BAC Information

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BAC

Clone NameB6Ng01-091H18
Chromosome14 (Build37)
Map Location 101,648,097 - 101,649,221
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043413, EG668683, EG668684, 1700110M21Rik, LOC100043421
Downstream geneLOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091H18.b
ACCDH903497
length1,115
definitionDH903497|Mus musculus domesticus DNA, BAC clone: B6Ng01-091H18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttatctgatagtgctgtttttttattgtttctgtaatagatc
tgatcatattctcattttttgtttcttgactagcttttaaatgtcagtat
tcaccaggattccatattcagccatcttgataatggctggattctgatga
tcaatgtagttacaacttggttgcaacaatgagttagacaatatctggca
tttattattcttccaataaacagtagttataacacctcttcaacttcatc
tctcaccacctatggccacaaaaactcatatgccaatacacagaacagag
tgtatactttcagatgtgtcttaatatttctgcagacattgtcttcctcc
tgaaatcccttggcctctcacccaagaattttacagaacatttcaacacc
tgttaagtatgaccttctccttgaagcctttctagatctcccgtcagaat
ctcactctagtcaacagattacattgttgcttccataaaataagtgcttt
atgtcttaagtaacagtgtggcctctgtaaaagctagggctttggtttac
acattccatctaagaagtccattcaaaggaaagccagacaatcaaaggat
ttaaaatatgattctgatttgaatttactgctttccatatataattgcta
tatattttatagtccatgaaagcacttctgcaaaacttttaaaaaaatgc
ttctttataatttttagtgacccttgagaaattcactcgttaaaccccct
gatactctcccactcagcccacatacattgtgtttccagctttataattt
taaggttggtttaaccacctaactcttttttcttcatgaacacattcttg
attctgcattttccaaacttgagaagctctctggagaggagaactgttca
gatgtcacgggatgagtagcatgagagtagggtagagagcagctaatgat
acccatacaagagaactaaatcatcacagcgttaactgggatttcttcct
cttctttgaaatggcaccacaagaatacatttggtccttgtaccctcaat
gcacataattcatgcactgtttggtgcaaactgttttatgctcgagatta
tgaaaaatgatgcta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101648097_101649221
seq2: B6Ng01-091H18.b_47_1161

seq1  GAATTCTTTTATCTGATAGTGCTGTTTTTTTATTGTTTCTGTAATAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATCTGATAGTGCTGTTTTTTTATTGTTTCTGTAATAGATC  50

seq1  TGATCATATTCTCATTTTTTGTTTCTTGACTAGCTTTTAAATGTCAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATATTCTCATTTTTTGTTTCTTGACTAGCTTTTAAATGTCAGTAT  100

seq1  TCACCAGGATTCCATATTCAGCCATCTTGATAATGGCTGGATTCTGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGATTCCATATTCAGCCATCTTGATAATGGCTGGATTCTGATGA  150

seq1  TCAATGTAGTTACAACTTGGTTGCAACAATGAGTTAGACAATATCTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAGTTACAACTTGGTTGCAACAATGAGTTAGACAATATCTGGCA  200

seq1  TTTATTATTCTTCCAATAAACAGTAGTTATAACACCTCTTCAACTTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTCTTCCAATAAACAGTAGTTATAACACCTCTTCAACTTCATC  250

seq1  TCTCACCACCTATGGCCACAAAAACTCATATGCCAATACACAGAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCACCTATGGCCACAAAAACTCATATGCCAATACACAGAACAGAG  300

seq1  TGTATACTTTCAGATGTGTCTTAATATTTCTGCAGACATTGTCTTCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTTTCAGATGTGTCTTAATATTTCTGCAGACATTGTCTTCCTCC  350

seq1  TGAAATCCCTTGGCCTCTCACCCAAGAATTTTACAGAACATTTCAACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCCTTGGCCTCTCACCCAAGAATTTTACAGAACATTTCAACACC  400

seq1  TGTTAAGTATGACCTTCTCCTTGAAGCCTTTCTAGATCTCCCGTCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGTATGACCTTCTCCTTGAAGCCTTTCTAGATCTCCCGTCAGAAT  450

seq1  CTCACTCTAGTCAACAGATTACATTGTTGCTTCCATAAAATAAGTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTAGTCAACAGATTACATTGTTGCTTCCATAAAATAAGTGCTTT  500

seq1  ATGTCTTAAGTAACAGTGTGGCCTCTGTAAAAGCTAGGGCTTTGGTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAAGTAACAGTGTGGCCTCTGTAAAAGCTAGGGCTTTGGTTTAC  550

seq1  ACATTCCATCTAAGAAGTCCATTCAAAGGAAAGCCAGACAATCAAAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCATCTAAGAAGTCCATTCAAAGGAAAGCCAGACAATCAAAGGAT  600

seq1  TTAAAATATGATTCTGATTTGAATTTACTGCTTTCCATATATAATTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATGATTCTGATTTGAATTTACTGCTTTCCATATATAATTGCTA  650

seq1  TATATTTTATAGTCCATGAAAGCACTTCTGCAAAACTTTTAAAAAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATAGTCCATGAAAGCACTTCTGCAAAACTTTTAAAAAAATGC  700

seq1  TTCTTTATAATTTTTAGTGACCCTTGAGAAATTCACTCGTTAAACCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATAATTTTTAGTGACCCTTGAGAAATTCACTCGTTAAACCCCCT  750

seq1  GATACTCTCCCACTCAGCCCACATACATTGTGTTTCCAGCTTTATAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCTCCCACTCAGCCCACATACATTGTGTTTCCAGCTTTATAATTT  800

seq1  TAAGGTTGGTTTAACCACCTAACTCTTTTTCCTTCATGAACACATTCTTG  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAGGTTGGTTTAACCACCTAACTCTTTTTTCTTCATGAACACATTCTTG  850

seq1  ATTCTGCATTTTCCAAACTTGAGAAGCTCTCTGGAGAGGAGAACTGTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCATTTTCCAAACTTGAGAAGCTCTCTGGAGAGGAGAACTGTTCA  900

seq1  GATGTCACGGGATGAGTAGCATGAGAGTAGGGTAGAGAGCAAGCTAATGA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATGTCACGGGATGAGTAGCATGAGAGTAGGGTAGAGAGC-AGCTAATGA  949

seq1  TACCCATACAAGAGAACTAAAATCATCACAGCGTTAACCTGGGATTTCTT  1000
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  TACCCATACAAGAGAACT-AAATCATCACAGCGTTAA-CTGGGATTTCTT  997

seq1  CCTCTTCCTTTGAAATGGCACCACAAG-ATACATTTGGTCCTTTGTACCC  1049
      |||||| |||||||||||||||||||| ||||||||||||| ||||||||
seq2  CCTCTT-CTTTGAAATGGCACCACAAGAATACATTTGGTCC-TTGTACCC  1045

seq1  TCAAATGCACATAATTCATGCATCTGTTT-GTGCAACATGTTTTATGCAT  1098
      || ||||||||||||||||||| |||||| ||||||  |||||||||| |
seq2  TC-AATGCACATAATTCATGCA-CTGTTTGGTGCAAACTGTTTTATGC-T  1092

seq1  CAGAGATTATAGAAAAATGAAATGCTA  1125
      | |||||||| ||||||||  ||||||
seq2  C-GAGATTAT-GAAAAATG--ATGCTA  1115