BAC Information

Click to search

BAC

Clone NameB6Ng01-092E08
Chromosome14 (Build37)
Map Location 107,075,840 - 107,179,256
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneLOC668752, EG668754
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E08.bB6Ng01-092E08.g
ACCDH904078DH904079
length1,0271,154
definitionDH904078|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E08, 5' end.DH904079|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,178,741 - 107,179,256)(107,075,840 - 107,077,018)
sequence
gaattctgatcccagacaggagttccgagaaagagatgggagagagaaat
agagcacggctagaagaaggtatagaaagaccatgaagaagaaccaggaa
gattcaccatgatatcccaatgagagagcaactaaaaggacaagggcagg
gcaagactcagatgcaggtacagcaccatttgcctgggtagtagcagcct
agtcaggttagaatagctaaagaacctgaccagatattagtgcttacagc
ttgttaataacagtaccaggtctctgtgtctttattcaggagctaaaatg
ggctacattgggcatagaaacaccctgcagttatttgggtgcaaaagggg
aaaaaaaaccctgcagaactatacttacagaaagctatttcataatccct
agcagagaggcaatagttattattttgtgaatggacataatcttaaatga
ttgctaaggatttgttattcacaaaaaataatgcaactttcaattttcat
gacagaaggttctatttgcagtagatgaggattaacacagagactcacaa
agggtttaagtacatagattaatattctccagaatgctcagccctaaagg
gaacatgtatattttcccacatgtttccaaggtccaggtatttttatgga
agaggtggatgggactggtgtaagaggaggtagattactccaagaaaaat
tttcttctgggcatcaacatcatagctaaacatatgatctcatagtggtt
gtaacagtatgtaaaaatcctgtgcaaatccgggccttgtcaaataccat
cattaacaggagtgccagtaaaaccacacaagcccaatcctggtcatgta
acttaaacaagcgttttaactgctaggagacagaatcagataatggcaga
gtctgtcccctcataaggcatatttcttcagtcggagaacacacacccag
gatgtttgggcagcacacatggctttggaggaaaaacagaatcatttgga
ggtggtggtgagtaggttgggttggga
gaattcaaatacagcttgttatagaaggcatctcatttttctcaagtcac
aatataatatatctatatataatatgttaaaatataattaatatattata
tatatgattatataatatattgtatctccaatatatttcacacacacata
tgtattcccattttctcatagccattaaattccaaaaggttttctagtaa
attattataatatcctcaggatattgttaatctattttatactacttgtc
cataatgtttattgaccttctttttcaatcttcaaaagttttgttttcat
ttatttttttttgacgcagggtataattctgtagttcacgttctcctggg
actcactgtatagacaggctggttccaactttgttatcattcatgtgctt
tggggtcatgaagagaggggatattggtcggggatattgtactgtgattt
aatattgtgtttatgcaactacttcataaggggctctgtcttttcctgac
actgaattcagggtttcctgtctgacatgctttatccaatagaatgaatc
tatacactgttagttattgtaggcttaaacataaagtaatatagaatgaa
tatatatactgttagttattgtaggcttaaatataaagtaatatagaatg
aatctatatactgttagttattataggcttaaatataaagtaatatagaa
tgaatctatatactgttagttattgtacgcttaaatataaagtaacatat
gatagttgcatttttatgtttatttctagaaaaaaaagaaccaaatgaat
aataaaattcatgtaagtacagaaaataggcccctatttacagtatcaca
gaactttggcatatttcttggtataagagactaaaatgattcctagagac
attcaattcatttatttgtcagcataatttgcttaatttagttattataa
tttaaacatttcaatatctgcaactgacattatgacaaggtttgatattg
cttatattaatataacgtaaaaattcattctgagttctggcagatttggg
gggaattttttcaattgtttaattcctattgttgaagcatgggaagagaa
acggaccacaacttttttcaacacatccgaaagggaatttcagcactcct
attc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107178741_107179256
seq2: B6Ng01-092E08.b_566_1073 (reverse)

seq1  CCCAACCCAACCTACTTCACCA-CACCTCCAAATGGTATCTTGTTTTTTC  49
      ||||||||||||||| |||||| |||||||||||| | |||   ||||||
seq2  CCCAACCCAACCTAC-TCACCACCACCTCCAAATGAT-TCT--GTTTTTC  46

seq1  CTCCAAAAGCCAATGTGTGCTGCCCAAACATTCCTGGGTGTGTGTTCTCC  99
      |||| |||||| |||||||||||||||||| |||||||||||||||||||
seq2  CTCC-AAAGCC-ATGTGTGCTGCCCAAACA-TCCTGGGTGTGTGTTCTCC  93

seq1  GACTGAAGAAATATTGCCTTATGAGGGGACAGACTCTGCCATTATCTGAT  149
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GACTGAAGAAATA-TGCCTTATGAGGGGACAGACTCTGCCATTATCTGAT  142

seq1  TCTGTCTCCTAGCAGTTAAAAACGCTTGTTTAAGTTACATGACCAGGATT  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTGTCTCCTAGCAGTT-AAAACGCTTGTTTAAGTTACATGACCAGGATT  191

seq1  GGGCTTGTGTGGTTTTACTGGCACTCCTGTTAATGATGGTATTTGACAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGTGTGGTTTTACTGGCACTCCTGTTAATGATGGTATTTGACAAG  241

seq1  GCCCGGATTTGCACAGGATTTTTACATACTGTTACAACCACTATGAGATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGATTTGCACAGGATTTTTACATACTGTTACAACCACTATGAGATC  291

seq1  ATATGTTTAGCTATGATGTTGATGCCCAGAAGAAAATTTTTCTTGGAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTAGCTATGATGTTGATGCCCAGAAGAAAATTTTTCTTGGAGTA  341

seq1  ATCTACCTCCTCTTACACCAGTCCCATCCACCTCTTCCATAAAAATACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCTCCTCTTACACCAGTCCCATCCACCTCTTCCATAAAAATACCT  391

seq1  GGACCTTGGAAACATGTGGGAAAATATACATGTTCCCTTTAGGGCTGAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTGGAAACATGTGGGAAAATATACATGTTCCCTTTAGGGCTGAGC  441

seq1  ATTCTGGAGAATATTAATCTATGTACTTAAACCCTTTGTGAGTCTCTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGAGAATATTAATCTATGTACTTAAACCCTTTGTGAGTCTCTGTG  491

seq1  TTAATCCTCATCTACTG  516
      |||||||||||||||||
seq2  TTAATCCTCATCTACTG  508

seq1: chr14_107075840_107077018
seq2: B6Ng01-092E08.g_68_1221

seq1  GAATTCAAATACAGCTTGTTATAGAAGGCATCTCATTTTTCTCAAGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATACAGCTTGTTATAGAAGGCATCTCATTTTTCTCAAGTCAC  50

seq1  AATATAATATATCTATATATAATATGTTAAAATATAATTAATATATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATATATCTATATATAATATGTTAAAATATAATTAATATATTATA  100

seq1  TATATGATTATATAATATATTGTATCTCCAATATATTTCACACACACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTATATAATATATTGTATCTCCAATATATTTCACACACACATA  150

seq1  TGTATTCCCATTTTCTCATAGCCATTAAATTCCAAAAGGTTTTCTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCCATTTTCTCATAGCCATTAAATTCCAAAAGGTTTTCTAGTAA  200

seq1  ATTATTATAATATCCTCAGGATATTGTTAATCTATTTTATACTACTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAATATCCTCAGGATATTGTTAATCTATTTTATACTACTTGTC  250

seq1  CATAATGTTTATTGACCTTCTTTTTCAATCTTCAAAAGTTTTGTTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTTTATTGACCTTCTTTTTCAATCTTCAAAAGTTTTGTTTTCAT  300

seq1  TTATTTTTTTTTGACGCAGGGTATAATTCTGTAGTTCACGTTCTCCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTTTGACGCAGGGTATAATTCTGTAGTTCACGTTCTCCTGGG  350

seq1  ACTCACTGTATAGACAGGCTGGTTCCAACTTTGTTATCATTCATGTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGTATAGACAGGCTGGTTCCAACTTTGTTATCATTCATGTGCTT  400

seq1  TGGGGTCATGAAGAGAGGGGATATTGGTCGGGGATATTGTACTGTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCATGAAGAGAGGGGATATTGGTCGGGGATATTGTACTGTGATTT  450

seq1  AATATTGTGTTTATGCAACTACTTCATAAGGGGCTCTGTCTTTTCCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTGTTTATGCAACTACTTCATAAGGGGCTCTGTCTTTTCCTGAC  500

seq1  ACTGAATTCAGGGTTTCCTGTCTGACATGCTTTATCCAATAGAATGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTCAGGGTTTCCTGTCTGACATGCTTTATCCAATAGAATGAATC  550

seq1  TATACACTGTTAGTTATTGTAGGCTTAAACATAAAGTAATATAGAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTGTTAGTTATTGTAGGCTTAAACATAAAGTAATATAGAATGAA  600

seq1  TATATATACTGTTAGTTATTGTAGGCTTAAATATAAAGTAATATAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACTGTTAGTTATTGTAGGCTTAAATATAAAGTAATATAGAATG  650

seq1  AATCTATATACTGTTAGTTATTATAGGCTTAAATATAAAGTAATATAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATATACTGTTAGTTATTATAGGCTTAAATATAAAGTAATATAGAA  700

seq1  TGAATCTATATACTGTTAGTTATTGTACGCTTAAATATAAAGTAACATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTATATACTGTTAGTTATTGTACGCTTAAATATAAAGTAACATAT  750

seq1  GATAGTTGCATTTTTATGTTTATTTCTAGAAAAAAAAGAACCAAATGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTGCATTTTTATGTTTATTTCTAGAAAAAAAAGAACCAAATGAAT  800

seq1  AATAAAAATTCATGTAAGTACAGAAAATAGGCCCCTATTTACAGTATCAC  850
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT-AAAATTCATGTAAGTACAGAAAATAGGCCCCTATTTACAGTATCAC  849

seq1  AGAACTTTGGCATATTTCTTGGTATAAGAGAACTAAAATGATTCCTAGAG  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAACTTTGGCATATTTCTTGGTATAAGAG-ACTAAAATGATTCCTAGAG  898

seq1  ACATTCAATTCATTTAATTTGTCAGCATTAATTTGCTTAATTTAGTGTAT  950
      ||||||||||||||| ||||||||||| |||||||||||||||||| |||
seq2  ACATTCAATTCATTT-ATTTGTCAGCA-TAATTTGCTTAATTTAGT-TAT  945

seq1  TAATAATCTAAACATTTCAATATCTGCAACTGACAATTATGACAAGGTTT  1000
      | ||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  T-ATAATTTAAACATTTCAATATCTGCAACTGAC-ATTATGACAAGGTTT  993

seq1  GAATATTGCTTAATATTAATATAAACGTAAAAATTGCATTCTGCAGTTCC  1050
      | ||||||||| |||||||||| |||||||||||| ||||||| ||||| 
seq2  G-ATATTGCTT-ATATTAATAT-AACGTAAAAATT-CATTCTG-AGTTCT  1038

seq1  TGCAGATTTGGTGGGAATGTTTTTCAATTAGTTTATATTTCCTATTTGCT  1100
       |||||||||| |||||| |||||||||| |||  || ||||||||   |
seq2  GGCAGATTTGGGGGGAAT-TTTTTCAATT-GTT--TAATTCCTATT--GT  1082

seq1  AGAAGCCTAGGTGATGAGAAACTGACCACAAACATTTTTCCAACACATCA  1150
       |||||  | | || ||||||| ||||||||   ||||| ||||||||  
seq2  TGAAGC--ATGGGAAGAGAAACGGACCACAA--CTTTTTTCAACACAT--  1126

seq1  CTGAAGTGGAAATTCTAGCACTCCTATTC  1179
      | |||  |||| ||| |||||||||||||
seq2  CCGAAAGGGAATTTC-AGCACTCCTATTC  1154