BAC Information

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BAC

Clone NameB6Ng01-086D16
Chromosome14 (Build37)
Map Location 15,670,405 - 15,787,999
singlet/doubletdoublet
Overlap geneNek10
Upstream geneGm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7
Downstream geneLrrc3b, LOC667205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086D16.bB6Ng01-086D16.g
ACCDH899683DH899684
length1,139828
definitionDH899683|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D16, 5' end.DH899684|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,786,843 - 15,787,999)(15,670,405 - 15,671,232)
sequence
gaattctggtgttaagcacctcgtgtactcttcctctgcagcaactgaca
cttgttactatgaacatgtcagtatctaagatatcattgcaaatacttaa
tgcagaagtgataccttccaccatggagcccatttaacccatatcaagaa
gtaaatctaaaaatcaaccatctgacaaaaaaaaagactagaggcaagga
cgcccacaccagaggcctgtaagaactgtcaaactaacagtacctccgcg
gaacagagctcaggggctactttaccagaaacttctcccctttgagcatt
tcctcaaatatttgcaatggcatctgctcagcctatattagctaaaaggt
tttccaaagaccactagtagcaatcaagccaggccatgaggcacgagcaa
tgacatccgctacaaggggaggtaacagcagtgatcagaactcagtcact
tacagctccagcttcccttttgcagaacggtcctccagaactttctgaga
agatgaaagtaggtgactgtgaggccacacccaagtcattcatctgaccc
agggcttcaatatcccactacactgtattataaaccatatgcaatatgtc
tcttaggttcaataaaaataaagatgttaaatggcacaggcattgtgtgg
gcccattcacagcaggtggaaagaactgcttgggctgttggctaaagatc
accaacagaaataagacacagaactggggcacaaatgaagaagctatgaa
agagggcagaaccaggcagaagagtcagacagatggaaggatggtatgtg
tttgccgacttatttttcacagattttcctacaactcatgcagcactctc
aggctcaaggagcaggttgttcagaatccattggtgccaaaatttgtaga
tgaagaacacttaagatctcatggtatatgattagtacatccacggcagc
attgtcacctcagcaagacatgtgtgcactgaaactgcctgcccaacaca
acatgtgtgcactgtagctgccttccctgcaggacatgcgtgcactgcag
ctgctactcagtggtgtctattatactggatgtttcagctatcttccctg
gttcccactttatttgtgaactagtatggtgagtaagaa
gaattccagccccacaaggaggtctcataagtctccatgtgataaaaaga
ctaaatgcagactattaaagaacattcaaggaggagccgccagttctcag
actctcaagacattagcaaagggttgcctcagaataccttgtttgctgag
aaaattagtgacaattgatctgcttttaaggtatcacctttgtctatgct
gcttttgattgattggcagaaggtagattacaattctctttaaagcaaag
aatgcactgactagtctgtttatgatattttgatacatcctggtccagtg
tccctggctgacagtctttccatacaaggggaatctgcccaagctgtgct
cctggtctgcctcctaaacagaagcctgtgtgctctgccagttgtataac
actttgagttgccaagaattctcggccaaaatcacaaaaggccatgctag
ggattactccaaggttccagtgaatgtcagcaagcctttgccatcactgc
tctttcctctactcttcctcaagccagtgtgcaggcctagtctgtctcca
cttctcatggccagtcttcctgctcatggccttctaaaaccacatcatgg
gttttacagaggaaccataaatcaggctgctgggagccttctcctttctc
ttcttagttatttgatatgtttggactgtcgtgcaggtctcttccttcag
gagtaatgcccttcttctggccaggttctcgttacttctactgatctttt
ttctcatggtgcctctccttcaggttctcatcatcataaaattattctct
ctctctctctctctctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15786843_15787999
seq2: B6Ng01-086D16.b_43_1181 (reverse)

seq1  TTCTTTAACTCA-CATACTAGTTTCAACAAAATAAAAGTTGGTGAACCAA  49
      |||||  ||||| ||||||||||    || ||  |||||  | ||||| |
seq2  TTCTT--ACTCACCATACTAGTT----CACAAATAAAGT--GGGAACC-A  41

seq1  GGGAAGATAGCTGAAAACATCCCAAGGTATAATAGACACCAACTGAGTAG  99
      ||||||||||||| ||||||||    |||||||||||||| |||||||| 
seq2  GGGAAGATAGCTG-AAACATCC---AGTATAATAGACACC-ACTGAGTA-  85

seq1  GCAGCCTGCAGTGCACGCATGTCCTGCAGGGAAGGCAGCCTACAGTGCAC  149
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAG-CTGCAGTGCACGCATGTCCTGCAGGGAAGGCAG-CTACAGTGCAC  133

seq1  ACATGTTGTGTTGGGCAGGCAGTTTTCAGTGCACACATGTCTTGCTGAGG  199
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACATGTTGTGTTGGGCAGGCAG-TTTCAGTGCACACATGTCTTGCTGAGG  182

seq1  TGACAATGCTGCCGTGGATGTACTAATCATATACCATGAGATCTTAAGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGCTGCCGTGGATGTACTAATCATATACCATGAGATCTTAAGTG  232

seq1  TTCTTCATCTACAAATTTTGGCACCAATGGATTCTGAACAACCTGCTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATCTACAAATTTTGGCACCAATGGATTCTGAACAACCTGCTCCT  282

seq1  TGAGCCTGAGAGTGCTGCATGAGTTGTAGGAAAATCTGTGAAAAATAAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTGAGAGTGCTGCATGAGTTGTAGGAAAATCTGTGAAAAATAAGT  332

seq1  CGGCAAACACATACCATCCTTCCATCTGTCCTGACTCTTCTGCCTGGTTC  399
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGGCAAACACATACCATCCTTCCATCTGT-CTGACTCTTCTGCCTGGTTC  381

seq1  TGCCCTCTTTCATAGCTTCTTCATTTGTGCCCCAGTTCTGTGTCTTATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTTTCATAGCTTCTTCATTTGTGCCCCAGTTCTGTGTCTTATTT  431

seq1  CTGTTGGTGATCTTTAGCCAACAGCCCAAGCAGTTCTTTCCACCTGCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGTGATCTTTAGCCAACAGCCCAAGCAGTTCTTTCCACCTGCTGT  481

seq1  GAATGGGCCCACACAATGCCTGTGCCATTTAACATCTTTATTTTTATTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGCCCACACAATGCCTGTGCCATTTAACATCTTTATTTTTATTGA  531

seq1  ACCTAAGAGACATATTGCATATGGTTTATAATACAGTGTAGTGGGATATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGAGACATATTGCATATGGTTTATAATACAGTGTAGTGGGATATT  581

seq1  GAAGCCCTGGGTCAGATGAATGACTTGGGTGTGGCCTCACAGTCACCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCTGGGTCAGATGAATGACTTGGGTGTGGCCTCACAGTCACCTAC  631

seq1  TTTCATCTTCTCAGAAAGTTCTGGAGGACCGTTCTGCAAAAGGGAAGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTTCTCAGAAAGTTCTGGAGGACCGTTCTGCAAAAGGGAAGCTG  681

seq1  GAGCTGTAAGTGACTGAGTTCTGATCACTGCTGTTACCTCCCCTTGTAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTAAGTGACTGAGTTCTGATCACTGCTGTTACCTCCCCTTGTAGC  731

seq1  GGATGTCATTGCTCGTGCCTCATGGCCTGGCTTGATTGCTACTAGTGGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCATTGCTCGTGCCTCATGGCCTGGCTTGATTGCTACTAGTGGTC  781

seq1  TTTGGAAAACCTTTTAGCTAATATAGGCTGAGCAGATGCCATTGCAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAACCTTTTAGCTAATATAGGCTGAGCAGATGCCATTGCAAATA  831

seq1  TTTGAGGAAATGCTCAAAGGGGAGAAGTTTCTGGTAAAGTAGCCCCTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAAATGCTCAAAGGGGAGAAGTTTCTGGTAAAGTAGCCCCTGAG  881

seq1  CTCTGTTCCGCGGAGGTACTGTTAGTTTGACAGTTCTTACAGGCCTCTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCCGCGGAGGTACTGTTAGTTTGACAGTTCTTACAGGCCTCTGG  931

seq1  TGTGGGCGTCCTTGCCTCTAGTCTTTTTTTTTGTCAGATGGTTGATTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCGTCCTTGCCTCTAGTCTTTTTTTTTGTCAGATGGTTGATTTTT  981

seq1  AGATTTACTTCTTGATATGGGTTAAATGGGCTCCATGGTGGAAGGTATCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACTTCTTGATATGGGTTAAATGGGCTCCATGGTGGAAGGTATCA  1031

seq1  CTTCTGCATTAAGTATTTGCAATGATATCTTAGATACTGACATGTTCATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCATTAAGTATTTGCAATGATATCTTAGATACTGACATGTTCATA  1081

seq1  GTAACAAGTGTCAGTTGCTGCAGAGGAAGAGTACACGAGGTGCTTAACAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAGTGTCAGTTGCTGCAGAGGAAGAGTACACGAGGTGCTTAACAC  1131

seq1  CAGAATTC  1157
      ||||||||
seq2  CAGAATTC  1139

seq1: chr14_15670405_15671232
seq2: B6Ng01-086D16.g_69_896

seq1  GAATTCCAGCCCCACAAGGAGGTCTCATAAGTCTCCATGTGATAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCCCACAAGGAGGTCTCATAAGTCTCCATGTGATAAAAAGA  50

seq1  CTAAATGCAGACTATTAAAGAACATTCAAGGAGGAGCCGCCAGTTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGCAGACTATTAAAGAACATTCAAGGAGGAGCCGCCAGTTCTCAG  100

seq1  ACTCTCAAGACATTAGCAAAGGGTTGCCTCAGAATACCTTGTTTGCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAGACATTAGCAAAGGGTTGCCTCAGAATACCTTGTTTGCTGAG  150

seq1  AAAATTAGTGACAATTGATCTGCTTTTAAGGTATCACCTTTGTCTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGTGACAATTGATCTGCTTTTAAGGTATCACCTTTGTCTATGCT  200

seq1  GCTTTTGATTGATTGGCAGAAGGTAGATTACAATTCTCTTTAAAGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGATTGATTGGCAGAAGGTAGATTACAATTCTCTTTAAAGCAAAG  250

seq1  AATGCACTGACTAGTCTGTTTATGATATTTTGATACATCCTGGTCCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACTGACTAGTCTGTTTATGATATTTTGATACATCCTGGTCCAGTG  300

seq1  TCCCTGGCTGACAGTCTTTCCATACAAGGGGAATCTGCCCAAGCTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTGACAGTCTTTCCATACAAGGGGAATCTGCCCAAGCTGTGCT  350

seq1  CCTGGTCTGCCTCCTAAACAGAAGCCTGTGTGCTCTGCCAGTTGTATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTGCCTCCTAAACAGAAGCCTGTGTGCTCTGCCAGTTGTATAAC  400

seq1  ACTTTGAGTTGCCAAGAATTCTCGGCCAAAATCACAAAAGGCCATGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAGTTGCCAAGAATTCTCGGCCAAAATCACAAAAGGCCATGCTAG  450

seq1  GGATTACTCCAAGGTTCCAGTGAATGTCAGCAAGCCTTTGCCATCACTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACTCCAAGGTTCCAGTGAATGTCAGCAAGCCTTTGCCATCACTGC  500

seq1  TCTTTCCTCTACTCTTCCTCAAGCCAGTGTGCAGGCCTAGTCTGTCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCTACTCTTCCTCAAGCCAGTGTGCAGGCCTAGTCTGTCTCCA  550

seq1  CTTCTCATGGCCAGTCTTCCTGCTCATGGCCTTCTAAAACCACATCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATGGCCAGTCTTCCTGCTCATGGCCTTCTAAAACCACATCATGG  600

seq1  GTTTTACAGAGGAACCATAAATCAGGCTGCTGGGAGCCTTCTCCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAGAGGAACCATAAATCAGGCTGCTGGGAGCCTTCTCCTTTCTC  650

seq1  TTCTTAGTTATTTGATATGTTTGGACTGTCGTGCAGGTCTCTTCCTTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTTATTTGATATGTTTGGACTGTCGTGCAGGTCTCTTCCTTCAG  700

seq1  GAGTAATGCCCTTCTTCTGGCCAGGTTCTCGTTACTTCTACTGATCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATGCCCTTCTTCTGGCCAGGTTCTCGTTACTTCTACTGATCTTTT  750

seq1  TTCTCATGGTGCCTCTCCTTCAGGTTCTCATCATCATAAAATTATTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATGGTGCCTCTCCTTCAGGTTCTCATCATCATAAAATTATTCTCT  800

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCT  828
      ||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCT  828