BAC Information

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BAC

Clone NameB6Ng01-092G05
Chromosome14 (Build37)
Map Location 73,438,065 - 73,640,540
singlet/doubletdoublet
Overlap geneCysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489
Downstream geneItm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092G05.bB6Ng01-092G05.g
ACCDH904162DH904163
length1,0911,060
definitionDH904162|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G05, 5' end.DH904163|Mus musculus domesticus DNA, BAC clone: B6Ng01-092G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,438,065 - 73,439,163)(73,639,466 - 73,640,540)
sequence
gaattcaccacaccaataatgggcacttcttcttaatacaaatccactaa
cccaactttattcaattataggcattttcataatgactttcaactagatg
acattgcctctaagactccacataataatacaaagaataagaaatatata
agaaagcactagtttaagctatccagagatatagaaactaattccagatg
cagcagtaatgtttcccaattttccttcagacactcgtataaaaatgtga
ctcacaaaaataattggtttattatttttaaaggcatacagtatacttga
aataaatcgtctttgtgtaactcatcactacttgtaatgaataaacacca
atacaaattcttaagtctgaagagaactagatggaacaaatataatataa
aaaatattttttgtttatatgattgtttaattctgcacttcccaaagtac
ttttgacagaacatgaatcccatgagatgctttgtcaaacagaaggctcc
catggccaagtctgcctgagaaatatagccatctcttactgccctccctt
ttgggaattcacaatgcccccagggctctgtaaaagcagaagcctggttt
agggatagtgtctctcctgttttgttttgatttgatttgttttcctcgga
aatattccttaaatagtaaaaacattctacaaccccacagaactgcctct
gttgttgtacaacttatctagagtgtgactttgatagaagagaaagggaa
catcaccctggggagatatttgatattcttatcaaccagtaagaaacata
gggagctctcacttccaggtaaacttccatttctcactgtgctggctttt
gaggtacacaagattttctttcttattctcttataagtcctggaggctac
atgtctgtactcatgttgtcaacagggctatgctttcttcaaatactgga
atggagggatcatttttgctgtctaggctctgggagataccagtaatctt
tgccagttctggtcaaagaatgtggcattccagctggtggatccactgtg
aggtgtgcttgctatagttttctatgcttccagactttcta
gaattcaaatgtttatcatttttctaaaattaaaactttgcaaaatgcct
taaattagaagaggatgtgttggaaaatgaaagttttgatgtagttggta
tttttctgtctcaaagccatgcctttgtctgttttgtataatgaaaatat
aattgtgcttagtaatttgtctttctagatttgttgctctctatgtaaag
aactatgtctttactttatacgtttaacatttttaaaggttttttttcca
cttgaaataacattttcaggcactctgtagttgatctaaagtgagagagg
aaaagaagtaaaaaaaaaaatcttagctatgtatcacattctaaaaactc
aggcacttcactgtcctggtgatttctagaccaacattcttgaaaataca
aggtttttattgtactttcaaaataatttacctagcaagataacatttca
ttagtttctttatgctaagtttttatactatatatcattttgaaattggg
tgttgcagccagaatataaatcaaaatagtaatttcaaaatatactatat
agttagataccttttcttttttatgagttgcctaaaaagataaaatgtca
tgcagaaaactgcagtagtctcttggaggaaatgctctaaaactgtgtga
ctagttcaaactggttttcttcactgtttacagtttaaggcatgataagt
acttttaatctaaaataaaatataagtgaaatctacttagtaaactattt
ccgtaaacaacatctcggttcagtataaaaccatttaacagatttctgat
taaatcatttcatgatatacaaaattttaaacgtacagatatatcacata
ttaaatcataattgcttttagacctttactttatggagtttttttttttt
atggaggaaaaaacaccttaaagtggttcagaaattaaaatggcgtgcat
acaagatagatttattttattgttaacacctcagacccactttccttaaa
tatttcctgttgagccggagagatagttcccagacccagttttcatgttg
aatcgagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73438065_73439163
seq2: B6Ng01-092G05.b_37_1127

seq1  GAATTCACCACACCAATAATGGGCACTTCTGCTTAATACAAATCCACTAA  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAATTCACCACACCAATAATGGGCACTTCTTCTTAATACAAATCCACTAA  50

seq1  CCCAACTTTATTCAATTATAGGCATTTTCATAATGACTTTCAACTAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTTTATTCAATTATAGGCATTTTCATAATGACTTTCAACTAGATG  100

seq1  ACATTGCCTCTAAGACTCCACATAATAATACAAAGAATAAGAAATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCCTCTAAGACTCCACATAATAATACAAAGAATAAGAAATATATA  150

seq1  AGAAAGCACTAGTTTAAGCTATCCAGAGATATAGAAACTAATTCCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACTAGTTTAAGCTATCCAGAGATATAGAAACTAATTCCAGATG  200

seq1  CAGCAGTAATGTTTCCCAATTTTCCTTCAGACACTCGTATAAAAATGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAATGTTTCCCAATTTTCCTTCAGACACTCGTATAAAAATGTGA  250

seq1  CTCACAAAAATAATTGGTTTATTATTTTTAAAGGCATACAGTATACTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAAAATAATTGGTTTATTATTTTTAAAGGCATACAGTATACTTGA  300

seq1  AATAAATCGTCTTTGTGTAACTCATCACTACTTGTAATGAATAAACACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCGTCTTTGTGTAACTCATCACTACTTGTAATGAATAAACACCA  350

seq1  ATACAAATTCTTAAGTCTGAAGAGAACTAGATGGAACAAATATAATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATTCTTAAGTCTGAAGAGAACTAGATGGAACAAATATAATATAA  400

seq1  AAAATATTTTTTGTTTATATGATTGTTTAATTCTGCACTTCCCAAAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTTTGTTTATATGATTGTTTAATTCTGCACTTCCCAAAGTAC  450

seq1  TTTTGACAGAACATGAATCCCATGAGATGCTTTGTCAAACAGAAGGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACAGAACATGAATCCCATGAGATGCTTTGTCAAACAGAAGGCTCC  500

seq1  CATGGCCAAGTCTGCCTGAGAAATATAGCCATCTCTTACTGCCCTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCAAGTCTGCCTGAGAAATATAGCCATCTCTTACTGCCCTCCCTT  550

seq1  TTGGGAATTCACAATGCCCCCAGGGCTCTGTAAAAGCAGAAGCCTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAATTCACAATGCCCCCAGGGCTCTGTAAAAGCAGAAGCCTGGTTT  600

seq1  AGGGATAGTGTCTCTCCTGTTTTGTTTTGATTTGATTTG-TTTCCTCGGA  649
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGGATAGTGTCTCTCCTGTTTTGTTTTGATTTGATTTGTTTTCCTCGGA  650

seq1  AATATTCCTTAAATAGT-AAAACATTCTACAACCCCACAGAACTGCCTCT  698
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATATTCCTTAAATAGTAAAAACATTCTACAACCCCACAGAACTGCCTCT  700

seq1  GTTGTTGTACAACTTATCTAGAGTGTGACTTTGATAGAAGAGAAAGGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTACAACTTATCTAGAGTGTGACTTTGATAGAAGAGAAAGGGAA  750

seq1  CATCACCCTGGGGAGATATTTGATATTTCTTATCAACCAGTAAGAAACAT  798
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATCACCCTGGGGAGATATTTGATA-TTCTTATCAACCAGTAAGAAACAT  799

seq1  AGGGAGCTCTCACTTCCAGGTAAACTTCCATTTCTCACTGTGCTGGCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCTCTCACTTCCAGGTAAACTTCCATTTCTCACTGTGCTGGCTTT  849

seq1  TGAGGTACACTAGAATTTTCTTCTTATTCTCTTAT-AGTCCTGGAGGCTA  897
      |||||||||| ||| |||  ||||||||||||||| ||||||||||||||
seq2  TGAGGTACACAAGATTTTCTTTCTTATTCTCTTATAAGTCCTGGAGGCTA  899

seq1  CATGTCTGTACTCAAGTTGTCAACAGGGCTATGCTTTCTTCAAATACTGG  947
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATGTCTGTACTCATGTTGTCAACAGGGCTATGCTTTCTTCAAATACTGG  949

seq1  AAT-GAGGGATTCATTTTTGCTGTCTAGGCTCTGGTAGATACCAGTAATC  996
      ||| |||||| |||||||||||||||||||||||| ||||||||||||||
seq2  AATGGAGGGA-TCATTTTTGCTGTCTAGGCTCTGGGAGATACCAGTAATC  998

seq1  TTTGGCAGTTCTTGGTTCAGAG-ATGTGGCATTCCAAGCTGTGTGATCCA  1045
      |||| |||||||  | ||| || |||||||||||| |||||   ||||| 
seq2  TTTGCCAGTTCT--GGTCAAAGAATGTGGCATTCC-AGCTGGTGGATCC-  1044

seq1  ACTGTGAGGGTGTTGCTTGCTATAGTTTTTCTATGTCTTCACATCATCTT  1095
      ||||||| |||| |||||||||||| |||||||||  | || |    |||
seq2  ACTGTGA-GGTG-TGCTTGCTATAG-TTTTCTATGCTTCCAGA----CTT  1087

seq1  TCTA  1099
      ||||
seq2  TCTA  1091

seq1: chr14_73639466_73640540
seq2: B6Ng01-092G05.g_69_1128 (reverse)

seq1  CTGCTCCGTGTTCAACTGTGAAAACTGTGTTCTTGGGAACTATCTCTCCG  50
      ||||||    ||||||  ||||||||| ||   |||||||||||||||||
seq2  CTGCTC--GATTCAAC-ATGAAAACTGGGT--CTGGGAACTATCTCTCCG  45

seq1  GCTCCAACAGAAAATATTTTTAAAGGAAGTTTGTGTCTGATGTGTTAAAC  100
      ||| |||||| ||||||||   ||||||   || |||||| ||||| |||
seq2  GCT-CAACAGGAAATATTT---AAGGAA-AGTGGGTCTGAGGTGTT-AAC  89

seq1  ATTAAAATATATTCTATTCTTGTATGCACGCCATTTTACTTTCTTGAACC  150
      | ||||||| | |||| ||||||||||||||||||||| |||| ||||||
seq2  AATAAAATA-AATCTA-TCTTGTATGCACGCCATTTTAATTTC-TGAACC  136

seq1  ACTTTAACGTGTTTTTTCCTCATTAAAAAAAAAAAACTCCATAAAGTTAA  200
      ||||||| |||||||||||||  |||||||||||||||||||||||| ||
seq2  ACTTTAAGGTGTTTTTTCCTCCATAAAAAAAAAAAACTCCATAAAGTAAA  186

seq1  GGTCTAAAAGCAATTATGATTTAAATAATGTGATATATCTGTACGTTTAA  250
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  GGTCTAAAAGCAATTATGATTTAA--TATGTGATATATCTGTACGTTTAA  234

seq1  AATTTTGTATATCATGAAATGATTTAATCAGAAATCTGTTAAATGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTATATCATGAAATGATTTAATCAGAAATCTGTTAAATGGTTTT  284

seq1  ATACTGAACCGAGATGTTGTTTACGG-AATAGTTTACTAAGTAGATTTCA  349
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATACTGAACCGAGATGTTGTTTACGGAAATAGTTTACTAAGTAGATTTCA  334

seq1  CTTATATTTTATTTTAGATTAAAAGTACTTATCATGCCTTAAACTGTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTTATTTTAGATTAAAAGTACTTATCATGCCTTAAACTGTAAA  384

seq1  CAGTGAAGAAAACCAGTTTGAACTAGTCACACAGTTTTAGAGCATTTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAGAAAACCAGTTTGAACTAGTCACACAGTTTTAGAGCATTTCCT  434

seq1  CCAAGAGACTACTGCAGTTTTCTGCATGACATTTTATCTTTTTAGGCAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGACTACTGCAGTTTTCTGCATGACATTTTATCTTTTTAGGCAAC  484

seq1  TCATAAAAAAGAAAAGGTATCTAACTATATAGTATATTTTGAAATTACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAAAGAAAAGGTATCTAACTATATAGTATATTTTGAAATTACTA  534

seq1  TTTTGATTTATATTCTGGCTGCAACACCCAATTTCAAAATGATATATAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTATATTCTGGCTGCAACACCCAATTTCAAAATGATATATAGT  584

seq1  ATAAAAACTTAGCATAAAGAAACTAATGAAATGTTATCTTGCTAGGTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTTAGCATAAAGAAACTAATGAAATGTTATCTTGCTAGGTAAA  634

seq1  TTATTTTGAAAGTACAATAAAAACCTTGTATTTTCAAGAATGTTGGTCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAAAGTACAATAAAAACCTTGTATTTTCAAGAATGTTGGTCTA  684

seq1  GAAATCACCAGGACAGTGAAGTGCCTGAGTTTTTAGAATGTGATACATAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCACCAGGACAGTGAAGTGCCTGAGTTTTTAGAATGTGATACATAG  734

seq1  CTAAGATTTTTTTTTTTACTTCTTTTCCTCTCTCACTTTAGATCAACTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTTTTTTTTTTACTTCTTTTCCTCTCTCACTTTAGATCAACTAC  784

seq1  AGAGTGCCTGAAAATGTTATTTCAAGTGGAAAAAAAACCTTTAAAAATGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTGAAAATGTTATTTCAAGTGGAAAAAAAACCTTTAAAAATGT  834

seq1  TAAACGTATAAAGTAAAGACATAGTTCTTTACATAGAGAGCAACAAATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGTATAAAGTAAAGACATAGTTCTTTACATAGAGAGCAACAAATCT  884

seq1  AGAAAGACAAATTACTAAGCACAATTATATTTTCATTATACAAAACAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAAATTACTAAGCACAATTATATTTTCATTATACAAAACAGAC  934

seq1  AAAGGCATGGCTTTGAGACAGAAAAATACCAACTACATCAAAACTTTCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATGGCTTTGAGACAGAAAAATACCAACTACATCAAAACTTTCAT  984

seq1  TTTCCAACACATCCTCTTCTAATTTAAGGCATTTTGCAAAGTTTTAATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACACATCCTCTTCTAATTTAAGGCATTTTGCAAAGTTTTAATTT  1034

seq1  TAGAAAAATGATATACATTTGAATTC  1075
      ||||||||||||| ||||||||||||
seq2  TAGAAAAATGATAAACATTTGAATTC  1060