BAC Information

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BAC

Clone NameB6Ng01-087D08
Chromosome14 (Build37)
Map Location 90,054,052 - 90,169,409
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087D08.bB6Ng01-087D08.g
ACCDH900401DH900402
length974963
definitionDH900401|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D08, 5' end.DH900402|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,054,052 - 90,054,891)(90,168,446 - 90,169,409)
sequence
gaattccttaaatttcttctatgactagaaagccataaataataaaaatt
gcaacctatattttattgaaaacaactgttttacatacatatttcatcat
aggctcctttctcccaactcctctaaaatttttcccatgtccccacatat
ccaattaattatatattgtttctttctctctcgctttaggaaaaaagtca
agaaacaaataaaatacacaatgaaaaaaaaatacatataaatatacaca
tacataagcagaaaatccattaaagcagaaaatcagaaactgacctataa
aaacaaaagaccattaagacaagacaaaggcccaggcaaagagagaggat
actcgtactctacataagcgaccccaaaaattgtaccacagaacttctcc
agctgataacttcgtcaaagtggccaaatataaaattaactcaaataaat
cggtagccttcctttatacaaaggatacacaggctaaaaaagaaattagg
gaaaagattcccttcccaatagccacaaacataaaatatctttgggtaac
tctaaccaaacaagtgaaagacccaattgacaatactttcaaatatctca
agaaagaaatcgaggatctcagaaaagggagagattcccctatgctcata
gatcggaagaattaatataataaaaatggccatctcaccaaaggctatct
atagatttaaatctatagatttacccatcaaaatccccaaacaattcttc
aaatacatcaaattcatttggaaaggcttaaaacccagaatagcgaaaac
aggtcttaacaataaaagaagagttagggtaattactgtccctcatctca
agctttactgcagagcaatagtggggggaaaaaaacccaaaaaacaaaaa
actgcatgtgcatggtattggtagagagacagaaatgttgatcaatggag
tagaattgaagactctgaaataaa
gaattcctctattttgataaaataatcacatagatgacattcaatacagt
atttattttgtaaacatacagaaattttcatccttaatttgaacaatata
atcataacatcaagagataatgttacattattaatcattaagatttcaaa
taagttaagagtgttattttaaccatttaagattaaaaattatgtagaat
attatgaaaataaatatttcagaaaattaagtgaagcactaccttcttaa
aaagtgaaacaacattgtttgcataaaataagagatactcatgtcaatgt
tcttgcattttacacgtctgttccttttttaaatataataaaatttagtc
ataaatgtatatatatatatatatatatatatatataaaacataaaatgt
gtatgtaaatcaaatcactataaagaaactttcacccgaaggtatgcttt
ataataatgttatagtgtttctagcattatgacactgaaggaataaatct
ttcatggaaagtaaattattaattgcaatattaaatacagccatattttt
tatttctgccaattccaaaattctcaagaagatttctagctggttttgct
tactagatattgttaacactgtcaagctcatctatcccagtggaatatcc
caagaagtgattcacagagaacaactacttgtttcaccctccaaaccaat
taaacgtggaaccaatttcacaaagatcctttgacataaacagttccact
ctgatctgttggctgaatgtatgtcacaccattgaaggcttgatgcttaa
gaaatacataaagatatatccagggttaatcagaacgcttcaaaaatgct
aatcattgcatcactaacagattgaatcccgaaaatctcaattccatatc
caataaaagattaaatattaaaaaagcagagttatattatctaaatcgtt
ctgcattttagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90054052_90054891
seq2: B6Ng01-087D08.b_48_887

seq1  GAATTCCTTAAATTTCTTCTATGACTAGAAAGCCATAAATAATAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAATTTCTTCTATGACTAGAAAGCCATAAATAATAAAAATT  50

seq1  GCAACCTATATTTTATTGAAAACAACTGTTTTACATACATATTTCATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTATATTTTATTGAAAACAACTGTTTTACATACATATTTCATCAT  100

seq1  AGGCTCCTTTCTCCCAACTCCTCTAAAATTTTTCCCATGTCCCCACATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCTTTCTCCCAACTCCTCTAAAATTTTTCCCATGTCCCCACATAT  150

seq1  CCAATTAATTATATATTGTTTCTTTCTCTCTCGCTTTAGGAAAAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAATTATATATTGTTTCTTTCTCTCTCGCTTTAGGAAAAAAGTCA  200

seq1  AGAAACAAATAAAATACACAATGAAAAAAAAATACATATAAATATACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAATAAAATACACAATGAAAAAAAAATACATATAAATATACACA  250

seq1  TACATAAGCAGAAAATCCATTAAAGCAGAAAATCAGAAACTGACCTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGCAGAAAATCCATTAAAGCAGAAAATCAGAAACTGACCTATAA  300

seq1  AAACAAAAGACCATTAAGACAAGACAAAGGCCCAGGCAAAGAGAGAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGACCATTAAGACAAGACAAAGGCCCAGGCAAAGAGAGAGGAT  350

seq1  ACTCGTACTCTACATAAGCGACCCCAAAAATTGTACCACAGAACTTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTACTCTACATAAGCGACCCCAAAAATTGTACCACAGAACTTCTCC  400

seq1  AGCTGATAACTTCGTCAAAGTGGCCAAATATAAAATTAACTCAAATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATAACTTCGTCAAAGTGGCCAAATATAAAATTAACTCAAATAAAT  450

seq1  CGGTAGCCTTCCTTTATACAAAGGATACACAGGCTAAAAAAGAAATTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGCCTTCCTTTATACAAAGGATACACAGGCTAAAAAAGAAATTAGG  500

seq1  GAAAAGATTCCCTTCCCAATAGCCACAAACATAAAATATCTTTGGGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATTCCCTTCCCAATAGCCACAAACATAAAATATCTTTGGGTAAC  550

seq1  TCTAACCAAACAAGTGAAAGACCCAATTGACAATACTTTCAAATATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCAAACAAGTGAAAGACCCAATTGACAATACTTTCAAATATCTCA  600

seq1  AGAAAGAAATCGAGGATCTCAGAAAAGGGAGAGATTCCCCTATGCTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAATCGAGGATCTCAGAAAAGGGAGAGATTCCCCTATGCTCATA  650

seq1  GATCGGAAGAATTAATATAATAAAAATGGCCATCTCACCAAAGGCTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGAAGAATTAATATAATAAAAATGGCCATCTCACCAAAGGCTATCT  700

seq1  ATAGATTTAAATCTATAGATTTACCCATCAAAATCCCCAAACAATTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTAAATCTATAGATTTACCCATCAAAATCCCCAAACAATTCTTC  750

seq1  AAATACATCAAATTCATTTGGAAAGGCTTAAAACCCAGAATAGCGAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATCAAATTCATTTGGAAAGGCTTAAAACCCAGAATAGCGAAAAC  800

seq1  AGGTCTTAACAATAAAAGAAGAGTTAGGGTAATTACTGTC  840
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTAACAATAAAAGAAGAGTTAGGGTAATTACTGTC  840

seq1: chr14_90168446_90169409
seq2: B6Ng01-087D08.g_70_1032 (reverse)

seq1  CACT-AAATGCAAGAATCGATTTAGATAATATAACTCTTGCTTTTTTAAT  49
      |||| |||||| |||| |||||||||||||||||||| ||||||||||||
seq2  CACTAAAATGC-AGAA-CGATTTAGATAATATAACTC-TGCTTTTTTAAT  47

seq1  ATTTAATCTTTTATTGGATATGGAATTGAGATTTTCGGGATTCAATCTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCTTTTATTGGATATGGAATTGAGATTTTCGGGATTCAATCTGT  97

seq1  TAGTGATGCAATGATTAGCATTTTTGAAGCGTTCTGATTAA-CCTGGATA  148
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGTGATGCAATGATTAGCATTTTTGAAGCGTTCTGATTAACCCTGGATA  147

seq1  TATCTTTATGTATTTCTTAAGCATCAAGCCTTCAATGGTGTGACATACAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATGTATTTCTTAAGCATCAAGCCTTCAATGGTGTGACATACAT  197

seq1  TCAGCCAACAGATCAGAGTGGAACTGTTTATGTCAAAGGATCTTTGTGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAACAGATCAGAGTGGAACTGTTTATGTCAAAGGATCTTTGTGAA  247

seq1  ATTGGTTCCACGTTTAATTGGTTTGGAGGGTGAAACAAGTAGTTGTTCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTCCACGTTTAATTGGTTTGGAGGGTGAAACAAGTAGTTGTTCTC  297

seq1  TGTGAATCACTTCTTGGGATATTCCACTGGGATAGATGAGCTTGACAGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATCACTTCTTGGGATATTCCACTGGGATAGATGAGCTTGACAGTG  347

seq1  TTAACAATATCTAGTAAGCAAAACCAGCTAGAAATCTTCTTGAGAATTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATATCTAGTAAGCAAAACCAGCTAGAAATCTTCTTGAGAATTTT  397

seq1  GGAATTGGCAGAAATAAAAAATATGGCTGTATTTAATATTGCAATTAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGGCAGAAATAAAAAATATGGCTGTATTTAATATTGCAATTAATA  447

seq1  ATTTACTTTCCATGAAAGATTTATTCCTTCAGTGTCATAATGCTAGAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTCCATGAAAGATTTATTCCTTCAGTGTCATAATGCTAGAAAC  497

seq1  ACTATAACATTATTATAAAGCATACCTTCGGGTGAAAGTTTCTTTATAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAACATTATTATAAAGCATACCTTCGGGTGAAAGTTTCTTTATAGT  547

seq1  GATTTGATTTACATACACATTTTATGTTTTATATATATATATATATATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATTTACATACACATTTTATGTTTTATATATATATATATATATAT  597

seq1  ATATATATACATTTATGACTAAATTTTATTATATTTAAAAAAGGAACAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATACATTTATGACTAAATTTTATTATATTTAAAAAAGGAACAGA  647

seq1  CGTGTAAAATGCAAGAACATTGACATGAGTATCTCTTATTTTATGCAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAAATGCAAGAACATTGACATGAGTATCTCTTATTTTATGCAAAC  697

seq1  AATGTTGTTTCACTTTTTAAGAAGGTAGTGCTTCACTTAATTTTCTGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTTTCACTTTTTAAGAAGGTAGTGCTTCACTTAATTTTCTGAAA  747

seq1  TATTTATTTTCATAATATTCTACATAATTTTTAATCTTAAATGGTTAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTCATAATATTCTACATAATTTTTAATCTTAAATGGTTAAAA  797

seq1  TAACACTCTTAACTTATTTGAAATCTTAATGATTAATAATGTAACATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTCTTAACTTATTTGAAATCTTAATGATTAATAATGTAACATTAT  847

seq1  CTCTTGATGTTATGATTATATTGTTCAAATTAAGGATGAAAATTTCTGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATGTTATGATTATATTGTTCAAATTAAGGATGAAAATTTCTGTA  897

seq1  TGTTTACAAAATAAATACTGTATTGAATGTCATCTATGTGATTATTTTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAAAATAAATACTGTATTGAATGTCATCTATGTGATTATTTTAT  947

seq1  CAAAATAGAGGAATTC  964
      ||||||||||||||||
seq2  CAAAATAGAGGAATTC  963