTCTGGGGATCCTGACCACCCCCTCCCTCCACCTCTTC  999

seq1  CTGAGGAAAGTCAAGTAGCCCTTGGCAAACCTACAAGTTAAACATCCAGT  1049
      |||||||||||||  ||  ||||||| |||||||||||||||  |||  |
seq2  CTGAGGAAAGTCAGTTA--CCTTGGC-AACCTACAAGTTAAAACTCCGTT  1046

seq1  TTTCCTGATAAGAACCCACTCACCAAGTACCTGTGGTTCTTA  1091
      ||| || |||| |||||| || |  |||||||||||||||||
seq2  TTTTCTAATAAAAACCCA-TCTCTCAGTACCTGTGGTTCTTA  1087

seq1: chr14_78300878_78301476
seq2: B6Ng01-085G19.g_69_667 (reverse)

seq1  CCTCCCTCCCACCCTCCATCTCTTCCTTCCTTTTTAAATTTTCATTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCACCCTCCATCTCTTCCTTCCTTTTTAAATTTTCATTATGA  50

seq1  CATTACACATCAGGAGAGGATCCAGAGCTTAAGCATCTTACAATCTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACACATCAGGAGAGGATCCAGAGCTTAAGCATCTTACAATCTCATA  100

seq1  CACAGCAATGAAAGGGTAGTCTAAGGTAACTTAGAAAATCAAATCCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATGAAAGGGTAGTCTAAGGTAACTTAGAAAATCAAATCCCTTG  150

seq1  GTTTTCTCAGGAGAGAAAGGCATGGGTGGGTCTGTTTCCCATGCAAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCAGGAGAGAAAGGCATGGGTGGGTCTGTTTCCCATGCAAGCTA  200

seq1  GACTGAGGAAAGTTCTTTTGAGTTTCATCCTGTTCTTTAAAGCTTGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGAAAGTTCTTTTGAGTTTCATCCTGTTCTTTAAAGCTTGGTGG  250

seq1  GTCAGCTAAAATTGCTCACTTTACTCCTGAATTTTTCATCATTTTAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTAAAATTGCTCACTTTACTCCTGAATTTTTCATCATTTTAGAGC  300

seq1  ATTTTCTTCGCATATATTTTTTTTAATTCTCCCTTTCCACTTCTGCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCGCATATATTTTTTTTAATTCTCCCTTTCCACTTCTGCTTTC  350

seq1  CTCTTCTCAACCCTGAAAGTCTTTTGCTCATATTAAAGTCATTTACCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCAACCCTGAAAGTCTTTTGCTCATATTAAAGTCATTTACCCAA  400

seq1  AGGAATAAGTAAATGAGTGTTTCCCGAGGAGAGCAATATCTTAAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAGTAAATGAGTGTTTCCCGAGGAGAGCAATATCTTAAAAGAGA  450

seq1  GCCATTTCCTAAATGAATATCTAATTGGTAAAATTTCAAGCAATATAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTCCTAAATGAATATCTAATTGGTAAAATTTCAAGCAATATAACA  500

seq1  GTTTCATTAGATTTTGGGTCAGTCTCCTGTCCCCTAAAATATGTTCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTAGATTTTGGGTCAGTCTCCTGTCCCCTAAAATATGTTCCTTC  550

seq1  ACCATTATGTGGCATGGTGGTTTTTAAAACAATAAAAGCCATAGAATTC  599
      ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACCATTATGTGGCATGGTGGTTTTTAAAACAATAAAAACCATAGAATTC  599