BAC Information

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BAC

Clone NameB6Ng01-093E18
Chromosome14 (Build37)
Map Location 105,532,074 - 105,533,168
singlet/doubletsinglet
Overlap geneRbm26
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420
Downstream geneLOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E18.b
ACCDH904824
length1,090
definitionDH904824|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctgtagaaacagtatactcaaacttaaaagtaggctgtcttg
tgtttctcatgttacaacctctctgaatatagcttagcaattgtgacgtg
ataaagtagccttgaagaaattttccagaattattccagaagaattactg
aagttagactatacagatttctgtgttttgatttctaatgaaatcaagta
tttcttaattagtttttcatgtttattaataatatttggcaggttttatt
ttgaagaaaattacctgtgaaattttggtacatgtagaatattattttct
tttgtttttaaagatttatttattattgtatgaaagtacactgcagctga
cttgagactcaccacaagagggcgtcagatctcattacggatggttgtga
gccaccatgtgggtgctgggatttgaactcaggacctttggaagagcagt
cagtgctcttaactgcaagccatctctccagcccaaatattattttcctt
tactttttaaatataagttgtgctctgtgcagctagaataatgatagttt
tatgtcttttagattctgagacagagaagaagtattaagagtaataaggt
gcctttttgttttatcttctgatttttacaatgaaagacctgaaagtagt
ctccagatttctgcttttatgctacatcagatgttaatatattagtagct
aaaaaaataggataatatttttatttacagtctaccatctttctgaatca
tattttagctcaggaactcctaagatgttagaagcagtaatattttctct
ggggaatcatggtgcagggttacttgcttaggttttaaagaatctgttga
tacttttcagaagaaccagtcatctcatgggacttagtgacagaagtaaa
aagtagcctggcagcgctgtctatattatattactttattattgttgttc
ttgttgttcttattaaaccttacgttttaagggtttttcacttcaactat
atcatctgcttactttagtgaaaatattatctatcatgtggattataggg
tttcagaaactaaagtattgtgaaaaaccataggagagag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105532074_105533168
seq2: B6Ng01-093E18.b_41_1130 (reverse)

seq1  CTCTCTCCTTTTGTTTTATCACAATACTTTTAGTATCTAAAACACTATAA  50
      ||||||||| | ||||| ||||||||| |||||| ||| |||| ||||||
seq2  CTCTCTCCTATGGTTTT-TCACAATAC-TTTAGTTTCTGAAACCCTATAA  48

seq1  T-CACATGATAGATAATATTTTTACACTAAAAGTAAGCAGATGATTATAG  99
      | ||||||||||||||||||||  |||| ||||||||||||||| |||| 
seq2  TCCACATGATAGATAATATTTT--CACT-AAAGTAAGCAGATGA-TATA-  93

seq1  GTTGAAGTGAAAAACCCTTTAAAACGTAAGGTTTAATAAGAACAACAAGA  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTGAAGTGAAAAACCC-TTAAAACGTAAGGTTTAATAAGAACAACAAGA  142

seq1  ACAACAATAATAAAGTAATATAATATAGACAGCGCTGCCAGGCTACTTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATAATAAAGTAATATAATATAGACAGCGCTGCCAGGCTACTTTT  192

seq1  TACTTCTGTCACTAAGTCCCATGAGATGACTGGTTCTTCTG-AAAGTATC  248
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TACTTCTGTCACTAAGTCCCATGAGATGACTGGTTCTTCTGAAAAGTATC  242

seq1  AACAGATTCTTTAAAACCTAAGCAAGTAACCCTGCACCATGATTCCCCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTCTTTAAAACCTAAGCAAGTAACCCTGCACCATGATTCCCCAG  292

seq1  AGAAAATATTACTGCTTCTAACATCTTAGGAGTTCCTGAGCTAAAATATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATTACTGCTTCTAACATCTTAGGAGTTCCTGAGCTAAAATATG  342

seq1  ATTCAGAAAGATGGTAGACTGTAAATAAAAATATTATCCTA-TTTTTTAG  397
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTCAGAAAGATGGTAGACTGTAAATAAAAATATTATCCTATTTTTTTAG  392

seq1  CTACTAATATATTAACATCTGATGTAGCATAAAAGCAGAAATCTGGAGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAATATATTAACATCTGATGTAGCATAAAAGCAGAAATCTGGAGAC  442

seq1  TACTTTCAGGTCTTTCATTGTAAAAATCAGAAGATAAAAAAAAAAGGCAA  497
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  TACTTTCAGGTCTTTCATTGTAAAAATCAGAAGATAAAACAAAAAGGCAC  492

seq1  CTTATTACTCTTAATACTTCTTCTCTGTCTCAGAATCTAAAAGACATAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTACTCTTAATACTTCTTCTCTGTCTCAGAATCTAAAAGACATAAA  542

seq1  ACTATCATTATTCTAGCTGCACAGAGCACAACTTATATTTAAAAAGTAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATTATTCTAGCTGCACAGAGCACAACTTATATTTAAAAAGTAAA  592

seq1  GGAAAATAATATTTGGGCTGGAGAGATGGCTTGCAGTTAAGAGCACTGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAATATTTGGGCTGGAGAGATGGCTTGCAGTTAAGAGCACTGAC  642

seq1  TGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTC  697
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCACCCACATGGTGGCTC  692

seq1  ACAACCATCCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTCAAGTC  747
      ||||||||||||||||||||||||||||||||| ||||| ||||||||||
seq2  ACAACCATCCGTAATGAGATCTGACGCCCTCTTGTGGTGAGTCTCAAGTC  742

seq1  AGCTGCAGTGTACTTTCATACAATAATAAATAAATCTTTAAAAACAAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGTGTACTTTCATACAATAATAAATAAATCTTTAAAAACAAAAG  792

seq1  AAAATAATATTCTACATGTACCAAAATTTCACAGGTAATTTTCTTCAAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATATTCTACATGTACCAAAATTTCACAGGTAATTTTCTTCAAAA  842

seq1  TAAAACCTGCCAAATATTACTAATAAACATGAAAAACTAACTAAGAAATA  897
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  TAAAACCTGCCAAATATTATTAATAAACATGAAAAACTAATTAAGAAATA  892

seq1  CTTGATTTCATTAGAAATCAAAATACAGAAATCTGTATAGTCTAACTTCA  947
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTGATTTCATTAGAAATCAAAACACAGAAATCTGTATAGTCTAACTTCA  942

seq1  GTAATTCTTCTGGAATAATTCTGGAAAATTTCTTCAATGCTACTTTACTA  997
      ||||||||||||||||||||||||||||||||||||| |||||||||  |
seq2  GTAATTCTTCTGGAATAATTCTGGAAAATTTCTTCAAGGCTACTTTATCA  992

seq1  CGTCACAATTGCTAAGCTATATTCAGAGAGGTTGTAACATGAGAAACACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACAATTGCTAAGCTATATTCAGAGAGGTTGTAACATGAGAAACACA  1042

seq1  AGACAGCCTACTTTTAAGTCTGAGTATACTGTTTCTACATGAGAATTC  1095
      ||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  AGACAGCCTACTTTTAAGTTTGAGTATACTGTTTCTACAGGAGAATTC  1090