BAC Information

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BAC

Clone NameB6Ng01-087D12
Chromosome14 (Build37)
Map Location 4,127,811 - 4,128,941
singlet/doubletsinglet
Overlap geneENSMUSG00000068790
Upstream geneLOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019
Downstream geneLOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087D12.bB6Ng01-087D12.g
ACCDH900407DH900408
length1,2651,124
definitionDH900407|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D12, 5' end.DH900408|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatacataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagacacaaataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
caggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacggagcaattgtgataaaaacttca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
tccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaccatccagtggaagaaagacagcattttcaacaattggtgctggc
acaactggttgttatcgtgtagaagaatgcgaatcgatccatacttatct
ccttgtactaagtcaaatctaagtggatcgaggaacttcacataaaacca
gagaaactgaaacttatagaaggagaaagtgggaaaagcctgaagatatg
ggcacaggggaaaattcttgaacagaacagcatgcttgttgctgtagatc
gagatggacaatgggacttatgaactccaagtttcctgcaaggccaaaga
atcgtcatagacgaagactctcacgaatggagaggacttttacctctctc
taaaactcagaatta
gaattcaccatgacctcctcattctgggtaattctccctgaaatgtggat
tatatagtttggccaaattcataggactaggccaaagatcaagagtcctt
gttctgaaagaaaaaaaaaaaaggagaaatgtcctcatagtttctgtata
cccacacctgtgccataaactactgagagtttagagacctcgtctgtccc
tccagtcctatgcgggagctcaaacaaccagaactctaaccacctggaca
cccagcctctggagacctttggacaagatagcaagattaataagcttaga
tgatcctagtacataggaggtagaaggtaacatactgtaagcttggatag
ttcagaatccatcctggattcaggtgacccttgaagcctgtgttcttggg
actctttgctcttggggccaggcccaaccacagatcaaatccttactatg
aaaaattgaaagtggagactaagcaggtaatgttggacctgcagagctta
cagaatgtgtacactgaggcctcagagacatttgaattcctggcaaagag
aaaggctgctataggtaactgtctgtcttgcttgggagcacatgagctgt
agaattgccatctctgcttttgatcctgcacaggagactctcgagctctg
gttcttgctttctgccacttcacacaggagcctttagatttttctgttgt
aaacctgtgggttgaaacactttttggggtaaaaaaaaaaaggtcaaagg
accctttcacagaggttgtgtatcagacaatcctttatctcagacacttc
tattatggcttataacagtacaaaaattataatacccaagtagcaatgaa
aataatcttaagtttgggaggtcactgcattaaagcatccacagcatttg
gtaaattgagaaaccctggtcttgacagaagaactatttgtatcatgtga
ggtcttcctgacccccggggctgagtcaggatctgtagagagctagttac
cagcagacccatatatagcagtatccccttgttcctccttccaatccata
gtgccttgcccattcctccgtgatgttctcccataggatgacagtaagga
acactgtagtccactccttctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4127811_4128941
seq2: B6Ng01-087D12.g_69_1192

seq1  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50

seq1  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGTCCTT  100

seq1  GTTCTGAAAGAAAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAGAAAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATA  150

seq1  CCCACACCTGTGCCATAAACTACTGAGAGTTTAGAGACCTCGTCTGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCTGTGCCATAAACTACTGAGAGTTTAGAGACCTCGTCTGTCCC  200

seq1  TCCAGTCCTATGCGGGAGCTCAAACAACCAGAACTCTAACCACCTGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCTATGCGGGAGCTCAAACAACCAGAACTCTAACCACCTGGACA  250

seq1  CCCAGCCTCTGGAGACCTTTGGACAAGATAGCAAGATTAATAAGCTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTCTGGAGACCTTTGGACAAGATAGCAAGATTAATAAGCTTAGA  300

seq1  TGATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTAAGCTTGGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTAAGCTTGGATAG  350

seq1  TTCAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGG  400

seq1  ACTCTTTGCTCTTGGGGCCAGGCCCAACCACAGATCAAATCCTTACTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGCTCTTGGGGCCAGGCCCAACCACAGATCAAATCCTTACTATG  450

seq1  AAAAATTGAAAGTGGAGACTAAGCAGGTAATGTTGGACCTGCAGAGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGAAAGTGGAGACTAAGCAGGTAATGTTGGACCTGCAGAGCTTA  500

seq1  CAGAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGAG  550

seq1  AAAGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGT  600

seq1  AGAATTGCCATCTCTGCTTTTGATCCTGCACAGGAGACTCTCGAGCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGCCATCTCTGCTTTTGATCCTGCACAGGAGACTCTCGAGCTCTG  650

seq1  GTTCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGT  700

seq1  AAACCTGTGGGTTGAAACACTTTTTGGGGTAAAAAAAAAAAGGTCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTGGGTTGAAACACTTTTTGGGGTAAAAAAAAAAAGGTCAAAGG  750

seq1  ACCCTTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTC  800

seq1  TATTATGGCTTATAACAGTACAAAAATTATAATACCCAAGTAGCAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGCTTATAACAGTACAAAAATTATAATACCCAAGTAGCAATGAA  850

seq1  AATAATCTTAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTTAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTG  900

seq1  GTAAATTGAGAAACCCTGGTCTTGACAGAAGAACTATTTGTATCATGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGAGAAACCCTGGTCTTGACAGAAGAACTATTTGTATCATGTGA  950

seq1  GGTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTGTAGAGAGCTAGTTAC  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCCTGACCCCCGGGGCTGAGTCAGGATCTGTAGAGAGCTAGTTAC  1000

seq1  CAGCAGACCCATATATAGCAAGTATTCCCCTTGTTTCTCCTTTCCAATTC  1050
      ||||||||||||||||||| |||| |||||||||| |||| ||||||| |
seq2  CAGCAGACCCATATATAGC-AGTA-TCCCCTTGTTCCTCC-TTCCAATCC  1047

seq1  ATAGTGCCTTTGCCCATTCCTTCGTGATGTTTCTCCATTAGGATGGACAG  1100
      |||||||| |||||||||||| ||||||| ||||||  |||||| |||| 
seq2  ATAGTGCC-TTGCCCATTCCTCCGTGATG-TTCTCCCATAGGAT-GACA-  1093

seq1  GTAGGGACAACTGTAGTCCACTTCTTCTTTT  1131
      ||| |||  ||||||||||||| ||||||||
seq2  GTAAGGAACACTGTAGTCCACTCCTTCTTTT  1124