BAC Information

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BAC

Clone NameB6Ng01-085K01
Chromosome14 (Build37)
Map Location 79,581,491 - 79,735,506
singlet/doubletdoublet
Overlap gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l
Upstream geneTnfsf11, LOC219180, Akap11, Dgkh, LOC673649, LOC629709
Downstream geneMtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085K01.bB6Ng01-085K01.g
ACCDH899253DH899254
length7981,103
definitionDH899253|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K01, 5' end.DH899254|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,734,712 - 79,735,506)(79,581,491 - 79,582,598)
sequence
gaattcacatcaggtttctttttcactgtacattttaaactggcgtaaaa
taaaatatttggatagaaggggttttttgtttgtttgttttttgttttgt
tttgtttggtttggtttggttttttcgagacagggtctctctgtgtagct
ctagctgtcctggaactcactatagaccaggctggcctacagaaatccac
ctgcctctgcctcccgagtgctgggattaaaggtgtgagctaccacgccc
ggctctggatagaagttttaaatggaatattgtgtaaacttattttatgc
tgtgtctggccttcaatttacatggacatctgttacaggtacttgtttat
acttgtacagtcttatacttctgaattatgagtgttgttgcttctgtatt
atatgcttcagttgctgattaaggtatagacagctttctgacactatttt
ctttaggtcctagtttcagaatctgttttgacctctggtttatttgatta
ttttgaagggttaactgaatgttaagaaatagccatatttctcattttgg
tcgataatgtgattttgtcccctttttaccttaacttgtatgattatttc
ctttgtcatagccataaaagtgatacttttatggttgaataaggatacac
cagtgttatgttgatgattccgaatgtgaagactggtttgcctcttagtc
atgtaaatttaacagttaaatttgttgtgtatgtagtctagtcttacagg
cgatttgggtaggaattgtgttttcgtggttgagctgcttggagactt
gaattctctcttaagttatactaattgtagtaaataagtattcaccagac
tgtggcaacatggtcaactattgaatcctagtgaactttggggttttcta
tcgccctgaataatcaaaactggtgagtagccaccgggagccggggcgca
acgagcgaggacaggagtgtcactctctgtaatgtttactcagagtggat
ctggtagtaatttgggaggtcttatttctatgtcattgccatgagtcaac
agctgctttctctgactcactgtggtcagcaagttgtggacacatctgtg
agttagtcatgcacacgtgtgtgccacgctgcttctaatcagggacactc
aacatagtttaaagggatgtataagatttgcttcctactgttattctcta
aacattcatgatatcttaagttatttatttatcctgcatatatgcatata
tgtgatgtacacacacacacacaggggaggagccatgcatgccacagcag
gtatatggaagtctgaggacagcatgcaggactcagttctctccttctcc
catgtagtcaggctccatggcaagttccttagccaccaagccatctcatg
agccatctcaccaccctctacaggattttcttgaaattattagttctgcc
tatcatatttcatgcatgccagcaagtatataatagtagaataatctgga
ctttttcttatttattattactgacaatctaaaaaaaaagtgcattggcg
ggtctgggccccaagctgatctctaagatttcacattttaatcagtaatt
tttgccagatagcggttcaatgccactctaactgccaagaaaagaaaaag
aaaaaagttcagcaagcagaagaaaacccaaaagctctaaagaggcgttc
ggaaaacgcttacgctctgggccaggccacctctcacgtaactgtgctgt
aacagtctggtatttcttcagcctaggtgaaaaatgaccttcaagtgact
gcgtagggatgctgacgcacagagtaaaggacgtggggcttctatctccc
aggctgacattcttaatgcatatcttaagtgtcaacctcgggacggtaag
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79734712_79735506
seq2: B6Ng01-085K01.b_44_841 (reverse)

seq1  AAGTCTCCAAGCAGCTCAACCACGAAAACACAATTCCTACCC-AATCGCC  49
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGTCTCCAAGCAGCTCAACCACGAAAACACAATTCCTACCCAAATCGCC  50

seq1  TGTAAGACTAGACTACATACACAACAAATTTAACTGTTAAATTTACATGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGACTAGACTACATACACAACAAATTTAACTGTTAAATTTACATGA  100

seq1  CTAAGAGGCAAACCAGTCTTCACATTCGGAATCATCAACATAACACTGGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGCAAACCAGTCTTCACATTCGGAATCATCAACATAACACTGGT  150

seq1  GTATCCTTATTCAACCAT-AAAGTATCACTTTTATGGCTATGACAAAGGA  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTATCCTTATTCAACCATAAAAGTATCACTTTTATGGCTATGACAAAGGA  200

seq1  AATAATCATACAAGTTAAGGTAAAAAGGGGAC-AAATCACATTATCGACC  247
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATAATCATACAAGTTAAGGTAAAAAGGGGACAAAATCACATTATCGACC  250

seq1  AAAATGAGAAATATGGCTATTTCTTAACATTCAGTTAACCCTTCAAAATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGAAATATGGCTATTTCTTAACATTCAGTTAACCCTTCAAAATA  300

seq1  ATCAAATAAACCAGAGGTCAAAACAGATTCTGAAACTAGGACCTAAAGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATAAACCAGAGGTCAAAACAGATTCTGAAACTAGGACCTAAAGAA  350

seq1  AATAGTGTCAGAAAGCTGTCTATACCTTAATCAGCAACTGAAGCATATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGTCAGAAAGCTGTCTATACCTTAATCAGCAACTGAAGCATATAA  400

seq1  TACAGAAGCAACAACACTCATAATTCAGAAGTATAAGACTGTACAAGTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGCAACAACACTCATAATTCAGAAGTATAAGACTGTACAAGTAT  450

seq1  AAACAAGTACCTGTAACAGATGTCCATGTAAATTGAAGGCCAGACACAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTACCTGTAACAGATGTCCATGTAAATTGAAGGCCAGACACAGC  500

seq1  ATAAAATAAGTTTACACAATATTCCATTTAAAACTTCTATCCAGAGCCGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAGTTTACACAATATTCCATTTAAAACTTCTATCCAGAGCCGG  550

seq1  GCGTGGTAGCTCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGTAGCTCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGT  600

seq1  GGATTTCTGTAGGCCAGCCTGGTCTATAGTGAGTTCCAGGACAGCTAGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTGTAGGCCAGCCTGGTCTATAGTGAGTTCCAGGACAGCTAGAG  650

seq1  CTACACAGAGAGACCCTGTCTCGAAAAAACCAAACCAAACCAAACAAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGAGAGACCCTGTCTCGAAAAAACCAAACCAAACCAAACAAAAC  700

seq1  AAAACAAAAAACAAACAAACAAAAAACCCCTTCTATCCAAATATTTTATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAACAAACAAACAAAAAACCCCTTCTATCCAAATATTTTATT  750

seq1  TTACGCCAGTTTAAAATGTACAGTGAAAAAGAAACCTGATGTGAATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCCAGTTTAAAATGTACAGTGAAAAAGAAACCTGATGTGAATTC  798

seq1: chr14_79581491_79582598
seq2: B6Ng01-085K01.g_69_1171

seq1  GAATTCTCTCTTAAGTTATACTAATTGTAGTAAATAAGTATTCACCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTAAGTTATACTAATTGTAGTAAATAAGTATTCACCAGAC  50

seq1  TGTGGCAACATGGTCAACTATTGAATCCTAGTGAACTTTGGGGTTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAACATGGTCAACTATTGAATCCTAGTGAACTTTGGGGTTTTCTA  100

seq1  TCGCCCTGAATAATCAAAACTGGTGAGTAGCCACCGGGAGCCGGGGCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTGAATAATCAAAACTGGTGAGTAGCCACCGGGAGCCGGGGCGCA  150

seq1  ACGAGCGAGGACAGGAGTGTCACTCTCTGTAATGTTTACTCAGAGTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCGAGGACAGGAGTGTCACTCTCTGTAATGTTTACTCAGAGTGGAT  200

seq1  CTGGTAGTAATTTGGGAGGTCTTATTTCTATGTCATTGCCATGAGTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGTAATTTGGGAGGTCTTATTTCTATGTCATTGCCATGAGTCAAC  250

seq1  AGCTGCTTTCTCTGACTCACTGTGGTCAGCAAGTTGTGGACACATCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTTCTCTGACTCACTGTGGTCAGCAAGTTGTGGACACATCTGTG  300

seq1  AGTTAGTCATGCACACGTGTGTGCCACGCTGCTTCTAATCAGGGACACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTCATGCACACGTGTGTGCCACGCTGCTTCTAATCAGGGACACTC  350

seq1  AACATAGTTTAAAGGGATGTATAAGATTTGCTTCCTACTGTTATTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGTTTAAAGGGATGTATAAGATTTGCTTCCTACTGTTATTCTCTA  400

seq1  AACATTCATGATATCTTAAGTTATTTATTTATCCTGCATATATGCATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCATGATATCTTAAGTTATTTATTTATCCTGCATATATGCATATA  450

seq1  TGTGATGTACACACACACACACAGGGGAGGAGCCATGCATGCCACAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTACACACACACACACAGGGGAGGAGCCATGCATGCCACAGCAG  500

seq1  GTATATGGAAGTCTGAGGACAGCATGCAGGACTCAGTTCTCTCCTTCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGGAAGTCTGAGGACAGCATGCAGGACTCAGTTCTCTCCTTCTCC  550

seq1  CATGTAGTCAGGCTCCATGGCAAGTTCCTTAGCCACCAAGCCATCTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGTCAGGCTCCATGGCAAGTTCCTTAGCCACCAAGCCATCTCATG  600

seq1  AGCCATCTCACCACCCTCTACAGGATTTTCTTGAAATTATTAGTTCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCACCACCCTCTACAGGATTTTCTTGAAATTATTAGTTCTGCC  650

seq1  TATCATATTTCATGCATGCCAGCAAGTATATAATAGTAGAATAATCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTTCATGCATGCCAGCAAGTATATAATAGTAGAATAATCTGGA  700

seq1  CTTTTTCTTATTTATTATTACTGACAATCTAAAAAAAAAGTGCATTGGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTATTTATTATTACTGACAATCTAAAAAAAAAGTGCATTGGCG  750

seq1  GGTCTGGGCCCCAAGCTGATCTCTAAGATTTCACATTTTAATCAGTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGGCCCCAAGCTGATCTCTAAGATTTCACATTTTAATCAGTAATT  800

seq1  TTTGCCAGATAGCGGTTCAATGCCACTCTAACTGCCAAGAAAAGAAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGATAGCGGTTCAATGCCACTCTAACTGCCAAGAAAAGAAAAAG  850

seq1  AAAAAAGTTCAGCAAGCAGAAGAAAACCCAAAAGCTCTAAAGAGGCGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTTCAGCAAGCAGAAGAAAACCCAAAAGCTCTAAAGAGGCGTTC  900

seq1  GGAAAACGCTTACGCTCTTGGCCAGGCCACCTCTCACGTAACTGTGCTGT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAAAACGCTTACGCTCTGGGCCAGGCCACCTCTCACGTAACTGTGCTGT  950

seq1  AACAGTCTGGTATTTCTTCAGCCTAGGTGAAAAATGACCTTCAAGTGACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTGGTATTTCTTCAGCCTAGGTGAAAAATGACCTTCAAGTGACT  1000

seq1  GCGTAGGGATGCTGACGCACAGAGTAAAGGACGTGGGGCTTCTATCCTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCGTAGGGATGCTGACGCACAGAGTAAAGGACGTGGGGCTTCTAT-CTCC  1049

seq1  CAGGCTGACATTTCTAAAATGCATTATCTTTAAGTTGTCAACCTCCGGAC  1100
      ||||||||||||  |  |||||| |||| ||||| |||||||||| ||||
seq2  CAGGCTGACATTCTT--AATGCA-TATC-TTAAG-TGTCAACCTCGGGAC  1094

seq1  GGT-AGCTT  1108
      ||| |||||
seq2  GGTAAGCTT  1103