BAC Information

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BAC

Clone NameB6Ng01-091N05
Chromosome14 (Build37)
Map Location 51,783,543 - 51,847,453
singlet/doubletdoublet
Overlap geneEar-ps1, Ang2, Ear14
Upstream geneOlfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5
Downstream geneEar11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091N05.bB6Ng01-091N05.g
ACCDH903750DH903751
length990375
definitionDH903750|Mus musculus domesticus DNA, BAC clone: B6Ng01-091N05, 5' end.DH903751|Mus musculus domesticus DNA, BAC clone: B6Ng01-091N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,846,831 - 51,847,453)(51,783,543 - 51,783,922)
sequence
gaattctctcctatggagaggaccttaaatccaattgtaaagttactgac
tgttcctctaatagtccatgccactattgtatcagctgacacatcttatt
ctcattcatattcattatcatattttctctctctctctgtctctctctgt
ctttctgtctctgtctctctctctgtctctctctgtctctctctctcttg
gttttttgagacacactttctttatagcactggatgtcctggaactcact
ctgtagaccaggctggcctcaatctcagaaatgaacatacttctgcctcc
caagtgctgggattaaaggcatacactaccactgcctggctcagttggca
catcgtacccaaataggtcagtaatgtagtgcacagggtccacagccaag
caggactgctgacaacaattctcctccagcattcagaatagatagcatct
ctggtgctatgaatatcagtcaagaggaaaggagtttctagctcagtccc
atttttttttccatgtcctataaccaaagtatgtggtgccttcagcaata
aggtcctatcattatctctgctatccaactatatcagcaatagtttttat
tgtttggggggcatctggtacatctctgaccaacaattcataaggagtta
atccaacactagcactgagattatcaattaaaaactacatggctttttgg
caccccttttcttgctcaatgttaagatgcctgcctaagggaggaagcat
tatttttcccatggttgtttgagattctggtcacagtacttgtctctgtt
gttactgggcccatagacaataaaagacagtggtgaaagcaggtagatga
tgtggctatgacctcatagttgacaggaagcacagcacaccgagggggcc
cagggactggtccccatggacacaccttctgtaacctactctctcactag
gtatgctccacgtcctccttttcaccaccagattatgact
caaacccagggtcagctcaaggtattggtgaaggccaggaagcaaagttc
aattttgcttaggtatttagcaagtcgttgcttggaggcacctgtaacaa
aaccatactgaaagaaagcacacagatccattcgcaaggacaagtttgga
gcattcgttatacgggatgccacgtttccaggagattaagtttccgtgaa
cttttcacctctggactgtgtccaggtttctagtcctgtcacacgagtca
ctactggaatgggcttagcatctgtatctgacaagggtggggagagagga
agggggagagacaaacacagagacaattgtgtgtgtgtgtgtgtgttcgt
gtgtttttttcttgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51846831_51847453
seq2: B6Ng01-091N05.b_48_670 (reverse)

seq1  ATGTACCAGATGCCCCCCAAACAATAAAAACTATTGCTGATATAGTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCAGATGCCCCCCAAACAATAAAAACTATTGCTGATATAGTTGGA  50

seq1  TAGCAGAGATAATGATAGGACCTTATTGCTGAAGGCACCACATACTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGATAATGATAGGACCTTATTGCTGAAGGCACCACATACTTTGG  100

seq1  TTATAGGACATGGAAAAAAAAATGGGACTGAGCTAGAAACTCCTTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGACATGGAAAAAAAAATGGGACTGAGCTAGAAACTCCTTTCCTC  150

seq1  TTGACTGATATTCATAGCACCAGAGATGCTATCTATTCTGAATGCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGATATTCATAGCACCAGAGATGCTATCTATTCTGAATGCTGGAG  200

seq1  GAGAATTGTTGTCAGCAGTCCTGCTTGGCTGTGGACCCTGTGCACTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGTTGTCAGCAGTCCTGCTTGGCTGTGGACCCTGTGCACTACAT  250

seq1  TACTGACCTATTTGGGTACGATGTGCCAACTGAGCCAGGCAGTGGTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACCTATTTGGGTACGATGTGCCAACTGAGCCAGGCAGTGGTAGTG  300

seq1  TATGCCTTTAATCCCAGCACTTGGGAGGCAGAAGTATGTTCATTTCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTTAATCCCAGCACTTGGGAGGCAGAAGTATGTTCATTTCTGAG  350

seq1  ATTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACATCCAGTGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACATCCAGTGCTAT  400

seq1  AAAGAAAGTGTGTCTCAAAAAACCAAGAGAGAGAGAGACAGAGAGAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTGTGTCTCAAAAAACCAAGAGAGAGAGAGACAGAGAGAGACA  450

seq1  GAGAGAGAGACAGAGACAGAAAGACAGAGAGAGACAGAGAGAGAGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGACAGAAAGACAGAGAGAGACAGAGAGAGAGAGAAA  500

seq1  ATATGATAATGAATATGAATGAGAATAAGATGTGTCAGCTGATACAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATAATGAATATGAATGAGAATAAGATGTGTCAGCTGATACAATAG  550

seq1  TGGCATGGACTATTAGAGGAACAGTCAGTAACTTTACAATTGGATTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGACTATTAGAGGAACAGTCAGTAACTTTACAATTGGATTTAAG  600

seq1  GTCCTCTCCATAGGAGAGAATTC  623
      |||||||||||||||||||||||
seq2  GTCCTCTCCATAGGAGAGAATTC  623

seq1: chr14_51783543_51783922
seq2: B6Ng01-091N05.g_69_449

seq1  GAATTCCAAACCCAGGGTCAGCTCAAGGTATTGGTGAAGGCCAGGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCCAGGGTCAGCTCAAGGTATTGGTGAAGGCCAGGAAGCA  50

seq1  AAGTTCAATTTTGCTTAGGTATTTAGCAAGTCGTTGCTTGGAGGCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAATTTTGCTTAGGTATTTAGCAAGTCGTTGCTTGGAGGCACCTG  100

seq1  TAACAAAACCATACTGAAAGAAAGCACACAGATCCATTCGCAAGGACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAACCATACTGAAAGAAAGCACACAGATCCATTCGCAAGGACAAG  150

seq1  TTTGGAGCATTCGTTATACGGGATGCCACGTTTCCAGGAGATTAAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGCATTCGTTATACGGGATGCCACGTTTCCAGGAGATTAAGTTTC  200

seq1  CGTGAACTTTTCACCTCTGGACTGTGTCCAGGTTTCTAGTCCTGTCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAACTTTTCACCTCTGGACTGTGTCCAGGTTTCTAGTCCTGTCACAC  250

seq1  GAGTCACTACTGGAATGGGCTTAGCATCTGTATCTGACAAGGGTGGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACTACTGGAATGGGCTTAGCATCTGTATCTGACAAGGGTGGGGAG  300

seq1  AGAGGAAGGGGGAGAGACAAACACAGAGACAATTGTGTGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGGGGAGAGACAAACACAGAGACAATTGTGTGTGTGTGTGTGT  350

seq1  GTTCGTGTG-CGTGTGCCTGTGTGTGTGTGT  380
      |||||||||   | | | |||||||||||||
seq2  GTTCGTGTGTTTTTTTCTTGTGTGTGTGTGT  381