BAC Information

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BAC

Clone NameB6Ng01-089L23
Chromosome14 (Build37)
Map Location 46,497,844 - 46,699,165
singlet/doubletdoublet
Overlap geneLOC100041685, LOC625377
Upstream genePtger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834
Downstream geneLOC218963, LOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1, Samd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089L23.bB6Ng01-089L23.g
ACCDH902244DH902245
length1,1321,106
definitionDH902244|Mus musculus domesticus DNA, BAC clone: B6Ng01-089L23, 5' end.DH902245|Mus musculus domesticus DNA, BAC clone: B6Ng01-089L23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,698,026 - 46,699,165)(46,497,844 - 46,498,937)
sequence
gaattcaattcttaaacttcatttgagctattcaagaagtaaactctact
tccaatgactaattccatgatgaaggaagtctaaagtttgagttcaccac
ttagagacaaaattgaatcactgctgagaaagaagagcctacataggtag
aacaaagtggtaagagctgattcttgacctacactatacccaaaggcaga
gttgtggactttatccagtttgggaaccaatgacaccaattttgcttaaa
gtgattgatttagactttttgtcacattcagacagagagatcctaagagt
tttagtgaatgggtgaaactgtcctaaaatctgagctatagtgcatgata
actaagccaataagcactctggctagtacacacactacattcttctagct
cattctttagcacattcacttccatcccagcctttcctgtgtgaaatagc
atgcagtcatggctctaggccatttcatcttgtctcccaaacaaccttta
aagctatttctcatcactaatatcttagtgataccttatgtaatatctta
gcccactagaagccttgcatgacttaaaacatttctccatatagaaagga
aaagtttacatctcaggataaccattcagaagtggcaaagttaatatgtt
tctgaggaaaaaaaaagagaaatttttatgattgtactatattctggctc
acagcattgcagtttttctatcttgacattagggaagaaacaagatgtgc
ttaagagagagccctcgatttcagaactgagcagtttttgtgcccgtcac
accaatcactgagtcttgatgtgcccacctgccttgtgtggatttttaca
ataatcaccaagagactatgaatgaaaaattctttgttacttttttaaaa
aataatgtctcatttcctaaatgtgacaatgagagaagaaaaaacctctt
ggcttagctatgtggactttatttttatcacttaactacatgtctcgtct
gatcataacattggagtgaaaggggacatttcaatcagcatttctttggc
gcaaagtgtgtactacagttcaaacaagaagccagtcttcaagttgctag
ctagagtggctcaaagtaaactaataaacaaa
gaattcagaggcagttgtgtttgactccagaatctgatggtccccagatg
acaggttaacttttttgactagtaaaaataaaggggaaggggaagagagc
tcttccttccttcctccctccctccctccctccctccttcgctcctttcc
ttccttctcaccttaaaggggagaagagaagaataacgagaaccaaggaa
gatgagaccatgtgatcacgacaaaacgattagggcggagttaaatgact
ggggactcaaaggggtgaacacctctgccaaaatagctcctgaagcagga
aaggtggaaaaaaggagtcgggtgagtgagttcctcttttcaccactagg
tgacaccattgacgcctcacctgctgtcgggaggaggtgcgtttaggagg
aatctgtagagcaactccacagtggacccccgaagcagtgaaaactgatt
tcacttacatagtcttactgagaaaggaatccaaaggggcaggaggcacc
tgcttcggtctttatgtaaatcattgccacgtctcccaaatatctactcc
acgtgatgtcagggtaagggactgagcgggagaatctggagcctggcttc
ttaggtttgtagtctgtcactattaggagtcaagtcactggcctaagact
tctgaacctcatagcttttcttctatgtgaacgtgagggagcagcatcta
cctttagagatgtcatatgaggaaggtgggggaggaagtgacaggtataa
agccacctttgttatggttgtttggtgagagctcaaaacttcacaaacag
taacagagagactctccagctcaaagaataagatttcttttgctttggtt
gaatggaaaacaataccctgtcagattataagccacattgtctcctcctt
tttactttaaaggaaaatgcttctatcttggatattttgcttaatatcac
atacattattcatagctgactccgaaaaagggttcagatggatgaaatta
atttccgatgggtattcagctcccttctggagtttttgcgccctccaatt
ttccctgcccattgctctctcttggaccctctcccctctccccagagcca
attctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_46698026_46699165
seq2: B6Ng01-089L23.b_51_1182 (reverse)

seq1  TTTGTTTTATTAGTTTTACTTGTGAGCCACTTCTAGCTAGCCAACTTGGA  50
      |||| |||||||| ||||||| |||||||| ||||||||| |||||| ||
seq2  TTTG-TTTATTAG-TTTACTT-TGAGCCAC-TCTAGCTAG-CAACTT-GA  44

seq1  GGACTGGGCTCTTGGTTGAACCTGTAGTACACACTTTTGCGCC-AAGAAA  99
       ||||||  ||||| ||||| ||||||||||||| |||||||| ||||||
seq2  AGACTGGCTTCTTGTTTGAA-CTGTAGTACACAC-TTTGCGCCAAAGAAA  92

seq1  TGGCTGATTGAAATGGTCCCCTTTTCACT-CAATGTTATGATCAGACGAG  148
      | |||||||||||| |||||| ||||||| ||||||||||||||||||| 
seq2  T-GCTGATTGAAAT-GTCCCC-TTTCACTCCAATGTTATGATCAGACGA-  138

seq1  GACCAATGTAGTTAAGTGATAAAAATAAAGTCCACATAGCTAAGCCAAGA  198
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAC--ATGTAGTTAAGTGATAAAAATAAAGTCCACATAGCTAAGCCAAGA  186

seq1  GGTTTTT--CTCTCTCAATGTCACATTTAGGAAATGAGACATTATTTTTA  246
      |||||||   ||||||| ||||||||||||||||||||||||||||||| 
seq2  GGTTTTTTCTTCTCTCATTGTCACATTTAGGAAATGAGACATTATTTTTT  236

seq1  AAAAAAGTAAC-AAGAATATTTCATTCATAGTCTCTTGGTGATTATTGTA  295
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  AAAAAAGTAACAAAGAATTTTTCATTCATAGTCTCTTGGTGATTATTGTA  286

seq1  AAAATCCACACAAGGCAGGTGGGCACATCAAGACTCAGTGATTGGTGTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCACACAAGGCAGGTGGGCACATCAAGACTCAGTGATTGGTGTGA  336

seq1  CGGGCACAAAAACTGCTCAGTTCTGAAATCGAGGGCTCTCTCTTAAGCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCACAAAAACTGCTCAGTTCTGAAATCGAGGGCTCTCTCTTAAGCAC  386

seq1  ATCTTGTTTCTTCCCTAATGTCAAGATAG-AAAACTGCAATGCTGTGAGC  444
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCTTGTTTCTTCCCTAATGTCAAGATAGAAAAACTGCAATGCTGTGAGC  436

seq1  CAGAATATAGTACAATCATAAAAATTTCTCTTTTTTTTTCCTCAGAAACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATAGTACAATCATAAAAATTTCTCTTTTTTTTTCCTCAGAAACA  486

seq1  TATTAACTTTGCCACTTCTGAATGGTTATCCTGAGATGTAAACTTTTCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTTTGCCACTTCTGAATGGTTATCCTGAGATGTAAACTTTTCCT  536

seq1  TTCTATATGGAGAAATGTTTTAAGTCATGCAAGGCTTCTAGTGGGCTAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATGGAGAAATGTTTTAAGTCATGCAAGGCTTCTAGTGGGCTAAG  586

seq1  ATATTACATAAGGTATCACTAAGATATTAGTGATGAGAAATAGCTTTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATAAGGTATCACTAAGATATTAGTGATGAGAAATAGCTTTAAA  636

seq1  GGTTGTTTGGGAGACAAGATGAAATGGCCTAGAGCCATGACTGCATGCTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTTGGGAGACAAGATGAAATGGCCTAGAGCCATGACTGCATGCTA  686

seq1  TTTCACACAGGAAAGGCTGGGATGGAAGTGAATGTGCTAAAGAATGAGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACAGGAAAGGCTGGGATGGAAGTGAATGTGCTAAAGAATGAGCT  736

seq1  AGAAGAATGTAGTGTGTGTACTAGCCAGAGTGCTTATTGGCTTAGTTATC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATGTAGTGTGTGTACTAGCCAGAGTGCTTATTGGCTTAGTTATC  786

seq1  ATGCACTATAGCTCAGATTTTAGGACAGTTTCACCCATTCACTAAAACTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTATAGCTCAGATTTTAGGACAGTTTCACCCATTCACTAAAACTC  836

seq1  TTAGGATCTCTCTGTCTGAATGTGACAAAAAGTCTAAATCAATCACTTTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATCTCTCTGTCTGAATGTGACAAAAAGTCTAAATCAATCACTTTA  886

seq1  AGCAAAATTGGTGTCATTGGTTCCCAAACTGGATAAAGTCCACAACTCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTGGTGTCATTGGTTCCCAAACTGGATAAAGTCCACAACTCTG  936

seq1  CCTTTGGGTATAGTGTAGGTCAAGAATCAGCTCTTACCACTTTGTTCTAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGTATAGTGTAGGTCAAGAATCAGCTCTTACCACTTTGTTCTAC  986

seq1  CTATGTAGGCTCTTCTTTCTCAGCAGTGATTCAATTTTGTCTCTAAGTGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAGGCTCTTCTTTCTCAGCAGTGATTCAATTTTGTCTCTAAGTGG  1036

seq1  TGAACTCAAACTTTAGACTTCCTTCATCATGGAATTAGTCATTGGAAGTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAAACTTTAGACTTCCTTCATCATGGAATTAGTCATTGGAAGTA  1086

seq1  GAGTTTACTTCTTGAATAGCTCAAATGAAGTTTAAGAATTGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTACTTCTTGAATAGCTCAAATGAAGTTTAAGAATTGAATTC  1132

seq1: chr14_46497844_46498937
seq2: B6Ng01-089L23.g_69_1174

seq1  GAATTCAGAGGCAGTTGTGTTTGACTCCAGAATCTGATGGTCCCCAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCAGTTGTGTTTGACTCCAGAATCTGATGGTCCCCAGATG  50

seq1  ACAGGTTAACTTTTTTGACTAGTAAAAATAAAGGGGAAGGGGAAGAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTAACTTTTTTGACTAGTAAAAATAAAGGGGAAGGGGAAGAGAGC  100

seq1  TCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCGCTCCTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCGCTCCTTTCC  150

seq1  TTCCTTCTCACCTTAAAGGGGAGAAGAGAAGAATAACGAGAACCAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTCACCTTAAAGGGGAGAAGAGAAGAATAACGAGAACCAAGGAA  200

seq1  GATGAGACCATGTGATCACGACAAAACGATTAGGGCGGAGTTAAATGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACCATGTGATCACGACAAAACGATTAGGGCGGAGTTAAATGACT  250

seq1  GGGGACTCAAAGGGGTGAACACCTCTGCCAAAATAGCTCCTGAAGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTCAAAGGGGTGAACACCTCTGCCAAAATAGCTCCTGAAGCAGGA  300

seq1  AAGGTGGAAAAAAGGAGTCGGGTGAGTGAGTTCCTCTTTTCACCACTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGAAAAAAGGAGTCGGGTGAGTGAGTTCCTCTTTTCACCACTAGG  350

seq1  TGACACCATTGACGCCTCACCTGCTGTCGGGAGGAGGTGCGTTTAGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCATTGACGCCTCACCTGCTGTCGGGAGGAGGTGCGTTTAGGAGG  400

seq1  AATCTGTAGAGCAACTCCACAGTGGACCCCCGAAGCAGTGAAAACTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAGAGCAACTCCACAGTGGACCCCCGAAGCAGTGAAAACTGATT  450

seq1  TCACTTACATAGTCTTACTGAGAAAGGAATCCAAAGGGGCAGGAGGCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTACATAGTCTTACTGAGAAAGGAATCCAAAGGGGCAGGAGGCACC  500

seq1  TGCTTCGGTCTTTATGTAAATCATTGCCACGTCTCCCAAATATCTACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCGGTCTTTATGTAAATCATTGCCACGTCTCCCAAATATCTACTCC  550

seq1  ACGTGATGTCAGGGTAAGGGACTGAGCGGGAGAATCTGGAGCCTGGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGATGTCAGGGTAAGGGACTGAGCGGGAGAATCTGGAGCCTGGCTTC  600

seq1  TTAGGTTTGTAGTCTGTCACTATTAGGAGTCAAGTCACTGGCCTAAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTGTAGTCTGTCACTATTAGGAGTCAAGTCACTGGCCTAAGACT  650

seq1  TCTGAACCTCATAGC-TTTCTTCTATGTGAACGTGAGGGAGCAGCATCTA  699
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTGAACCTCATAGCTTTTCTTCTATGTGAACGTGAGGGAGCAGCATCTA  700

seq1  CC-TTAGAGATGTCATATGAGGAAGGT-GGGGAGGAAGTGACAGGTATAA  747
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTTTAGAGATGTCATATGAGGAAGGTGGGGGAGGAAGTGACAGGTATAA  750

seq1  AGCCACCTTTGTTAT-GTTGTTAGGTGAGAGCTCAAAACTTCACAAACAG  796
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  AGCCACCTTTGTTATGGTTGTTTGGTGAGAGCTCAAAACTTCACAAACAG  800

seq1  TAACAGAGAGACTCTCCAGCTCAAAGAATAGGATTTCTTTTGCTTTTGTT  846
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  TAACAGAGAGACTCTCCAGCTCAAAGAATAAGATTTCTTTTGCTTTGGTT  850

seq1  GAAT-GCAAACAATACCCTGTCAGATTATAAG-CACATTG-CTCC-CCCT  892
      |||| | ||||||||||||||||||||||||| ||||||| |||| || |
seq2  GAATGGAAAACAATACCCTGTCAGATTATAAGCCACATTGTCTCCTCCTT  900

seq1  TTTACTTTAAA-GAAAATGC-TCTATCTTTGCATATTTTGCTTATTAATC  940
      ||||||||||| |||||||| |||||| ||| |||||||||||| | |||
seq2  TTTACTTTAAAGGAAAATGCTTCTATC-TTGGATATTTTGCTTAAT-ATC  948

seq1  ACATACATTATTCATAGCTGACTCCAGAAAAAAGGTTCAAGAT-GATGAA  989
      ||||||||||||||||||||||||| |||||| ||||| |||| ||||||
seq2  ACATACATTATTCATAGCTGACTCC-GAAAAAGGGTTC-AGATGGATGAA  996

seq1  ATTAATTTCCGATGGTGTA-TCAGCTCCCATCT-GAGTTTTTGCG-CCTC  1036
      ||||||||||||||| ||| ||||||||| ||| ||||||||||| ||||
seq2  ATTAATTTCCGATGG-GTATTCAGCTCCCTTCTGGAGTTTTTGCGCCCTC  1045

seq1  CCACTTTCCTTCCCCATTG-TCTTCCTTGG-CCCTCTCCCCTCTCCCCAG  1084
      | | ||||| | ||||||| |||  ||||| |||||||||||||||||||
seq2  CAATTTTCCCTGCCCATTGCTCTCTCTTGGACCCTCTCCCCTCTCCCCAG  1095

seq1  -GCTAATTCTG  1094
       || |||||||
seq2  AGCCAATTCTG  1106