BAC Information

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BAC

Clone NameB6Ng01-088I06
Chromosome14 (Build37)
Map Location 26,130,493 - 26,131,601
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669325, Polr3a, Rps24, LOC669315, LOC100039411
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088I06.bB6Ng01-088I06.g
ACCDH901345DH901346
length1721,104
definitionDH901345|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I06, 5' end.DH901346|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaggcatcctcagctgtacagtgaatgccaggcctgaacctcagaaagtc
tcatcaagtccgggaggggacctccgtggtacagtacttgcctagcgtgg
ctaaagctccaggtttgatccccagtactatgaaggaaagaggggaggga
gggagagaaaatggtagtgggg
gaattcatcccaggcaggactttaagcaccaggcctggctaacattagct
cacaatctctagggcctggcatagattctttactggttcccaggagtcgg
ggacacagaagggattccccctcaccttctttgaacccatcaggggcagc
catttaggggtgtcaggcagggctgtgtggaacagtcagagccccaggcc
acagctaaccatctgggtcccccaccctggacattgaagaaggaacaatc
aaatgaagaccagaacagccacacagccctgccccagacccagtacacca
ccccactgctcctgcttctaattactgcctccaggccccgggacagggct
ggtgcctctaacattcacagatcgtggcccctggtcaggcgtggctggta
ttatttctgtttggttgatatcaagtgatagagtgagacacatagagaca
gacgaggtccaaccgctatatgtataaggaccaaattcatactctgcact
gggactatacagattctagaatgttccttgaagatagcagccggatttaa
gggtgcacccagcactggatcattcagagtggacagtctgcttttgtgat
accacaggaagtggttttctctgcactcctgctgtgagattgtctcctta
cagtttggagagcagaggagcgctattttagacccgagtggtgaagaggt
tgagagcccagcagaccacctggcagctttcccagtcccttatgctgtaa
gcctgaaggattgtgggaatttaggggggagaacatgtaggagacagtag
gacatgtaggagacagtaggaacatgtatgagacagtaaggaacatatat
gagacagtaggaacatgtatgagacagtaggaacatgtatgagacagtag
gaacatgtatgagacagtaggaacatgtatgagacagtagaacatgtaga
gcgtctgtttcaggtccagaatcatctaacacaactcatcacccttgcct
gcttgtcatccactgggccttcagttgccccttctgtgaaatggaaaggg
taagccacctttatgatggagaaggctaatcaaaggagccaagatttctt
ttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26130493_26131601
seq2: B6Ng01-088I06.g_68_1171

seq1  GAATTCATCCCAGGCAGGACTTTAAGCACCAGGCCTGGCTAACATTAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCAGGCAGGACTTTAAGCACCAGGCCTGGCTAACATTAGCT  50

seq1  CACAATCTCTAGGGCCTGGCATAGATTCTTTACTGGTTCCCAGGAGTCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCTCTAGGGCCTGGCATAGATTCTTTACTGGTTCCCAGGAGTCGG  100

seq1  GGACACAGAAGGGATTCCCCCTCACCTTCTTTGAACCCATCAGGGGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGAAGGGATTCCCCCTCACCTTCTTTGAACCCATCAGGGGCAGC  150

seq1  CATTTAGGGGTGTCAGGCAGGGCTGTGTGGAACAGTCAGAGCCCCAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGGGTGTCAGGCAGGGCTGTGTGGAACAGTCAGAGCCCCAGGCC  200

seq1  ACAGCTAACCATCTGGGTCCCCCACCCTGGACATTGAAGAAGGAACAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAACCATCTGGGTCCCCCACCCTGGACATTGAAGAAGGAACAATC  250

seq1  AAATGAAGACCAGAACAGCCACACAGCCCTGCCCCAGACCCAGTACACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGACCAGAACAGCCACACAGCCCTGCCCCAGACCCAGTACACCA  300

seq1  CCCCACTGCTCCTGCTTCTAATTACTGCCTCCAGGCCCCGGGACAGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGCTCCTGCTTCTAATTACTGCCTCCAGGCCCCGGGACAGGGCT  350

seq1  GGTGCCTCTAACATTCACAGATCGTGGCCCCTGGTCAGGCGTGGCTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTCTAACATTCACAGATCGTGGCCCCTGGTCAGGCGTGGCTGGTA  400

seq1  TTATTTCTGTTTGGTTGATATCAAGTGATAGAGTGAGACACATAGAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGTTTGGTTGATATCAAGTGATAGAGTGAGACACATAGAGACA  450

seq1  GACGAGGTCCAACCGCTATATGTATAAGGACCAAATTCATACTCTGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAGGTCCAACCGCTATATGTATAAGGACCAAATTCATACTCTGCACT  500

seq1  GGGACTATACAGATTCTAGAATGTTCCTTGAAGATAGCAGCCGGATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTATACAGATTCTAGAATGTTCCTTGAAGATAGCAGCCGGATTTAA  550

seq1  GGGTGCACCCAGCACTGGATCATTCAGAGTGGACAGTCTGCTTTTGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACCCAGCACTGGATCATTCAGAGTGGACAGTCTGCTTTTGTGAT  600

seq1  ACCACAGGAAGTGGTTTTCTCTGCACTCCTGCTGTGAGATTGTCTCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGAAGTGGTTTTCTCTGCACTCCTGCTGTGAGATTGTCTCCTTA  650

seq1  CAGTTTGGAGAGCAGAGGAGCGCTATTTTAGACCCGAGTGGTGAAGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGAGAGCAGAGGAGCGCTATTTTAGACCCGAGTGGTGAAGAGGT  700

seq1  TGAGAGCCCAGCAGACCACCTGGCAGCTTTCCCAGTCCCTTATGCTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCCAGCAGACCACCTGGCAGCTTTCCCAGTCCCTTATGCTGTAA  750

seq1  GCCTGAAGGATTGTGGGAATTTAGGGGGGAGAACATGTAGGAGACAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGGATTGTGGGAATTTAGGGGGGAGAACATGTAGGAGACAGTAG  800

seq1  GAACATGTAGGAGACAGTAGGAACATGTATGAGACAGT-AGGAACATATA  849
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  G-ACATGTAGGAGACAGTAGGAACATGTATGAGACAGTAAGGAACATATA  849

seq1  TGAGACAGTAGGAACATGTATGAGACAGTAGGAACATGTATGAGACAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGTAGGAACATGTATGAGACAGTAGGAACATGTATGAGACAGTA  899

seq1  GGAACATGTATGAGACAGTAGGAACATGTATGAGACAGTAGGAACATGTA  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGAACATGTATGAGACAGTAGGAACATGTATGAGACAGTA-GAACATGTA  948

seq1  GGAGCGTCTGTTCCAGGTCCCAGAATCATCTAACACCAACTCATCACCCT  999
       ||||||||||| ||||| |||||||||||||||| ||||||||||||||
seq2  -GAGCGTCTGTTTCAGGT-CCAGAATCATCTAACA-CAACTCATCACCCT  995

seq1  TGCCTGCTTGTCATCCCACTGGGCCTCCAGTTGCCCC-TCTGTGAAATGG  1048
      |||||||||||||| ||||||||||| |||||||||| ||||||||||||
seq2  TGCCTGCTTGTCAT-CCACTGGGCCTTCAGTTGCCCCTTCTGTGAAATGG  1044

seq1  -AATGGTAAGCCAACCTTATGATGGAAGAAAGGCTAAACAAAAGGAG-CA  1096
       || ||||||||| | ||||||||||   |||||||| | ||||||| ||
seq2  AAAGGGTAAGCCACCTTTATGATGGA--GAAGGCTAATC-AAAGGAGCCA  1091

seq1  AGATTTCTTTTAA  1109
      ||||||||||| |
seq2  AGATTTCTTTTTA  1104