BAC Information

Click to search

BAC

Clone NameB6Ng01-087A23
Chromosome14 (Build37)
Map Location 82,382,427 - 82,527,810
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087A23.bB6Ng01-087A23.g
ACCDH900291DH900292
length1,143849
definitionDH900291|Mus musculus domesticus DNA, BAC clone: B6Ng01-087A23, 5' end.DH900292|Mus musculus domesticus DNA, BAC clone: B6Ng01-087A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,526,663 - 82,527,810)(82,382,427 - 82,383,273)
sequence
gaattctgcagcatagtgttcataaaggcatatcatactcatatatatta
taaaataaaattccttataattattttattttttggtttacatattctat
tcattctagctgcctagaagatactgtgtaagccaggatggacttgaact
tgtagaaatcctgcctctgccttacatcattacacctagattttttttaa
cagtttttttttataggttatttatttatttacctttcaaatgttatccc
ctttatagactgattttttgtataaataaaatctttgattttaatatatt
ttatcgctttattttacatgtatgggattttactgtatgtttacatacat
actatatgcatgtagtgtcatgggaggccagaaaagtgtgttagatatgt
tgaacttgagatacagttataagtcactaggtggatagctaggaatggaa
accacacagctaacactcttaaccactaagtattctctagtccccacaaa
tatttgctatacattgaaccagtttgaatctaatcaatccataagcttcg
ttttatataaatcagtcagttgtctcagcaacaatagattgaatacctta
agtatattcaaattttgcctgcttaatggcttcatattaggattatatca
ggcttttaaaacttttttgagattataatattagtacatatattcttcct
tcgctatcctatctcaaggcttactatttcatttcattgtctcatttttc
tattacttgaaaataaatatttataattaatgtttctaaatattgtatgc
ccagtctgcataatgttagttgtatcttctttttcacaactgacctttgg
gacctgaataagcaattagtgtggtcttctttggggtctctattgctctc
actctactcatttcttagttgttggtagttctttgtacagggctgaagtc
tcagattctttccccatgtttatttttggcttgtctattgttgtgtcttt
gtttagcttaatgttttggcaatcatgattagtttttaatctatcagttt
tattttctttaataaattcatattatggaatttatgattaatgatcaatg
gccggatctattaacatataccagtttctttagtaaattttat
gaattctgctgaactttctacgtagaacacagagtagtgcatgattcctc
agtggggggaaaatagaaagttgcctgctatggagaataatacaaacctg
agaaagaaatttatgactatgaggaaaataactatgaatgaaatactgga
ctaaattattgaaaatttgcaacatattactttctaacgcttttcatttc
tgaaccccactatatataaaattgggcagagtatgatgttacaaaatatg
tttctgaagaagctggcattaacaaaaccatactttgcaaaacccaagct
aaagataaaaccaataatatttgattaattaattgactcacttttcatga
tgtgtatgtgcacaacataggcattcaggtgtgtgtgcatgggtatgtgt
gtatatccattactacttagttcctagcaatttttctaatataaatatgt
tccatatgagttctttgttaagtatgaagagatcagaaaaatgcaggact
agcaaagagagcagtatctgtaatcaaataatctagagtgagtagaatgt
taaagataagaaaaagaaggaggaggaagatgaggatgagaaggagaaga
gtgagaaaaggaaagagggaggagtaggatgaaagcaaaggaggaggaga
aggaagagattaaacacaaaatcacaaatattaaaagacaatagaaacaa
agggaacttaattttacgaaagttattatttgtgttctacacacagagcg
acacaaaatacacacgcagacacaaaacatacacacaaatacacacacac
gtgaaattaagagaaaggacataaactcatttcatttctgatttgcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82526663_82527810
seq2: B6Ng01-087A23.b_44_1186 (reverse)

seq1  ATAAAAATATTTACTAAAGAAATTGTTATAATGTTAATAGATCTGG-CAT  49
      |||||   |||||||||||||| || ||| ||||||||||||| || |||
seq2  ATAAA---ATTTACTAAAGAAACTGGTAT-ATGTTAATAGATCCGGCCAT  46

seq1  TGATCATTATATCAATAAATTCAATAATATTGAATTTATTAAAG-AAATA  98
      ||||||||| ||| |||||||| |||||| |||||||||||||| |||||
seq2  TGATCATTA-ATC-ATAAATTCCATAATA-TGAATTTATTAAAGAAAATA  93

seq1  AAACTGATAGATTAAAAACTAATCATGATTGCCAAAACATTAAGCTAAAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATAGATTAAAAACTAATCATGATTGCCAAAACATTAAGCTAAAC  143

seq1  AAAGACAACAACAATAGACAAGCC-AAAATAAACATGGGGAAAGAATCTG  197
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAGAC-ACAACAATAGACAAGCCAAAAATAAACATGGGGAAAGAATCTG  192

seq1  AGACTTCAGCCCTGTACAAAGAACTACCAACAACTAAGAAATGAGTAGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCAGCCCTGTACAAAGAACTACCAACAACTAAGAAATGAGTAGAG  242

seq1  TGAGAGCAATAGAGACCCCAAAGAAGACCACACTAATTGCTTATTCAGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAATAGAGACCCCAAAGAAGACCACACTAATTGCTTATTCAGGT  292

seq1  CCCAAAGGTCAGTTGTGAAAAAGAAGATACAACTAACATTATGCAGACTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGGTCAGTTGTGAAAAAGAAGATACAACTAACATTATGCAGACTG  342

seq1  GGCATACAATATTTAGAAACATTAATTATAAATATTTATTTTCAAGTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACAATATTTAGAAACATTAATTATAAATATTTATTTTCAAGTAAT  392

seq1  AGAAAAATGAGACAATGAAATGAAATAGTAAGCCTTGAGATAGGATAGCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGAGACAATGAAATGAAATAGTAAGCCTTGAGATAGGATAGCG  442

seq1  AAGGAAGAATATATGTACTAATATTATAATCTCAAAAAAGTTTTAAAAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAATATATGTACTAATATTATAATCTCAAAAAAGTTTTAAAAGC  492

seq1  CTGATATAATCCTAATATGAAGCCATTAAGCAGGCAAAATTTGAATATAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATAATCCTAATATGAAGCCATTAAGCAGGCAAAATTTGAATATAC  542

seq1  TTAAGGTATTCAATCTATTGTTGCTGAGACAACTGACTGATTTATATAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTATTCAATCTATTGTTGCTGAGACAACTGACTGATTTATATAAA  592

seq1  ACGAAGCTTATGGATTGATTAGATTCAAACTGGTTCAATGTATAGCAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGCTTATGGATTGATTAGATTCAAACTGGTTCAATGTATAGCAAAT  642

seq1  ATTTGTGGGGACTAGAGAATACTTAGTGGTTAAGAGTGTTAGCTGTGTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGGGACTAGAGAATACTTAGTGGTTAAGAGTGTTAGCTGTGTGG  692

seq1  TTTCCATTCCTAGCTATCCACCTAGTGACTTATAACTGTATCTCAAGTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTCCTAGCTATCCACCTAGTGACTTATAACTGTATCTCAAGTTC  742

seq1  AACATATCTAACACACTTTTCTGGCCTCCCATGACACTACATGCATATAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCTAACACACTTTTCTGGCCTCCCATGACACTACATGCATATAG  792

seq1  TATGTATGTAAACATACAGTAAAATCCCATACATGTAAAATAAAGCGATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTAAACATACAGTAAAATCCCATACATGTAAAATAAAGCGATA  842

seq1  AAATATATTAAAATCAAAGATTTTATTTATACAAAAAATCAGTCTATAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTAAAATCAAAGATTTTATTTATACAAAAAATCAGTCTATAAA  892

seq1  GGGGATAACATTTGAAAGGTAAATAAATAAATAACCTATAAAAAAAAACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAACATTTGAAAGGTAAATAAATAAATAACCTATAAAAAAAAACT  942

seq1  GTTAAAAAAAATCTAGGTGTAATGATGTAAGGCAGAGGCAGGATTTCTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAAAATCTAGGTGTAATGATGTAAGGCAGAGGCAGGATTTCTAC  992

seq1  AAGTTCAAGTCCATCCTGGCTTACACAGTATCTTCTAGGCAGCTAGAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGTCCATCCTGGCTTACACAGTATCTTCTAGGCAGCTAGAATG  1042

seq1  AATAGAATATGTAAACCAAAAAATAAAATAATTATAAGGAATTTTATTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATATGTAAACCAAAAAATAAAATAATTATAAGGAATTTTATTTT  1092

seq1  ATAATATATATGAGTATGATATGCCTTTATGAACACTATGCTGCAGAATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATATGAGTATGATATGCCTTTATGAACACTATGCTGCAGAATT  1142

seq1  C  1148
      |
seq2  C  1143

seq1: chr14_82382427_82383273
seq2: B6Ng01-087A23.g_69_917

seq1  GAATTCTGCTGAACTTTCTACGTAGAACACAGAGTAGTGCATGATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGAACTTTCTACGTAGAACACAGAGTAGTGCATGATTCCTC  50

seq1  AGTGGGGGGAAAATAGAAAGTTGCCTGCTATGGAGAATAATACAAACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGGAAAATAGAAAGTTGCCTGCTATGGAGAATAATACAAACCTG  100

seq1  AGAAAGAAATTTATGACTATGAGGAAAATAACTATGAATGAAATACTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAATTTATGACTATGAGGAAAATAACTATGAATGAAATACTGGA  150

seq1  CTAAATTATTGAAAATTTGCAACATATTACTTTCTAACGCTTTTCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTATTGAAAATTTGCAACATATTACTTTCTAACGCTTTTCATTTC  200

seq1  TGAACCCCACTATATATAAAATTGGGCAGAGTATGATGTTACAAAATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCCACTATATATAAAATTGGGCAGAGTATGATGTTACAAAATATG  250

seq1  TTTCTGAAGAAGCTGGCATTAACAAAACCATACTTTGCAAAACCCAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAGAAGCTGGCATTAACAAAACCATACTTTGCAAAACCCAAGCT  300

seq1  AAAGATAAAACCAATAATATTTGATTAATTAATTGACTCACTTTTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAACCAATAATATTTGATTAATTAATTGACTCACTTTTCATGA  350

seq1  TGTGTATGTGCACAACATAGGCATTCAGGTGTGTGTGCATGGGTATGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGCACAACATAGGCATTCAGGTGTGTGTGCATGGGTATGTGT  400

seq1  GTATATCCATTACTACTTAGTTCCTAGCAATTTTTCTAATATAAATATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCCATTACTACTTAGTTCCTAGCAATTTTTCTAATATAAATATGT  450

seq1  TCCATATGAGTTCTTTGTTAAGTATGAAGAGATCAGAAAAATGCAGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATGAGTTCTTTGTTAAGTATGAAGAGATCAGAAAAATGCAGGACT  500

seq1  AGCAAAGAGAGCAGTATCTGTAATCAAATAATCTAGAGTGAGTAGAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAGAGCAGTATCTGTAATCAAATAATCTAGAGTGAGTAGAATGT  550

seq1  TAAAGATAAGAAAAAGAAGGAGGAGGAAGATGAGGATGAGAAGGAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAAGAAAAAGAAGGAGGAGGAAGATGAGGATGAGAAGGAGAAGA  600

seq1  GTGAGAAAAGGAAAGAGGGAGGAGTAGGATGAAAGCAAAGGAGGAGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAAGGAAAGAGGGAGGAGTAGGATGAAAGCAAAGGAGGAGGAGA  650

seq1  AGGAAGAGATTAAACACAAAATCACAAATATTAAAAGACAATAGAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGATTAAACACAAAATCACAAATATTAAAAGACAATAGAAACAA  700

seq1  AGGGAACTTAATTTTACGAAAGTTATTATTTGTGTTCTACACACAGAGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACTTAATTTTACGAAAGTTATTATTTGTGTTCTACACACAGAGCG  750

seq1  ACACAAAATACACACGCAGACAC-AAACATACACACAAATACACACACAC  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACAAAATACACACGCAGACACAAAACATACACACAAATACACACACAC  800

seq1  GTGAAATTAAGAGAAAGGACATAAACTCATTTCATTTCTGA-TTGCACG  847
      ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTGAAATTAAGAGAAAGGACATAAACTCATTTCATTTCTGATTTGCACG  849