BAC Information

Click to search

BAC

Clone NameB6Ng01-089F02
Chromosome14 (Build37)
Map Location 28,465,924 - 28,631,028
singlet/doubletdoublet
Overlap geneErc2
Upstream geneArf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089F02.bB6Ng01-089F02.g
ACCDH901927DH901928
length1,222800
definitionDH901927|Mus musculus domesticus DNA, BAC clone: B6Ng01-089F02, 5' end.DH901928|Mus musculus domesticus DNA, BAC clone: B6Ng01-089F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,629,798 - 28,631,028)(28,465,924 - 28,466,721)
sequence
gaattccctaagaaatggaaattttcacacaagagggtgttttgattttc
tttctttggaagtcacgatgtacatgtgagttttaacaactctttatcca
gtggaagtcctaagatggcaggagcttttatgaatagcacactatgcaaa
tggctcctgtctttctctcctcagacccatgcactccagcaaaggtgggt
ttgtaagtcacaaagtagaaggaacaaatgcatagttactgaaggagtta
tcaccatgccaatgtgatttgtcgaaccctcccaggttgccatccaggct
agaagggcaaggacaagcagttgggcctgagcttctagtctgctgcatat
gataaaaccccaaaagcatttctttttttttttcctagtccatatacaag
aaaattttgtttgttttcttaattgggagtaaactaagccaatgggaaga
actcactagctaaccttgaactccctcactgagctgagaacctgtgacag
aatgaagcacattgtcatgagaaccacagacagaatgagagaccaggata
actctgctgcctccctttcccttgctcagagtatggagtcagagatgtac
ctaaacctcctggaaggcctgagccacgcaagcagggcttgcaagtaaag
aactcgtctgacctgcctccctggcgagccgtgatctattactaatatct
tgggtgtgttgaacccaaaagtcctggcctgggttcagcctgctccagca
gctccatgctccccaaaagctcacaagattcatgactggttctacagaga
taaagagctacaggatccagatgggacatagagtatcttttagagatgtt
tattctctatagtacttgcccgagagcaacccaggttaggaacagcctct
gattccttaacaagagaagaaatcaattaaattgctctagaatttgggac
ctgaacttaaaatatttatttatacttttctctcagtatgttttagataa
gaagcctaaagcttgcagtttggggctggagagatagcttggtggtaaag
aacacccctcaggtagacagagttgagcttcagaagtcagtctgacattt
tgcagaagctgtactccactaggagaatgtgagccctctttctgaccttg
gcactgtatctttcatgttaaccacctaccagacctgcccactataaaat
tagggaaagactcttttaatgc
gaattctagtctgtgaagggaacattggcttaagccctcacgtggcctag
catttcttctcttcagtagcaccacatcacagaagaaaaatgtacgggag
cgcaagaacaatcagcaatctggaaggcagcccttccaggtcaccacgtc
tgccaaggtctcctcgtttgggccaccgaagaacaagcagtgggggaggg
ggagggacaggcaagactctgtctatggagaatatccagtcccttaatgc
agcctatgctacgtctggacccatgtacttgagtgaccatgaaggggtgg
catcgacaacttacccaaagggaaccatgactctgggcagggcgacaaat
cgagcggtgtatggaggccgggtcacagccatggggagtagtcccaacat
tgcttccgctggactttcccacacggatgtcctttcctatacggatcaac
atggagggctgagcggctcatcccaccaccaccaccaccaggtgccctcc
atgttgaggcaggtaagagacagcacgatgttggatcttcaagcccagct
caaagagctgcagagagagaatgacctcctacgcaaggagcttgacatta
aggacagcaaactggggtcttccatgaacagcatcaagactttctggagt
cctgagctgaagaaggagagagtcttgaggaaagaggaggcagctcgcat
gtctgtcctcaaggagcagatgagggttttctcacgaagaaaaccaggta
ggtttctgacctgccccaatggtctcagaattgcaagtggtttcagattt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28629798_28631028
seq2: B6Ng01-089F02.b_47_1268 (reverse)

seq1  GCATTTTAAAGAGTCTTTCCCTTAATTTTTATATGTGTGCATGTCTTGTG  50
      ||| || |||||||||||||||  | ||||||| ||| ||| ||||   |
seq2  GCA-TTAAAAGAGTCTTTCCCT--AATTTTATA-GTGGGCAGGTCT--GG  44

seq1  TAGGTTGGTGTACATGTAAG-TACAGTGCCCAAAGAGGCCAG-AAGAGGG  98
      |||| ||||  ||||| ||| |||||||||     ||| ||| |||||||
seq2  TAGG-TGGTTAACATGAAAGATACAGTGCC----AAGGTCAGAAAGAGGG  89

seq1  CTTACAATCTCCTAGTGGAGTTACAGGTTCTTGCAAATTGTCTGACATGG  148
      || ||| ||||||||||||| ||||| ||| |||||| |||| ||| || 
seq2  CTCACATTCTCCTAGTGGAG-TACAGCTTC-TGCAAAATGTCAGAC-TGA  136

seq1  CTTCTGGAAGCTCAACTCTGGTCTACCTGA--GGTGTCTCTAACCACCAA  196
      ||||| ||||||||||||| ||||||||||  |||||   | ||||||||
seq2  CTTCT-GAAGCTCAACTCT-GTCTACCTGAGGGGTGTTCTTTACCACCAA  184

seq1  GCTATCTCTCCAGCCCCAAACTGCAAGCTTTAGGCTTCTTTATCTTAAAC  246
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GCTATCTCTCCAGCCCCAAACTGCAAGCTTTAGGCTTC-TTATCTAAAAC  233

seq1  ATACTTGAGAGAAAAGTAT-AATAAATATTTT-AGTTCAGGT-CCAAATT  293
      |||| |||||||||||||| |||||||||||| ||||||||| |||||||
seq2  ATAC-TGAGAGAAAAGTATAAATAAATATTTTAAGTTCAGGTCCCAAATT  282

seq1  CTAGAGCAATTTAATTGATTTC-TCTCTTGTTAAGGAATCAGAGGCTGTT  342
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTAGAGCAATTTAATTGATTTCTTCTCTTGTTAAGGAATCAGAGGCTGTT  332

seq1  CCTAACCTGGGTTGCTCTC-GGCAAGTACTATAGAGAATAAACATCTCTA  391
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTAACCTGGGTTGCTCTCGGGCAAGTACTATAGAGAATAAACATCTCTA  382

seq1  AAAGATACTCTATGTCCCATCTGGATCCTGTAGCTCTTTATCTCTGTAGA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACTCTATGTCCCATCTGGATCCTGTAGCTCTTTATCTCTGTAGA  432

seq1  ACCAGTCATGAATCTTGTGAGCTTTTGGGGAGCATGGAGCTGCTGGAGCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCATGAATCTTGTGAGCTTTTGGGGAGCATGGAGCTGCTGGAGCA  482

seq1  GGCTGAACCCAGGCCAGGACTTTTGGGTTCAACACACCCAAGATATTAGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAACCCAGGCCAGGACTTTTGGGTTCAACACACCCAAGATATTAGT  532

seq1  AATAGATCACGGCTCGCCAGGGAGGCAGGTCAGACGAGTTCTTTACTTGC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCACGGCTCGCCAGGGAGGCAGGTCAGACGAGTTCTTTACTTGC  582

seq1  AAGCCCTGCTTGCGTGGCTCAGGCCTTCCAGGAGGTTTAGGTACATCTCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGCTTGCGTGGCTCAGGCCTTCCAGGAGGTTTAGGTACATCTCT  632

seq1  GACTCCATACTCTGAGCAAGGGAAAGGGAGGCAGCAGAGTTATCCTGGTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCATACTCTGAGCAAGGGAAAGGGAGGCAGCAGAGTTATCCTGGTC  682

seq1  TCTCATTCTGTCTGTGGTTCTCATGACAATGTGCTTCATTCTGTCACAGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCTGTCTGTGGTTCTCATGACAATGTGCTTCATTCTGTCACAGG  732

seq1  TTCTCAGCTCAGTGAGGGAGTTCAAGGTTAGCTAGTGAGTTCTTCCCATT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCTCAGTGAGGGAGTTCAAGGTTAGCTAGTGAGTTCTTCCCATT  782

seq1  GGCTTAGTTTACTCCCAATTAAGAAAACAAACAAAATTTTCTTGTATATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTTTACTCCCAATTAAGAAAACAAACAAAATTTTCTTGTATATG  832

seq1  GACTAGGAAAAAAAAAAAGAAATGCTTTTGGGGTTTTATCATATGCAGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGAAAAAAAAAAAGAAATGCTTTTGGGGTTTTATCATATGCAGCA  882

seq1  GACTAGAAGCTCAGGCCCAACTGCTTGTCCTTGCCCTTCTAGCCTGGATG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAGCTCAGGCCCAACTGCTTGTCCTTGCCCTTCTAGCCTGGATG  932

seq1  GCAACCTGGGAGGGTTCGACAAATCACATTGGCATGGTGATAACTCCTTC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGGGAGGGTTCGACAAATCACATTGGCATGGTGATAACTCCTTC  982

seq1  AGTAACTATGCATTTGTTCCTTCTACTTTGTGACTTACAAACCCACCTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTATGCATTTGTTCCTTCTACTTTGTGACTTACAAACCCACCTTT  1032

seq1  GCTGGAGTGCATGGGTCTGAGGAGAGAAAGACAGGAGCCATTTGCATAGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGTGCATGGGTCTGAGGAGAGAAAGACAGGAGCCATTTGCATAGT  1082

seq1  GTGCTATTCATAAAAGCTCCTGCCATCTTAGGACTTCCACTGGATAAAGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATTCATAAAAGCTCCTGCCATCTTAGGACTTCCACTGGATAAAGA  1132

seq1  GTTGTTAAAACTCACATGTACATCGTGACTTCCAAAGAAAGAAAATCAAA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAAAACTCACATGTACATCGTGACTTCCAAAGAAAGAAAATCAAA  1182

seq1  ACACCCTCTTGTGTGAAAATTTCCATTTCTTAGGGAATTC  1231
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTCTTGTGTGAAAATTTCCATTTCTTAGGGAATTC  1222

seq1: chr14_28465924_28466721
seq2: B6Ng01-089F02.g_72_871

seq1  GAATTCTAGTCTGTGAAGGGAACATTGGCTTAAGCCCTCACGTGGCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTCTGTGAAGGGAACATTGGCTTAAGCCCTCACGTGGCCTAG  50

seq1  CATTTCTTCTCTTCAGTAGCACCACATCACAGAAGAAAAATGTACGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCTCTTCAGTAGCACCACATCACAGAAGAAAAATGTACGGGAG  100

seq1  CGCAAGAACAATCAGCAATCTGGAAGGCAGCCCTTCCAGGTCACCACGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGAACAATCAGCAATCTGGAAGGCAGCCCTTCCAGGTCACCACGTC  150

seq1  TGCCAAGGTCTCCTCGTTTGGGCCACCGAAGAACAAGCAGTGGGGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGTCTCCTCGTTTGGGCCACCGAAGAACAAGCAGTGGGGGAGGG  200

seq1  GGAGGGACAGGCAAGACTCTGTCTATGGAGAATATCCAGTCCCTTAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGACAGGCAAGACTCTGTCTATGGAGAATATCCAGTCCCTTAATGC  250

seq1  AGCCTATGCTACGTCTGGACCCATGTACTTGAGTGACCATGAAGGGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATGCTACGTCTGGACCCATGTACTTGAGTGACCATGAAGGGGTGG  300

seq1  CATCGACAACTTACCCAAAGGGAACCATGACTCTGGGCAGGGCGACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGACAACTTACCCAAAGGGAACCATGACTCTGGGCAGGGCGACAAAT  350

seq1  CGAGCGGTGTATGGAGGCCGGGTCACAGCCATGGGGAGTAGTCCCAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCGGTGTATGGAGGCCGGGTCACAGCCATGGGGAGTAGTCCCAACAT  400

seq1  TGCTTCCGCTGGACTTTCCCACACGGATGTCCTTTCCTATACGGATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCGCTGGACTTTCCCACACGGATGTCCTTTCCTATACGGATCAAC  450

seq1  ATGGAGGGCTGAGCGGCTCATCCCACCACCACCACCACCAGGTGCCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGCTGAGCGGCTCATCCCACCACCACCACCACCAGGTGCCCTCC  500

seq1  ATGTTGAGGCAGGTAAGAGACAGCACGATGTTGGATCTTCAAGCCCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGGCAGGTAAGAGACAGCACGATGTTGGATCTTCAAGCCCAGCT  550

seq1  CAAAGAGCTGCAGAGAGAGAATGACCTCCTACGCAAGGAGCTTGACATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCTGCAGAGAGAGAATGACCTCCTACGCAAGGAGCTTGACATTA  600

seq1  AGGACAGCAAACTGGGGTCTTCCATGAACAGCATCAAGACTTTCTGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCAAACTGGGGTCTTCCATGAACAGCATCAAGACTTTCTGGAGT  650

seq1  CCTGAGCTGAAGAAGGAGAGAGTCTTGAGGAAAGAGGAGGCAGCTCGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCTGAAGAAGGAGAGAGTCTTGAGGAAAGAGGAGGCAGCTCGCAT  700

seq1  GTCTGTCCTCAAGGAGCAGATGAGGG-TTTCTCACGAAGAAAACCAGGTA  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTCTGTCCTCAAGGAGCAGATGAGGGTTTTCTCACGAAGAAAACCAGGTA  750

seq1  GG-TTCTGACCTGCCCCAGTGTTCTCAGATTTGCAGGTGGCTCCAGATTT  798
      || ||||||||||||||| || ||||||| ||||| |||| | |||||||
seq2  GGTTTCTGACCTGCCCCAATGGTCTCAGAATTGCAAGTGGTTTCAGATTT  800